@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0272: (2016-03-14 )
LYKLIAIDIDGTLLTDDHKVTDEVKEAIRQAKLKGVKVVLCTGRPLVGVENYLTELELREEGDYVISFNGAFVQDTFTKEVISHLTLGIEDLKDIYEVSLNSNLHMHFFDDKALYTPNREIGKYTIVEAYLTGSQLIYKEIENVPEDFIMSKAMFIEEAPELEVGIAKIPESFREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIGDQENDVTMLEFAGLGIAMGNAPERIKQLADYTTASNNDSGVAKAIQKFVLDK

Atome Classification :

(20 SA) .........10....-....20........30........40........50....-....60........70........80-.........90........100----..-......110--.....--..-------120...-...---------------------.130.--..---..---------..-.140------....---.-.---..--.150....-....-.160.......170-.......180.......190.......200.......210.......220.......230.......240......--.--250.......260.......270
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) LYKLIAIDIDGTLLT-DDHKVTDEVKEAIRQAKLKGVKVVLCTGRPLVGVENYLTE-LELREEGDYVISFNGAFVQDTFTKE--VISHLTLGIEDLKDIYEVSLN-----SN-LHMHFFDDK--ALYTP--NR-------EIGKYT-IVE---------------------AY-LT--GS---QL---------IY-KE--------IENV---P-E---DF--IM--SKAM-FIEE-APELEVGIAKIPES-FREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIGDQENDVTMLEFAGLGIAMGNAPERIKQLAD--Y--TTASNNDSGVAKAIQKFVLDK--
64 HHSearch 94.8043%-105 - C4 -1RKQ YIDA_ECOLI A:[4-272] AIKLIAIDMDGTLLL-PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCITYNGALVQKAADGS--TVAQTALSYDDYRFLEKLSRE-----VG-SHFHALDRT--TLYTA--NR-------DISYYT-VHE---------------------SF-VA--TI---PL---------VF-CE--------AEKM---D-P---NT--QF--LKVM-MIDE-PAILDQAIARIPQE-VKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN--F--VTKSNLEDGVAFAIEKYVLN---
21 PsiBlast_CBE 94.3143%-104 - C4 -1RKQ YIDA_ECOLI B:[6-272] --KLIAIDMDGTLLL-PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCITYNGALVQKAADGS--TVAQTALSYDDYRFLEKLSRE-----VG-SHFHALDRT--TLYTA--NR-------DISYYT-VHE---------------------SF-VA--TI---PL---------VF-CE--------AEKM---D-P---NT--QF--LKVM-MIDE-PAILDQAIARIPQE-VKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN--F--VTKSNLEDGVAFAIEKYVLN---
1 PsiBlast_PDB 93.7943%-103 - C4 -1RKQ YIDA_ECOLI A:[6-272] --KLIAIDMDGTLLL-PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKE-LHMEQPGDYCITYNGALVQKAADGS--TVAQTALSYDDYRFLEKLSRE-----VG-SHFHALDRT--TLYTA--NR-------DISYYT-VHE---------------------SF-VA--TI---PL---------VF-CE--------AEKM---D-P---NT--QF--LKVM-MIDE-PAILDQAIARIPQE-VKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVAN--F--VTKSNLEDGVAFAIEKYVLN---
2 PsiBlast_PDB 83.8131%-104 - C4 -4DW8 ? A:[5-268] -YKLIVLDLDGTLTN-SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANE-LRMNEFGGFILSYNGGEIINWESKE--MMYENVLPNEVVPVLYECART-----NH-LSILTYDGA--EIVTE--N--------SLDPYV-QKE---------------------AF-L----N---KM---------AI-RE--------TNDF---L-T---DI--TLPVAKCL-IVGD-AGKLIPVESELCIR-LQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAAD--Y--ITLTNDEDGVAEAIERI------
3 PsiBlast_PDB 82.7230% -99 - C4 -3NIW ? A:[5-268] -YKLIVLDLDGTLTN-SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANE-LRMNEFGGFILSYNGGEIINWESKE--MMYENVLPNEVVPVLYECART-----NH-LSILTYDGA--EIVTE--N--------SLDPYV-QKE---------------------AF-LN--KM---AI------------RE--------TNDF---L-T---DI--TLPVAKCL-IVGD-AGKLIPVESELCIR-LQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAAD--Y--ITLTNDEDGVAEAIERI------
