@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0235: (2016-03-13 )
MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADNRCSKVIVVCQEEERKHVKELMSQLNVAEHRIEIVKGGSERQYSVAAGLERCGTGRVVLVHDGARPFITLDIIDRLLIGVEQSKAAICAVKVKDTVKRVMNGVVQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLGTDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND

Atome Classification :

(28 SA) --.........10........20........30........40..-......50........60........70..-.....-.80........90..-...-----...--100.......110.......120-.--....-.-.130..-......140--..-.--.-...150.......160.......170.......180..--.....190.......200.......210.......220.......230
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLAD-NRCSKVIVVCQEEERKHVKELMSQLNVAEH-RIEIV-KGGSERQYSVAAGLE-RCG-----TGR--VVLVHDGARPFITLDIIDRLLIG-V--EQSK-A-AIC-AV-KVKDTVKRV--MN-G--V-VQETVDRENLWQVQTPQAFELPILRKAHQLARKEQFLG--TDEASLVERIPCPVAIVQGSYYNIKLTTPEDMPLAKAILGELGGIAND
3 PsiBlast_PDB 92.1135%-136 - C1 -2YC3 ISPD_ARATH A:[7-226] ------VILLAGGQG-------PKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV----DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
30 HHSearch 90.9935%-128 - C1 -2YC3 ISPD_ARATH A:[3-226] --KSVSVILLAGGQG-------PKQYIPLLGQPIALYSFFTFSRMPE-VKEIVVVCDPFFRDIFEEYEESI---DV-DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKDGS---AVG-A-AVL-GV-PAKATIKEV--NS-D--SLVVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
9 PsiBlast_PDB 88.4137%-111 - C1 -1I52 ISPD_ECOLI A:[11-227] -------VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAH-PRVKRVVIAISPGDSR-----FAQLPLANHPQITVV-DGGDERADSVLAGLK-AAG-----DAQ--WVLVHDAARPCLHQDDLARLLAL-S--ETSRTG-GIL-AA-PVRDTMKRA--EP-GKNA-IAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI--TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYL---------
29 HHSearch 88.3535%-102 - C1 -1I52 ISPD_ECOLI A:[6-229] --LDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPR-VKRVVIAISPGDS-RFAQLPLA-N--HP-QITVV-DGGDERADSVLAGLK-AAG-----DAQ--WVLVHDAARPCLHQDDLARLLALSE--TSRT-G-GIL-AA-PVRDTMKRA--EPGK--NAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI--TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
11 PsiBlast_PDB 88.3036%-103 - C1 -2XWL ? A:[2-218] ---ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRAS-GVIDRIVIAVPPALTDE-----SKLVFGGE-DSVIV-SGGVDRTESVALALE-AAG-----DAE--FVLVHDAARALTPPALIARVVAA-L--KEGH-S-AVVPGL-APADTIKAVD-AN-G--A-VLGTPERAGLRAVQTPQGFHADVLRRAY--ARATAGGV--TDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL---------
53 Fugue 88.0436%-108 - C1 -1I52 ISPD_ECOLI A:[5-229] -HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAH-PRVKRVVIAISPGDSRFAQLPLANHP-----QITVV-DGGDERADSVLAGLK-AAG-----DAQ--WVLVHDAARPCLHQDDLARLLAL-S--ETSR-TGGIL-AA-PVRDTMKRA--EP-GKNA-IAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI--TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTR-------
10 PsiBlast_PDB 87.7537%-113 - C1 -1INI ISPD_ECOLI A:[11-227] -------VVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAH-PRVKRVVIAISPGDSR-----FAQLPLANHPQITVV-DGGDERADSVLAGLK-AAG-----DAQ--WVLVHDAARPCLHQDDLARLLAL-S--ETSRTG-GIL-AA-PVRDTMKRA--EP-GKNA-IAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI--TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYL---------
