@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0256: (2016-03-13 )
LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVDFGSKLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDNVTANDYQAIISNPPIRAGKKIVHAILEGAYDHLQETGELWIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN

Atome Classification :

(20 SA) --------------------------------------.........10........20........30........40...-..---------...50....--...-----.60--.-------........70........80.......-.90........100....---...--110...--......120-.--.--.-....130...-------------..------------------------.------------------------.----140----------------..----.----......150.----......160.......170.....-.----.---180-.......---..190.......200
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------------------LTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVD-FG---------SKLLIESFE--LET-----KI---G-------KILDVGCGYGPMGLTVAKAFPDSQIEM-VDVNLRALELAKENAEIN---KIT--N--THI--YESSVYDNV-T--A--N-DYQAIISNPP-------------IR------------------------A------------------------G----K------------------KI----V----HAILEGAYDH----LQETGELWIVIQKKQGGPSAEKKM-E----E---V---FGNVETV---AKDKGYFIFKSVKN
45 HHSearch 79.0526% -68 - C1 -3DMG ? A:[197-372] -----------------------------------------------------------------EYTFHHLPGVFSAGKVD-PA---------SLLLLEALQ--ERLGPEGVRG---R-------QVLDLGAGYGALTLPLARMG--AEVVG-VEDDLASVLSLQKGLEAN---AL---K--AQA--LHSDVDEALTE--E--A-RFDIIVTNPP-------------FH------------------------V------------------------GGAVIL------------------DV----A----QAFVNVAAAR----LRPGGVFFLVSNPFLKY---EPLL-E----E---K---FGAFQTL---K-VAEYKVLFAEK-
3 PsiBlast_PDB 78.8524% -72 - C1 -4DCM RLMG_ECOLI A:[185-367] --------------------------------------------------------SWK--LEGTDWTIHNHANVFSRTGLD-IG---------ARFFMQHLP---EN-----LE---G-------EIVDLGCGNGVIGLTLLDKNPQAKVVF-VDESPMAVASSRLNVETNMPEALD--R--CEF--MINNALSGV-E--P--F-RFNAVLCNPP-------------F-------------------------------------------------------------------------------------DNVAWEMFHHARRCLKINGELYIVANRHL---DYFHKL-K----K---I---FGNCTTI---ATNNKFVVLKAVK-
43 HHSearch 75.8245% -27 * C1 *1DUS - Y882_METJA A:[11-196] ---------------------------------------------------KSDVKIVEDILRGKKLKFKTDSGVFSYGKVD-KG---------TKILVENVV--VD------KD---D-------DILDLGCGYGVIGIALADEV--KSTTM-ADINRRAIKLAKENIKLN---NLDNYD--IRV--VHSDLYENV-K--D--R-KYNKIITNPP-------------IR------------------------A------------------------G----K------------------EV----L----HRIIEEGKEL----LKDNGEIWVVIQTKQGAKSLAKYM-K----D---V---FGNVETV---TIKGGYRVLKSKK-
1 PsiBlast_PDB 75.5741% -25 - C1 -1DUS - Y882_METJA A:[4-196] --------------------------------------------FSEKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVD-KG---------TKILVENVV--VD------KD---D-------DILDLGCGYGVIGIALADEVKSTT--M-ADINRRAIKLAKENIKLN---NLD--NYDIRV--VHSDLYENV-K--D--R-KYNKIITNPP-------------IR------------------------A------------------------G----K------------------EV----L----HRIIEEGKEL----LKDNGEIWVVIQTKQGAKSLAKYM-K----D---V---FGNVETV---TIKGGYRVLKSKK-
11 PsiBlast_PDB 75.0024% -75 - C1 -2ZWV ? A:[187-360] -------------------------------------------------------RAFSARILGAEYTFHHLPGVFSAGKVD-PA---------SLLLLEA----LQE-----RL---GPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVG-VEDDLASVLSLQKGLEAN---ALK--A--QAL--H-SDVDEAL-T--E--EARFDIIVTNPP-------------FH------------------------V------------------------G----G------------------AV----ILDVAQAFVNVAAAR----LRPGGVFFLVSNPFL---KYEPLL-E----E---K---FGAFQTL-----------------