22 PsiBlast_CBE 82.5931%-105 - C4 -1NF2 ? C:[1-264] MYRVFVFDLDGTLLN-DNLEISEKDRRNIEKLSRKCY-VVFASGRMLVSTLN--VE-KKYFKRTFPTIAYNGAIV---YLPEEGVILNEKIPPEVAKDIIEYIKP-----LN-VHWQAYIDD--VLYSEKDNE-------EI-------K---------------------SY-AR--HS---NV---------DY-RV--------EPNL---S-ELVSKM--GT--TKLL-LIDT-PERLDELKEILSER-FKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--I--VTLTNNDSGVSYVLERISTD---
23 PsiBlast_CBE 82.2131%-102 - C4 -1NF2 ? B:[1-264] MYRVFVFDLDGTLLN-DNLEISEKDRRNIEKLSRKCY-VVFASGRMLVSTLN--VE-KKYFKRTFPTIAYNGAIV---YLPEEGVILNEKIPPEVAKDIIEYIKP-----LN-VHWQAYIDD--VLYSEKDNE-------EI-------K---------------------SY-AR--HS---NV---------DY-RV--------EPNL---S-ELVSKM--GT--TKLL-LIDT-PERLDELKEILSER-FKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--I--VTLTNNDSGVSYVLERISTD---
66 HHSearch 82.1135% -93 - C4 -1NRW YWPJ_BACSU A:[4-288] -MKLIAIDLDGTLLN-SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEP-LGI---KTWVISANGAVIHDP-EGR--LYHHETIDKKRAYDILSWLES-----EN-YYYEVFTGS--AIYTP--QN-------GRELLDVELD---------------------RF-RS--ANPEADLSVLKQAAEVQY-SQSGFAYINSFQELFEAD-E---PI--DF--YNILGFSFF-KEKLEAGWKRYE-H--AEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD--A--VTLTNDEHGVAHMMKHLL-----
5 PsiBlast_PDB 82.0631%-104 - C4 -1NF2 ? A:[1-264] MYRVFVFDLDGTLLN-DNLEISEKDRRNIEKLSRKCY-VVFASGRMLVSTLN--VE-KKYFKRTFPTIAYNGAIV---YLPEEGVILNEKIPPEVAKDIIEYIKP-----LN-VHWQAYIDD--VLYSEKDNE-------EI-------K---------------------SY-AR--HS---NV---------DY-RV--------EPNL---S-ELVSKM--GT--TKLL-LIDT-PERLDELKEILSER-FKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--I--VTLTNNDSGVSYVLERISTD---
67 HHSearch 80.6930%-102 - C4 -1NF2 ? A:[1-263] MYRVFVFDLDGTLLN-DNLEISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKR---TFPTIAYNGAIVYLP-EEG--VILNEKIPPEVAKDIIEYIKP-----LN-VHWQAYIDD--VLYSE--KD-------NE---E-I-K---------------------SY-ARHSNV---DY---------RVEPN--------LSEL---V-S---KM--GT--TKLL-LIDT-PERLDELKEILSER-FKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--I--VTLTNNDSGVSYVLERIST----
6 PsiBlast_PDB 79.5929% -89 - C4 -1YMQ ? A:[2-258] -TKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSE-LQDRNLIDGYITMNGAYC--FVGEE--VIYKSAIPQEEVKAMAAFCEK-----KG-VPCIFVEEHNISVCQP--NE-------MVKK---IFY---------------------DF-LH--VN---VI---------PT-VS--------FEEA---S-N---KE--VI--QMTP-FITE-EEEKEV-LPSIPTC------EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD--Y--VTAPIDEDGISKAMKHF------
4 PsiBlast_PDB 79.5933% -82 - C4 -1NRW YWPJ_BACSU A:[5-281] --KLIAIDLDGTLLN-SKHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEP-LGIKT---WVISANGAVIHDPEGR---LYHHETIDKKRAYDILSWLES-----EN-YYYEVFTGS--AIYTP--QNGRELLDVELDRFR-SANPEADLSVLKQAAEVQYSQSGFAY-IN--SF---QE---------LF-EA--------DE-----P-I---DFYNIL--GFSF-FKEK----LEAGWKRYEHA---EDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIAD--A--VTLTNDEHGVA------------