24 PsiBlast_CBE 87.7436% -99 - C1 -2XWL ? B:[2-218] ---ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRAS-GVIDRIVIAVPPALTDE-----SKLVFGGE-DSVIV-SGGVDRTESVALALE-AAG-----DAE--FVLVHDAARALTPPALIARVVAA-L--KEGH-S-AVVPGL-APADTIKAVD-AN-G--A-VLGTPERAGLRAVQTPQGFHADVLRRAY--ARATAGGV--TDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL---------
12 PsiBlast_PDB 87.2036%-103 - C1 -2XWM ? A:[2-218] ---ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRAS-GVIDRIVIAVPPALTDE-----SKLVFGGE-DSVIV-SGGVDRTESVALALE-AAG-----DAE--FVLVHDAARALTPPALIARVVAA-L--KEGH-S-AVVPGL-APADTIKAVD-AN-G--A-VLGTPERAGLRAVQTPQGFHADVLRRAY--ARATAGGV--TDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL---------
4 PsiBlast_PDB 86.8435%-139 - C1 -2YC5 ISPD_ARATH A:[7-225] ------VILLAG--------SMPKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV----DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS--------
6 PsiBlast_PDB 86.3335%-145 - C1 -4NAL ISPD_ARATH A:[7-226] ------VILLAGG---------PKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV----DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVKT----TLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
52 Fugue 85.2735%-104 * C1 *1INI ISPD_ECOLI A:[4-228] THLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAH-PRVKRVVIAISPGDSRFAQLPLAN----HP-QITVV-DGGDERADSVLAGLK-AAG-----DAQ--WVLVHDAARPCLHQDDLARLLAL-S--ETSR-TGGIL-AA-PVRDTMKRAEPGK-N--A-IAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI--TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLT--------
35 HHSearch 84.9433%-114 - C1 -1VPA ISPD_THEMA A:[13-231] ---MNVAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEA-IDGVVIVTRREWFEVVEKRVFH----EK-VLGIV-EGGDTRSQSVRSALE-FLEKF---SPS--YVLVHDSARPFLRKKHVSEVLRRAR---ETG-A-ATL-AL-KNSDALVRV--EN----D-RIEYIPRKGVYRILTPQAFSYEILKKAHEN----GGEW--ADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIAREWE-----
1 PsiBlast_PDB 84.9336%-134 - C1 -1W77 ISPD_ARATH A:[7-226] ------VILLAGG-------SMPKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV-DL-RFAI---PGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VV------TLWEMQTPQVIKPELLKKGFELVKSEGLEV--T-DVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
21 PsiBlast_CBE 84.8537%-115 - C1 -3N9W ISPD_ECOLI B:[10-226] -------VVPAAG----------KQYLSIGNQTILEHSVHALLAH-PRVKRVVIAISPGDSR-----FAQLPLANHPQITVV-DGGDERADSVLAGLK-AAG-----DAQ--WVLVHDAARPCLHQDDLARLLAL-S--ETSRTG-GIL-AA-PVRDTMKRA--EP-GKNA-IAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATI--TDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYL---------
5 PsiBlast_PDB 84.7835%-147 - C1 -4NAK ISPD_ARATH A:[7-224] ------VILLAGG---------PKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV----DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVK-----TLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL---------
2 PsiBlast_PDB 83.8736%-132 - C1 -4NAI ISPD_ARATH A:[7-226] ------VILLAG----------PKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV-DL-RFAI---PGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVKTLDRKTLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
8 PsiBlast_PDB 83.5835%-143 - C1 -2YCM ISPD_ARATH A:[6-225] ------VILLAG---------MPKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV----DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVKTL---TLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILSE-------