10 PsiBlast_PDB 74.3724% -76 - C1 -2ZUL ? A:[187-360] -------------------------------------------------------RAFSARILGAEYTFHHLPGVFSAGKVD-PA---------SLLLLEA----LQE-----RL---GPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVG-VEDDLASVLSLQKGLEAN---ALK--A--QAL--H-SDVDEAL-T--E--EARFDIIVTNPP-------------FH------------------------V------------------------G----G------------------AV----ILDVAQAFVNVAAAR----LRPGGVFFLVSNPFL---KYEPLL-E----E---K---FGAFQTL-----------------
65 Fugue 73.8323% -60 - C1 -1T43 PRMC_ECOLI A:[2-275] EYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLF-VSPATLIPRPDTECLVEQALARLPE-----QP---C-------RILDLGTGTGAIALALASERPDCEIIA-VDRMPDAVSLAQRNAQHL---AIK--N--IHI--LQSDWFSAL-A--G--Q-QFAMIVSNPP-------------YI------------------------DEQDPHLQQGDVRFEPLTALVAADSG----M------------------AD----I----VHIIEQSRNA----LVSGGFLLLEHGWQQGEAVRQAFI-L----A---G---YHDVETC---RDYGDNERVTLGRY
8 PsiBlast_PDB 73.7024% -77 - C1 -3DMG ? A:[187-360] -------------------------------------------------------RAFSARILGAEYTFHHLPGVFSAGKVD-PA---------SLLLLEA----LQE-----RL---GPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVG-VEDDLASVLSLQKGLEAN---ALK--A--QAL--H-SDVDEAL-T--E--EARFDIIVTNPP-------------FH------------------------V------------------------G----G------------------AV----ILDVAQAFVNVAAAR----LRPGGVFFLVSNPFL---KYEPLL-E----E---K---FGAFQTL-----------------
7 PsiBlast_PDB 73.4624% -77 - C1 -3DMF ? A:[187-360] -------------------------------------------------------RAFSARILGAEYTFHHLPGVFSAGKVD-PA---------SLLLLEA----LQE-----RL---GPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVG-VEDDLASVLSLQKGLEAN---ALK--A--QAL--H-SDVDEAL-T--E--EARFDIIVTNPP-------------FH------------------------V------------------------G----G------------------AV----ILDVAQAFVNVAAAR----LRPGGVFFLVSNPFL---KYEPLL-E----E---K---FGAFQTL-----------------
9 PsiBlast_PDB 73.1224% -75 - C1 -3DMH ? A:[187-360] -------------------------------------------------------RAFSARILGAEYTFHHLPGVFSAGKVD-PA---------SLLLLEA----LQE-----RL---GPEGVRGRQVLDLGAGYGALTLPLARM--GAEVVG-VEDDLASVLSLQKGLEAN---ALK--A--QAL--H-SDVDEAL-T--E--EARFDIIVTNPP-------------FH------------------------V------------------------G----G------------------AV----ILDVAQAFVNVAAAR----LRPGGVFFLVSNPFL---KYEPLL-E----E---K---FGAFQTL-----------------
63 Fugue 72.9243% -22 - C1 -1DUS - Y882_METJA A:[4-197] --------------------------------------------FSEKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVD-KG---------TKILVENVV--VDK-----D----D-------DILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLN---NLD--N--YDIRVVHSDLYENV-K--D--R-KYNKIITNPP-------------IR------------------------A------------------------G----K------------------EV----L----HRIIEEGKEL----LKDNGEIWVVIQTKQGAKSLAK-YMK----D---V---FGNVETV---TIKGGYRVLKSKKL
2 PsiBlast_PDB 71.0930% -43 - C1 -2PJD - RSMC_ECOLI A:[174-335] -------------------------------------------------------------------------GVFSRDGLD-VG---------SQLLLSTLT--PHT-----K----G-------KVLDVGCGAGVLSVAFARHSPKIRLTL-CDVSAPAVEASRATLAAN---GVE--G---EV--FASNVFSEV-K--G--R--FDMIISNPP-------------FH------------------------D------------------------G----M------------------QTSLDAA----QTLIRGAVRH----LNSGGELRIVANAFLPYPDV---L-D----E---T---FGFHEVI---AQTGRFKVYRAI--