8 PsiBlast_PDB 78.2829% -88 - C4 -2RBK ? A:[1-258] MTKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSE-LQDRNLIDGYITMNGAYC--FVGEE--VIYKSAIPQEEVKAMAAFCEK-----KG-VPCIFVEEHNISVCQP--NE-------MVKK---IFY---------------------DF-LH--VN---VI---------PT-VS--------FEEA---S-N---KE--VI--QMTP-FITE-EEEKEV-LPSIPTC------EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD--Y--VTAPIDEDGISKAMKHF------
83 Fugue 78.2629% -90 - C4 -1NF2 ? A:[1-267] MYRVFVFDLDGTLLN-DNLEISEKDRRNIEKLS-RKCYVVFASGRMLVSTLNVEKK-YFKRT--FPTIAYNGAIVYLP-EEG--VILNEKIPPEVAKDIIEYIKP-----LN-VHWQAYIDD--VLYSE--KD-------N-EEIK-SYA---------------------RH-SN--VD---YR---------VE-PN--------LSEL---V-S---KM--GT--TKLL-LIDT-PERLDELKEILSER-FKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASD--I--VTLTNNDSGVSYVLERISTDCLD
7 PsiBlast_PDB 78.0129% -85 - C4 -2RB5 ? A:[1-258] MTKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSE-LQDRNLIDGYITMNGAYC--FVGEE--VIYKSAIPQEEVKAMAAFCEK-----KG-VPCIFVEEHNISVCQP--NE-------MVKK---IFY---------------------DF-LH--VN---VI---------PT-VS--------FEEA---S-N---KE--VI--QMTP-FITE-EEEKEV-LPSIPTC------EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD--Y--VTAPIDEDGISKAMKHF------
10 PsiBlast_PDB 77.4828% -87 - C4 -2RAV ? A:[1-258] MTKALFFDIAGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSE-LQDRNLIDGYITMNGAYC--FVGEE--VIYKSAIPQEEVKAMAAFCEK-----KG-VPCIFVEEHNISVCQP--NE-------MVKK---IFY---------------------DF-LH--VN---VI---------PT-VS--------FEEA---S-N---KE--VI--QMTP-FITE-EEEKEV-LPSIPTC------EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD--Y--VTAPIDEDGISKAMKHF------
9 PsiBlast_PDB 77.0928% -86 - C4 -2RAR ? A:[1-258] MTKALFFDIAGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSE-LQDRNLIDGYITMNGAYC--FVGEE--VIYKSAIPQEEVKAMAAFCEK-----KG-VPCIFVEEHNISVCQP--NE-------MVKK---IFY---------------------DF-LH--VN---VI---------PT-VS--------FEEA---S-N---KE--VI--QMTP-FITE-EEEKEV-LPSIPTC------EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAAD--Y--VTAPIDEDGISKAMKHF------
12 PsiBlast_PDB 76.2727% -95 - C4 -2QYH ? A:[4-256] --KIVFFDIDGTLLD-EQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQ-LGI----DSFVSFNGQYV--VFEGN--VLYKQPLRREKVRALTEEA-H-----KN-GHPLVFMDA--E--KM--RA-------SIGDHP-HIH---------------------VS-MA--SL---KF---------AH-PP--------VDPL---YYE---NK--DI--YQAL-LFCR-AEEEEPYVRNYPE------FRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVAD--F--VTKPVDKEGIWYGLKQLQL----
14 PsiBlast_PDB 74.0728% -76 - C4 -3PGV ? A:[21-284] -YQVVASDLDGTLLS-PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDN-LGIRS---YMITSNGARVHDSDGQQ--IFAH-NLDRDIAADLFEIVRNDPKIVTN-VYR---EDE--WYMNR--HR------------F-FKE---------------------AV-F----N---YK---------LY-EP--------GELD---P-Q---G----I--SKVF-FTCE-DHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELE--VIGSNADDAVPRYLRKLYL----
68 HHSearch 74.0128% -85 - C4 -3PGV ? A:[21-284] -YQVVASDLDGTLLS-PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDN-LGI---RSYMITSNGARVHDS-DGQ--QIFAHNLDRDIAADLFEIVRN-----DPKIVTNVYRED--EWYMN--RH-------R------------------------------FFKEA--VF---NY---------KL-YE--------PGE----L-D---PQ--GI--SKVF-FTCEDHEHLLPLEQAMNAR-WGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHP--ELEVIGSNADDAVPRYLRKLYL----