@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0188: (2016-03-13 )
MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK

Atome Classification :

(22 SA) .........10........20........30........40........50........60........70........80..------......90-..---.---......100.......110.......120.--......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240-----------------.......-..250----------------..--.---------------------......260...-----...--.270.......280.......290...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLL------PILDDTL--SA---Y---NNVKVVHGDVLKADVEEVIAEQFAKPELPL--KIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTL-------------------WNNLASK-FPA------------------LK--P---------------------RKDELVEGLNAI-----GID--LIRRGETLDIPEFAKLSNFLGDFLKEK
48 HHSearch 89.2636%-109 * C2 *3GRU RSMA_METJA A:[30-291] ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNK---------LDFN--KVVANLPYQISSPITFKLIKRG--FDLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKYH-IENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEMKKILEDFLNTNSEIKNLINEKVFKLSVKDIVNLSNEFYRFLQN-
22 PsiBlast_CBE 88.8337%-111 - C2 -3FUX RSMA_THET8 B:[5-267] -----ASPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLR------PVLEETL--SG---L---P-VRLVFQDALLYPWEEV-------PQGSL---LVANLPYHIATPLVTRLLKTGRFA-RLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLT----PTGALDDPG-LFRLVEAAFGKRRKTL-------------------LNALAAAGYP----------------------------------------------KARVEEALRAL-----GLP--PRVRAEELDLEAFRRLREGL-------
3 PsiBlast_PDB 88.2337%-111 - C2 -3FUX RSMA_THET8 A:[5-267] -----ASPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLR------PVLEETL--SG---L---P-VRLVFQDALLYPWEEV-------PQGSL---LVANLPYHIATPLVTRLLKTGRFA-RLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLT----PTGALDDPG-LFRLVEAAFGKRRKTL-------------------LNALAAAGYP----------------------------------------------KARVEEALRAL-----GLP--PRVRAEELDLEAFRRLREGL-------
1 PsiBlast_PDB 88.0637%-111 - C2 -3FUU RSMA_THET8 A:[6-267] ------SPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLR------PVLEETL--SG---L---P-VRLVFQDALLYPWEEV-------PQGSL---LVANLPYHIATPLVTRLLKTGRFA-RLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLT----PTGALDDPG-LFRLVEAAFGKRRKTL-------------------LNALAAAGYP----------------------------------------------KARVEEALRAL-----GLP--PRVRAEELDLEAFRRLREGL-------
2 PsiBlast_PDB 88.0337%-111 - C2 -3FUW RSMA_THET8 A:[6-267] ------SPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLR------PVLEETL--SG---L---P-VRLVFQDALLYPWEEV-------PQGSL---LVANLPYHIATPLVTRLLKTGRFA-RLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLT----PTGALDDPG-LFRLVEAAFGKRRKTL-------------------LNALAAAGYP----------------------------------------------KARVEEALRAL-----GLP--PRVRAEELDLEAFRRLREGL-------
21 PsiBlast_CBE 87.2737%-110 - C2 -3FUX RSMA_THET8 C:[4-267] ----LASPQSVRALLERHGLFADKRFGQNFLVSEAHLRRIVEAAR-PFTGPVFEVGPGLGALTRALLEAGAEVTAIEKDLRLR------PVLEETL--SG---L---P-VRLVFQDALLYPWEEV-------PQGSL---LVANLPYHIATPLVTRLLKTGRFA-RLVFLVQKEVAERMTARPKTPAYGVLTLRVAHHAVAERLFDLPPGAFFPPPKVWSSLVRLT----PTGALDDPG-LFRLVEAAFGKRRKTL-------------------LNALAAAGYP----------------------------------------------KARVEEALRAL-----GLP--PRVRAEELDLEAFRRLREGL-------
54 HHSearch 83.7530%-107 - C2 -1ZQ9 DIM1_HUMAN A:[8-280] ---------------------------QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLV------AELHKRV--QGTPVA---SKLQVLVGDVLKTDL-----------PFFD--TCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIEPKNPPP--PINFQEWDGLVRITFVRKNKTL-------------------SAAFKSS-AVQQLLEKNYRIHCSVHNIIIPEDFS---------------------IADKIQQILTST-----GFS---DKRARSMDIDDFIRLLHGFNAE----
10 PsiBlast_PDB 80.8436%-116 - C2 -3FYD RSMA_METJA A:[1-219] ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
53 HHSearch 80.8032%-115 - C2 -1QYR - RSMA_ECOLI A:[17-267] ---------------------------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLA------ARLQTHP--FL---G---PKLTIYQQDAMTFNFGELAEK----MGQPL--RVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTI-------------------RNSLGNL-FS--------------------------------------------------VEVLTGM-----GID--PAMRAENISVAQYCQMANYLAEN----