32 HHSearch 83.4835%-105 - C1 -2XWL ? A:[2-221] ---ATVAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRAS-GVIDRIVIAVPPALTDESKLVFG------G-EDSVIVSGGVDRTESVALALE-AAG-----DAE--FVLVHDAARALTPPALIARVVAALK--EGHS-A-VVP-GL-APADTIKAV--DA-N--GAVLGTPERAGLRAVQTPQGFHADVLRRAYARATAGG--V--TDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAHH------
7 PsiBlast_PDB 83.4035%-148 - C1 -4NAN ISPD_ARATH A:[7-224] ------VILLAG----------PKQYIPLLGQPIALYSFFTFSRM-PEVKEIVVVCDPFFRDIFEEYEESIDV----DLSFA-IPGKERQDSVYSGLQ-EIDV----NSE--LVCIHDSARPLVNTEDVEKVLKD-G--SAVG-A-AVL-GV-PAKATIKEVN-SD-S--L-VVK-----TLWEMQTPQVIKPELLKKGFELVKSEGLEV--TDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL---------
25 PsiBlast_CBE 83.2232%-119 - C1 -1VPA ISPD_THEMA B:[17-229] -------ILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKS-EAIDGVVIVT----RREWFEVVEKRVFHEK-VLGIV-EGGDTRSQSVRSALE-FLEKF---SPS--YVLVHDSARPFLRKKHVSEVLRR-A--RETG-A-ATL-AL-KNSDALVRV--EN-D--R-I-EYIPRKGVYRILTPQAFSYEILKKAHENGGE----W--ADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIARE-------
14 PsiBlast_PDB 80.8232%-115 - C1 -1VPA ISPD_THEMA A:[17-229] -------ILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKS-EAIDGVVIVT----RREWFEVVEKRVFHEK-VLGIV-EGGDTRSQSVRSALE-FLEKF---SPS--YVLVHDSARPFLRKKHVSEVLRR-A--RETG-A-ATL-AL-KNSDALVRV--EN-D--R-I-EYIPRKGVYRILTPQAFSYEILKKAHENGGE----W--ADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIARE-------
17 PsiBlast_PDB 76.0432%-108 - C1 -3Q7U ISPD_MYCTU A:[14-229] ----------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDS-GVVDTVVVAVPADRTDEARQILG------H-RAMIV-AGGSNRTDTVNLALTVLSG-----TAEPEFVLVHDAARALTPPALVARVVEA-L--RDGY-A-AVV-PVLPLSDTIKAVD-AN-G--V-VLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLD----EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
18 PsiBlast_PDB 75.8332%-108 - C1 -3Q80 ISPD_MYCTU A:[14-229] ----------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDS-GVVDTVVVAVPADRTDEARQILG------H-RAMIV-AGGSNRTDTVNLALTVLS--------EPEFVLVHDAARALTPPALVARVVEA-L--RDGY-A-AVV-PVLPLSDTIKAVD-AN-G--V-VLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSL-----EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
28 PsiBlast_CBE 74.5932%-103 - C1 -2XWN ISPD_MYCTU B:[14-229] ----------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDS-GVVDTVVVAVPADRTDEARQILG------H-RAMIV-AGGSNRTDTVNLALTVLSG-----TAEPEFVLVHDAARALTPPALVARVVEA-L--RDGY-A-AVV-PVLPLSDTIKAVD-AN-G--V-VLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
13 PsiBlast_PDB 73.9837% -93 - C1 -4ZDQ ISPD_BURTA A:[17-234] -----------AGTGSRSGSALPKQYRTLAGRALLHYTLAAFDAC-SEFAQTLVVISPDDAHFDARRFAGLRFAVR-RC-----GGASRQASVMNGLI-QLAEFGATDAD--WVLVHDAARPGITPALI-RTLIG-ALKDDPV-G-GIV-AL-PVADTLKRV--PA-GGDA-IERTESRNGLWQAQTPQMFRIGMLRDAIQRAQLEGRDL--TDEASAIEWAGHTPRVVQGSLRNFKVTYPEDFDLAEAIL---------
26 PsiBlast_CBE 73.2132%-109 - C1 -3Q80 ISPD_MYCTU B:[14-229] ----------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDS-GVVDTVVVAVPADRTDEARQILG------H-RAMIV-AGGSNRTDTVNLALTVL---------EPEFVLVHDAARALTPPALVARVVEA-L--RDGY-A-AVV-PVLPLSDTIKAVD-AN-G--V-VLGTPERAGLRAVQTPQGFTTDLLLRSYQR----LPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------
27 PsiBlast_CBE 72.2132%-101 - C1 -3Q7U ISPD_MYCTU B:[14-229] ----------AAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDS-GVVDTVVVAVPADRTDEARQILG------H-RAMIV-AGGSNRTDTVNLALTVLSG-----TAEPEFVLVHDAARALTPPALVARVVEA-L--RDGY-A-AVV-PVLPLSDTIKAVD-AN-G--V-VLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV---------