@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0178: (2016-03-12 )
MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELIAKNVKKMCGNRDMNHLLGVGIAISGLVNRKKGTVIRSTMLGWENVALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGEELKEAYPTSELNDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR

Atome Classification :

(20 SA) .........10........20........30........40........50........--60-.-..-.-....70........80......-..90........100.......110.......120.....--------..130..-----..--.--..----140.......150.......160..-...--..170.---.......180.......190.......200.......210.......220.......230.......240.......250--------..----------.......260.......270..-.....280-------...-.--..-----.--------.--.290--..-----......300.......310.......320.......330.......340.-...--...350.......-.360.........370.......380.......390.......400..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMSTLTYILDDLQQEGII--LE-G-AE-T-SSTGGRRAKLVRFNKDYGFVVS-VKVEEEQLLFALTDLNAEIIENTSIPFSSEKKPEEAIELI--------AKNVKKM-----CG--N--RD----MNHLLGVGIAISGLVNRKKGTVIRS-TML--GWEN-V---ALEAMLHAHFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVGAGLGLSVVINRQIYYGAQGGAGEFGHTTIQPG----------GY----------KCHCGQKGCLEMYASEFYFRNR-GEELKE---------AYP-T--SE-----L--------N--DFH---FD-----KVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVIIVGEGLHHR-DLF--LTKID-EIASQNF-FS--GAGFETEITTTSLEDPAWLQGAALLVIHQLFQVPIYEEEQTLLR
22 HHSearch 97.0227% -99 - C1 -1Z05 ? A:[34-415] ---------DHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLI--HE-T-TVQEAISR-GRPAVGLQTNNLGWQFLS-MRLGRGYLTIALHELGGEVLIDTKIDIHEI-DQDDVLARL--------LFEIEEF-----FQ--TYAAQ----LDRVTSIAITLPGLVNSEQGIVL-Q-MPHY-NVKN-L---ALGPEIYKAT-GLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQ----------GK----------RCHCGNYGCLETVASSQAIRDQ-VTARIQ---------AGE-P--SC-----LATV-----E--EIS---IE-----DICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAK-SIL--YPSIE-QCIREQS-LP--VYHQDLKLVESRFYKQATMPGAALIKQ-----------------
46 Fugue 95.2125% -95 - C1 -1Z05 ? A:[34-429] ---------DHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLI--HETT-VQ-E-AISRGRPAVGLQTNNLGWQFLS-MRLGRGYLTIALHELGGEVLIDTKIDIHE-IDQDDVLARL--------LFEIEEF-----FQTYA--AQ----LDRVTSIAITLPGLVNSEQGIVLQM-PHY--NVKN-L---ALGPEIYKAT-GLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQ----------GK----------RCHCGNYGCLETVASSQAIRDQ-VTARIQ---------AGE-P--SC-----L--------A--TVEEISIE-----DICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAK-SIL--YPSIE-QCIREQS-LP--VYHQDLKLVESRFYKQATMPGAALIKQALYDGLLLMKVVEG---
1 PsiBlast_PDB 93.9725% -99 - C1 -1Z05 ? A:[34-413] ---------DHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLI--HE-TTVQ-E-AISRGRPAVGLQTNNLGWQFLS-MRLGRGYLTIALHELGGEVLIDTKIDIH-EIDQDDVLARL--------LFEIEEF-----FQ--TYAAQ----LDRVTSIAITLPGLVNSEQGIVLQM-PHY--NVKN-L---ALGPEIYK-ATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQ----------GK----------RCHCGNYGCLETVASSQAIRDQVTARIQA---------GEP-SCLAT-----V--------E--EIS---IE-----DICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAK-SIL--YPSIE-QCIREQS-LP--VYHQDLKLVESRFYKQATMPGAALI-------------------
