@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0162: (2016-03-12 )
VGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTETELACGKCTNCTRIASHNHPDVHLLEPDGASIKIDQVRALKQELSKRGMESDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLTAAGISEQKARIYASITGSVEEAKAFEESEWFSEARNVVIKLYEGIHHQGTSPLIIIQESWMPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPICTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR

Atome Classification :

(20 SA) --------.........10........20........30........40........50........60........70........80........90......-...100------------....---....-110.......120.......130.......140.......150.......160.......170.......180----..----.-...-------.190.......200-.......210---------------------.---------------......220.....----..230.......240...-....250.......260.......270.-......280.......290.......300.......310.......320.......330-------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------VGLQDELTMMQPVVMKIFSKSVRENRLSHGYLFEGTRGTGKKRTALWLAQSLFCLESTETELACGKCTNCTRIASHNHPDVHLLEPDGAS-IKIDQV-RALKQ-------------ELSK---RGME-SDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQSRLQPVTFKSLTFDSLLASLTAA----GI----S-EQK-------ARIYASITGSVEEA-KAFEESEWFS---------------------E---------------ARNVVIKLYEGIHH----QGTSPLIIIQESWMPLFK-EKDKMALGLELLLLLYRDRLHLTLDENY-EPICTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR---------
54 HHSearch 89.0921% -82 - C6 -1JR3 DPO3X_ECOLI A:[14-358] ----------TFAD-VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAAS-R-TKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAH--EPRAL-------QLLARAAEGSLRDA-LSLTDQAIASGDGQVSTQAVSAMLGT-----L---------------DDDQALSLVEAMVE----ANGERVMAL---INEAAA-RGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA----------
74 Fugue 87.2421% -71 - C6 -1JR3 DPO3X_ECOLI A:[3-368] YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITAT-PCGVCDNCREIEQGRFVDLIEIDAASRT--KVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHI----LN----E-EHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG---------------------DGQVSTQAVSAMLGTLDDDQALSLVEAMVE----ANGERVMALINEAAA--R-GIEWEALLVEMLGLLHRIAMVQLSPAAL-GNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEP
58 HHSearch 81.6218% -96 - C6 -1SXJ RFC3_YEAST C:[22-329] ---------ETLDE-VYGQNEVITTVRKFVDEGKLPH-LLFYGPPGTGKTSTIVALAREIYGKNYS--------------------NMVLELNASD-D-RGIDVVRNQIKD-------------FAST---RQIFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKL--SPNAE-------KALIELSNGDMRRV-LNVLQSCKATLDNPDEDEISDDVIYECCGA-P---------------RPSDLKAVLKSILE----DDWGTAHYT---LNKVRSAKGLALIDLIEGIVKILEDYE-------------------------LQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKA----------
57 HHSearch 80.7316% -89 - C6 -1SXJ RFC5_YEAST E:[11-351] ---------KSLNA-LSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYR--------------NVVSSPYHLEITPS----NDRIVI-QELLK-------------EVAQMEQ------RYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETK-DIL-------KRIAQASNGNLRVS-LLMLESMALNNELALKSSSPIIKP-------D---------------WIIVIHKLTRKIVKERSVNSLIECRAV---LYDLLA-HCIPANIILKELTFSLL-------------------------DVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMC----------
61 HHSearch 80.0918% -84 - C6 -1SXJ RFC2_YEAST D:[35-352] ----------NLDE-VTAQDHAVTVLKKTLKSANLPH-MLFYGPPGTGKTSTILALTKELYGPDLMK-------------------SRILELNASD-E-RGISIV-REKVKNFARLTVSKPSKHDLEN----YPC-PPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKC--DDGVL-------ERILDISAGDLRRG-ITLLQSASKGAQYLGDGKNITSTQVEELAGVV---------------PHDILIEIVEKVKS----GDFDEIKKY---VNTFMK-SGWSAASVVNQLHEYYITND-------------------------NFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQ----------
64 HHSearch 79.9127% -75 * C6 *1NJG DPO3X_ECOLI A:[20-232] ---------QTFAD-VVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGI-TATPCGVCDNCREIEQGRFVDLIEIDAAS-R-TKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAH--EPRAL-------QLLARAAEGSLRDA-LSLTDQAI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 PsiBlast_CBE 78.8233% -87 - C6 -3GLF DPO3X_ECOLI G:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 78.4533% -84 - C6 -3GLF DPO3X_ECOLI B:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49 PsiBlast_CBE 78.1733% -87 - C6 -3GLG DPO3X_ECOLI G:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATADPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 78.0933% -89 - C6 -3GLG DPO3X_ECOLI B:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATADPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 PsiBlast_CBE 78.0833% -84 - C6 -3GLF DPO3X_ECOLI I:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 77.8033% -82 - C6 -3GLI DPO3X_ECOLI B:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 77.5033% -70 - C6 -1NJF DPO3X_ECOLI A:[28-190] ------------------QEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 PsiBlast_CBE 77.4633% -79 - C6 -3GLF DPO3X_ECOLI C:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 PsiBlast_CBE 77.1533% -81 - C6 -3GLF DPO3X_ECOLI D:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47 PsiBlast_CBE 77.1333% -81 - C6 -3GLG DPO3X_ECOLI I:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATADPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 76.9133% -72 - C6 -1XXI DPO3X_ECOLI B:[24-183] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 76.7633% -72 - C6 -1XXI DPO3X_ECOLI I:[24-183] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 PsiBlast_CBE 76.7233% -68 - C6 -1NJF DPO3X_ECOLI C:[28-190] ------------------QEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 PsiBlast_CBE 76.6433% -79 - C6 -3GLF DPO3X_ECOLI H:[46-205] ---------------------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNC-ETGITATPCGVCDNCREIEQGRFVD--LIEIDAASRTKVEDT-RDLLD-------------NVQY---APAR-GRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------