47 HHSearch 67.2831% -99 - C1 -2B3T PRMC_ECOLI A:[109-241] -----------------------------------------------------------------------------------------------------------------QP---C-------RILDLGTGTGAIALALASERPDCEIIA-VDRMPDAVSLAQRNAQHL---AIK--N--IHI--LQSDWFSAL-A--G--Q-QFAMIVSNPP-------------YIDEQDPHLQQGDVRFEPLTALVAADS------------------------G----M------------------AD----I----VHIIEQSRNA----LVSGGFLLLEHGWQ------------------------------------------------
44 HHSearch 66.5230% -28 - C1 -2PJD - RSMC_ECOLI A:[167-336] ------------------------------------------------------------------LTVKTLPGVFSRDGLD-VG---------SQLLLSTLT--PH------TK---G-------KVLDVGCGAGVLSVAFARHSPKIRLTL-CDVSAPAVEASRATLAAN---GV---E--GEV--FASNVFSE--V--K--G-RFDMIISNPP-------------FH------------------------D------------------------GMQTSL------------------DA----A----QTLIRGAVRH----LNSGGELRIVANAFLPYP---DVL-D----E---T---FGFHEVI---AQTGRFKVYRAIM-
61 HHSearch 60.9521% -66 - C1 -1NV8 PRMC_THEMA A:[97-262] ----------------------------------------------------------------------VEEGVFVPRPETEEL---------VELALELIR--KY------GI---K-------TVADIGTGSGAIGVSVAKF-SDAIVFA-TDVSSKAVEIARKNAERH---GVSD-R--FFV--RKGEFLEPF-KEKF--A-SIEMILSNPP-------------YV------------------------K------------------------S----SAHLPKDVLFEPPEALFGGED----G----LDFYREFFGR----YDTSGKIVLMEIGEDQVEELKKIV-S------------------------------------
58 HHSearch 60.4917% -95 - C1 -3UJC ? A:[42-203] -----------------------------------------------------------------------------------EA---------TKKILSDIE--LN------EN---S-------KVLDIGSGLGGGCMYINEKYG-AHTHG-IDICSNIVNMANERVSGN---N----K--IIF--EANDILTKEFP--E--N-NFDLIYSRDA-------------IL------------------------A------------------------LS---L------------------EN----K----NKLFQKCYKW----LKPTGTLLITDYCATEKENWDDEF-KEYVKQRKYTLITVEEYADI---LTACNFKNVVS---
50 HHSearch 60.0413% -88 - C1 -3E05 ? A:[27-165] -----------------------------------------------------------------------------------EV---------RAVTLSKLR--LQ------DD---L-------VMWDIGAGSASVSIEASNLMPNGRIFA-LERNPQYLGFIRDNLKKF---VAR--N--VTL--VEAFAPEGLDD--L--P-DPDRVFIGGS-------------GG--------------------------------------------------------------------------M----L----EEIIDAVDRR----LKSEGVIVLNAVTLDTLTKAVEFL-E----D---H---GYMV--------------------
68 Fugue 59.4216% -74 - C1 -1NV9 PRMC_THEMA A:[15-284] KIWSLIRDCSGKLEGVTETSVLEVLLIVSRVLGIRKEDLFLKDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMGLSFL-VEEGVFVPRPETEELVELAL--ELI-----RKYGIK-------TVADIGTGSGAIGVSVAKF-SDAIVFA-TDVSSKAVEIARKNAERH---GVS--DR-FFV--RKGEFLEPF-K--EKFA-SIEMILSNPPYVKSSALFEPPEALF------------------------G------------------------G----E------------------DG----L----DFYREFFGRY----DTSGKIVLMEIGEDQ-----VEEL-K----K---I---VSDTVFLKDSAGKYRFLLLNRRSS
62 HHSearch 59.4220% -79 - C1 -2XVM TEHB_ECOLI A:[21-141] ----------------------------------------------------------------------------------------------HSEVLEAVK--VV------KP---G-------KTLDLGCGNGRNSLYLAANG--YDVDA-WDKNAMSIANVERIKSIE---NLD--N--LHT--RVVDLNNLT-F--D--R-QYDFILSTVV-------------LM------------------------F------------------------L----EA-----------------KT----I----PGLIANMQRC----TKPGGYNLIVAAMDTA----------------------------------------------
55 HHSearch 57.4916% -75 - C1 -3A27 TYW2_METJA A:[90-223] ---------------------------------------------------------------GCLFKLDVAKIMWSQGNI--EE---------RKRMAFISN----------EN---E-------VVVDMFAGIGYFTIPLAKYSKPKLVYA-IEKNPTAYHYLCENIKLN---KLN--N--VIP--ILADNRDVE-L--K--D-VADRVIMGYV-------------H---------------------------------------------------------------------------K----T----HKFLDKTFEF----LKDRGVIHYHETVAE-----------------------------------------------