21 HHSearch 87.4621%-107 - C1 -1Z6R MLC_ECOLI A:[12-402] ----------QIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLV--QE-L---------------GLVVETEAWHYLS-LRISRGEIFLALRDLSSKLVVEESQELALK-DDLPLLDRI--------ISHIDQF-----FI--RHQKK----LERLTSIAITLPGIIDTENGIVHRM-PFYE-DVKE-M---PLGEALEQHT-GVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPY----------GK----------RCYCGNHGCLETIASVDSILEL-AQLRLN---------QSM-S--SM-----LHG------Q--PLT---VD-----SLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAA-DIL--FPVIS-DSIRQQA-LP--AYSQHISVESTQFSNQGTMAGAA-LVKDAMYNGSLLIR------
24 HHSearch 85.9825%-106 - C1 -2QM1 ? A:[2-323] ------------------------------------------------------------------------------------NAMDKKIIG-IDLGGTTIKFAILTTDGVVQQKWSIETNILEDGKHIVPSI--------IESIRHR-----ID--LYNMK----KEDFVGIGMGTPGSVDIEKGTV-VG-AYNL-NWTTVQ---PVKEQIESAL-GIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPN----------GF----------DCTCGKRGCLETVSSATGVVRV-ARHLSE---------EFAGD--SE-----LKQAIDDG-Q--DVS---SK-----DVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAG-EFL--RSRVE-KYFQEFT-FP--QVRNSTKIKLAELGNEAGVIGAASLALQFS--------------
6 PsiBlast_PDB 81.2525%-107 - C1 -4IJA ? A:[25-388] ---------------NEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLV--NE-V-G-------GGRKPILLKVNHLYGYFIS-L-----DLTYSSVEVMYNYFDGNVIKHESYDLPDEKVSSI--------LSIIKKH-----ID--I--QEKLDTYNGLLGVSVSIHGVVDNEQHV-----TY------G-I---SIAKKI-KEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKV----------SD----------NVEIFHK-IEDIFSQEALLHNL-SNQLNE---------KMT-L--SK-----L--------I--QFY---NE-----K--------NPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYI------NC-PLFNEMPEIL-EAIKNQF-KQ--YSRNEIQIKLTSNVKFATLLGGTLAIIQKVLQI-----------
2 PsiBlast_PDB 80.0721% -95 - C1 -1Z6R MLC_ECOLI A:[12-390] ----------QIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQEL-----------------GLVVETEAWHYL-S-LRISRGEIFLALRDLSSKLV----VEESQELALKDDLPLL--------DRIISHIDQFFIRH--Q--KK----LERLTSIAITLPGIIDTENGIVHRM-PF----YED-VKEMPLGEALEQHT-GVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPY----------GK----------RCYCGNHGCLETIASVDSILEL-AQLRLN---------QSM-S--SM-----L--------HGQPLT---VD-----SLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAA-DIL--FPVIS-DSIRQQA-LP--AYSQHISVESTQFSNQGTMAGAALV-------------------
23 HHSearch 78.5820%-107 - C1 -2HOE ? A:[22-378] ----------------ISRILKRIM-KSPVSRVELAEELGLTKTTVGEIAKIFLEKGIV--VE-E-KDSP------RPTKSLKISPNCAYVLG-IEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVM--------YRIIDRA-----KD--MMEKL----GSKLSALTVAAPGPIDTER-GIIID-PRNF-PLSQ-I---PLANLLKEKY-GIEVWVENDADMGAVGEKWYTK--RDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNG----------N----------------EYVFLEDVCNENVVLKH-VLS---------------------------------------MG---FS------LAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELG-ENF--LKKIK-IEVETHL-LY---K-HSVDMSFSKVQEPVIAFGAAVHALENYLERVT---------
32 HHSearch 77.6223% -93 - C1 -3VGL ? A:[2-313] ----------------------------------------------------------------------------------------GLTIG-VDIGGTKIAAGVVDEEGRILSTFKVATPP--TAEGIVDAI--------CAAVAGA-----S-------E----GHDVEAVGIGAAGYVDDKR-ATVLF-APNI-DWRH-E---PLKDKVEQRV-GLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPD----------GL----------LCGCGSQGCWEQYASGRALVRY-AKQRAN---------ATP-ENAAV-----LLGLGDGSVD--GIE---GK-----HISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEG-ELV--LDPIR-KSFRRWL-IGG-EWRPHAQVLAAQLGGKAGLVGAADLARQG---------------