7 PsiBlast_PDB 80.6537%-113 - C2 -3GRV RSMA_METJA A:[30-248] ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
6 PsiBlast_PDB 80.3737%-114 - C2 -3GRU RSMA_METJA A:[30-248] ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
11 PsiBlast_PDB 80.1736%-117 - C2 -3FYC RSMA_METJA A:[2-221] --------------------------AQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
23 PsiBlast_CBE 80.0232%-122 - C2 -3TPZ RSMA_ECOLI B:[8-266] ------------------GHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKL--TI---Y---QQ------DAMTFNFGE-LAEKMGQP---L--RVFGNPPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTI-------------------RNSLGNL-FS--------------------------------------------------VEVLTGM-----GID--PAMRAENISVAQYCQMANYLAE-----
24 PsiBlast_CBE 79.9336%-118 - C2 -3FYC RSMA_METJA B:[2-221] --------------------------AQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAKEGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
5 PsiBlast_PDB 79.4437%-112 - C2 -3GRR RSMA_METJA A:[30-248] ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
8 PsiBlast_PDB 79.2837%-118 - C2 -3GRY RSMA_METJA A:[30-248] ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLE------PYANKLK--EL---Y---NNIEIIWGDALKVDLNKLDFN-----------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSV-------------------RKALIDS-SKE------------------LN--Y---------------------NKDEM--------------------------------------------
50 HHSearch 79.2527%-106 - C2 -2H1R - ? A:[2-272] ----------------------------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMI------SEVKKRC--LYEG-Y---NNLEV----AIKTVFP-----------KFD--VCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSF--LTNFDEWDNLLRICFSRKRKTL-------------------HAIFKRN-AV--------------------L--NMLEHNYKNWCTLNKQVPVNFPFKKYCLDVLEHL-----DM---CEKRSINLDENDFLKLLLEFNKKG---
12 PsiBlast_PDB 77.8731%-120 - C2 -1QYR - RSMA_ECOLI A:[17-266] ---------------------------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKL--TI---Y---QQ------DAMTFNFGE-LAEKMGQP---L--RVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTI-------------------RNSLGNL-FS--------------------------------------------------VEVLTGM-----GID--PAMRAENISVAQYCQMANYLAE-----
13 PsiBlast_PDB 77.7031%-120 - C2 -4ADV - RSMA_ECOLI V:[17-266] ---------------------------QNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKL--TI---Y---QQ------DAMTFNFGE-LAEKMGQP---L--RVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAFNQRRKTI-------------------RNSLGNL-FS--------------------------------------------------VEVLTGM-----GID--PAMRAENISVAQYCQMANYLAE-----
19 PsiBlast_PDB 77.5527%-112 - C2 -2H1R - ? A:[2-264] ----------------------------HLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMI------SEVKKRCLYEG---Y---NNLEV----AIKT--------VFPKFDV-----CTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLIPKESSFLTNFDE--WDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQ-VPV------------------NF--P---------------------FKKYCLDVLEHL-----DM---CEKRSINLDENDFLKL-----------
20 PsiBlast_PDB 74.4032%-125 - C2 -1ZQ9 DIM1_HUMAN A:[8-210] ---------------------------QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLV------AELHKRV--QG---TPVASKLQVLVGDVLKTD-------------LPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIE-PKNPPPPINFQE-WDGLVRITFVRKNKTL---------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 73.4732%-121 - C2 -1ZQ9 DIM1_HUMAN B:[8-210] ---------------------------QHILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLV------AELHKRV--QG---TPVASKLQVLVGDVLKTD-------------LPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLYCRLSINTQLLARVDHLMKVGKNNFRPPPKVESSVVRIE-PKNPPPPINFQE-WDGLVRITFVRKNKTL---------------------------------------------------------------------------------------------------------------------------