34 HHSearch 74.4823%-101 * C1 *2AA4 NANK_ECOLI A:[1-288] ----------------------------------------------------------------------------------------MTTLA-IDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDAL--------SALVSPL------------------QAHAQRVAIASTGIIRDGS-LLALNPHNLG-GLLH-F---PLVKTLEQLT-NLPTIAINDAQAAAWAEFQALD-GDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPH----------GP----------VCGCGRTGCVEAIASGRGIAAA-AQGELA-----------------------------------GAD---AK-----TIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGLA--EGY--LALVE-TYLAQEP-A----A-FHVDLLAAHYRHDAGLLGAALLAQG----------------
26 HHSearch 73.7321%-105 - C1 -2AP1 NAGK_SALTY A:[23-326] --------------------------------------------------------------------------------------NA-MYYG-FDIGGTKIALGVFDSTRRLQWEKRVPTPHT-SYSAFLDAV--------CELVEEA-----DQ------R----FGVKGSVGIGIPGMPETEDGTLY-A-ANVP-AASG-K---PLRADLSARL-DRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLR----------RCGCGQMGCIENYLSGRGFAWL-YQHYYD---------Q-------------------------SLQ---AP-----EIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNF--TAI--TTQLA-ERLPRHL-LP---VARAPRIERARHGDAGGMRGAAFLHLT----------------
11 PsiBlast_PDB 72.7225% -87 - C1 -4DB3 NAGK_VIBVU A:[27-325] ---------------------------------------------------------------------------------------YGFDVGGTKIE-----FGAFNEKLERVATERVPTPTDDYPL-LLETI--------AGLVAKY---------D--QE----FACEGKIGLGLPGMEDADDATVLTV-NVP--AAKG-K---PLRADLEAKI-GRSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLD----------AWFHLGDNAPLLGCGCGKKGCLDSYLS-----GR-GFELLY---------AHY-Y--GE-----------------EKK---AI-----DIIKANAAGDEKAAEHVERFMELLAICFGNIFTANDPH-VVALGGGLSNF-ELI--YEEMP-KRVPKYL-LS--VAKC-PKIIKAKHGDSGGVRGAAFLNI-----------------
37 HHSearch 72.1220%-105 - C1 -2GUP ? A:[4-290] ----------------------------------------------------------------------------------------MTIAT-IDIGGTGIKFASLTPDGKILDKTSISTPE--N----LEDL--------LAWLDQR-----L-------S----EQDYSGIAMSVPGAVNQETGVIDGF-SAVP-YIHG-F---SWYEALS-SY-QLPVHLENDANCVGLSELLAHP--ELENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAP-------------------------AEKLNNWSQLASTGNMVRY-VIEKSG---------H----------------------T--DWD---GR-----KIYQEAAAGNILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSISQN--PDF--IQGVK-KAVEDFV-DAYEEYTVAPVIQACTYHADANLYGALVNWLQEEK-------------
3 PsiBlast_PDB 71.5031% -90 - C1 -2YHY A:[33-292] -------------------------------------------------------------------------------------------LA-VDLGGTNLRVAIVSMKGEIVKKYT-QFNP-KTYEERINLILQMCVEAAAEAVKLN-----C--------------RILGVGISTGGRVNPREGIVLHS-TKLIQEWNS-V---DLRTPLSDTL-HLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLD----------GP----------DCSCGSHGCIEAYASGMALQRE-AKKLHDEDLLLVEGMS--------A----V--------G--ALH---L--------IQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSG--------------------------------------------------------------------------
31 HHSearch 70.1421%-109 - C1 -3VOV ? A:[1-300] ----------------------------------------------------------------------------------------MKVVG-LDLGGTKIAAGVFDG-KRLLSKVVVPTPKE-GGERVAEAL--------AEAAERA-----ER--E---A----GVRGEAIGLGTPGPLDFRRGVIR----NIP-GVQD-F---PIRRILEEAT-GRPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLLPG----------GP----------ACGCGLEGCLEALAAGRALERD-ATYAFQ---------R-------------------------PVD---TR-----ELFRLFQAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVALNAPEGY--WEALL-EAYRRYL--Q---GWEAPPLRRARLGAEAGLLGAALTAYLEVKDG-----------
5 PsiBlast_PDB 70.0330% -82 - C1 -2QM1 ? A:[62-321] --------------------------------------------------------------------------------------------------------------------------------------------------------------N--MK----KEDFVGIGMGTPGSVDIEKGTVVGA-YNL--NWTT-V---QPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPN----------GF----------DCTCGKRGCLETVSSATGVVRV-ARHLSE---------EFAGD--SE-----LKQAIDDG-Q--DVS---SK-----DVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVI-GGGVSAA-GEF--LRSRV-EKYFQEFTFP--QVRNSTKIKLAELGNEAGVIGAASLALQ----------------
4 PsiBlast_PDB 68.8931% -87 - C1 -2YI1 A:[33-292] -------------------------------------------------------------------------------------------LA-VDLGGTNLRVAIVSMKGEIVKKYT-QFNP-KTYEERINLILQMCVEAAAEAVKLN-----C--------------RILGVGISTGGRVNPREGIVLHS-TKLIQEWNS-V---DLRTPLSDTL-HLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLD----------GP----------DCSCGSHGCIEAYASGMALQRE-AKKLHDEDLLLVEGMS--------A----V--------G--ALH---L--------IQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSG--------------------------------------------------------------------------
10 PsiBlast_PDB 68.5421% -84 - C1 -2HOE ? A:[31-367] --------------------------KSPVSRVELAEELGLTKTTVGEIAKIFLEKGIV--VE-E-KD-S-P----RPTKSLKISPNCAYVLG-IEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIIDR--AKDMMEK-----LG--S--K--------LSALTVAAPGPIDTERGIIIDP-RNF--PLSQ-I---PLANLLKEKY-GIEVWVENDADMGAVGEKWY--TKRDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNG------------------------------------NEYVFLE---DVCNE---------NVV-L--KH-----V--------L--SMG---FS------LAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELG-ENF--LKKIKIEVETHLL-YK--HS---VDMSFSKVQEPVIAFGAAV--------------------
9 PsiBlast_PDB 65.5923% -88 - C1 -3VGM ? A:[2-273] ----------------------------------------------------------------------------------------GLTIG-VDIGGTKIAAGVVDEEGRILSTFKV-----ATPPTAEGIV--------DAICAAV-----AG--A--SE----GHDVEAVGIGAAGYVDDKRATVLFA-PNI--DWRH-E---PLKDKVEQRV-GLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPD----------GL----------LCGCGSQGCWEQYASGRALVRY-AKQRAN---------ATP-E--NAAVLLGL--------G--DGS---VDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEG-ELV--LDPI----------------------------------------------------------
8 PsiBlast_PDB 64.7723% -76 - C1 -3VGL ? A:[2-273] ----------------------------------------------------------------------------------------GLTIG-VDIGGTKIAAGVVDEEGRILSTFKV-----ATPPTAEGIV--------DAICAAV-----AG--A--SE----GHDVEAVGIGAAGYVDDKRATVLFA-PNI--DWRH-E---PLKDKVEQRV-GLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPD----------GL----------LCGCGSQGCWEQYASGRALVRY-AKQRAN---------ATP-E--NAAVLLGL--------G--DGS---VDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEG-ELV--LDPI----------------------------------------------------------