@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0275: (2016-03-14 )
MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGDAIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMNNIKVKNLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPVKTYGKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAATSKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLKKAKAKVYRTDRNKTVVVTGNGSSYSIGK

Atome Classification :

(20 SA) -----------.........10........20.........30........40.---.---.------------------------..-....50----.------.......60-....-----------------------.--.-------.---------------.70....--..-----.--.80........90.....--..----------.100..----------.----..--------..110---------........-----------.--120----....----------..-------.----------.-----------.--130--...-.-..--..140-..--------------...----.-------.150.....-..160------....-------.--------...170....----.----.---.180.--......190------------.-..----------------...-.200.-......-----------210---..-----------.------..-----------..--..220.......230.....--.------.--240.......250..------.....260.......270.......280-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------MKKGILNVLLVFALIAGLSV-PSSMQVEAAAPTIKVHFIDV-G---Q---G------------------------DA-IYIKAP----S------GEDILIDAG-NKGK-----------------------G--K-------T---------------VVNYLKK--LK-----V--KDIEIMIASHSDADNIGG--LP----------EVMNNI----------K----VK--------NLY-----------APKSTNTT-----------A--A------YKNF----------VN-------T----------A-----------K--KK---KLT-I-KT--AKAGV-KL--------------PVK----G-------VNAQFVGPV-KTYG-------KTDR-------N--------NWSAVLHVAY----K----K---NTFLF--TGDAQTKAE------------N-DM----------------IKA-KKTLR-ADVLKV-----------S-----TQ-----------G------SK-----------AA--TSKAFVNVVKPKYAIISVGK--N------G--YGHPTSQTVNTLKKA------KAKVYRTDRNKTVVVTGNGSSYSIGK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 93.9219% -51 - C3 -2BIB ? A:[2-284] ----------------------------------------ESSGNKIHFINV-Q---EGG-S------------------------DA-IILES-----N------GHFAMVDTG-EDYDFPDGSDSRYPWREGIETSYKHVLT--D-------R---------------VFRRLKE--LS-----V--QKLDFILVTHTHSDHIGN--VD----------ELLSTY----------P----VD--------RVY-----------LKKYSDSRITNSERLWDNLY--G------YDKV----------LQ-------T----------A-----------T--ET---GVSVI-QN--ITQGDAHF--------------QFG----D-------MDIQLYNYE-NETDSSGELKKIWDD-------N--------SNSLISVVKV----N----G---KKIYL--GGDLDNVHG------------A-ED----------------KYG-PLIGK-VDLMKF-----------N-----HH-----------HD-----TN-----------KS--NTKDFIKNLSPSLIVQTSDSL-P------W--KNGVDSEYVNWLKER------GIERINAASKD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 Fugue 84.4816% -49 - C3 -2BIB ? A:[1-540] ---------------------------------------QESSGNKIHFINV-Q---E---G------------------------GS-DAIILES---N------GHFAMVDTG-EDYDFPDGSDSRYPWREGIETSYKHVLT--D-------R---------------VFRRLKE--LS-----V--QKLDFILVTHTHSDHIGN--VD----------ELLSTY----------P----VD--------RVYLKKYSDSRITNSERLWDNL-----------Y--G------YDKV----------LQ-------T----------A-----------T--ET---GVS-V-IQNITQGDA-HF--------------QFG----D-------MDIQLYNYE-NETD-------SSGELKKIWDDN--------SNSLISVVKV----N----G---KKIYL--GGDLDNVHG------------A-ED----------------KYG-PLIGK-VDLMKFN----------H-----HH-----------D------TN-----------KS--NTKDFIKNLSPSLIVQTSDSL-P------W--KNGVDSEYVNWLKER------GIERINAASKDYDATVFDIRKDGFVNISTSYKPIPSFQAGWHKSAYGNWWYQAPDSTGEYAVGWNEIEGEWYYFNQTGILLQNQWKKWNNHWFYLTDSGASAKNWKKIDGIWYYFNKENQMEIGWVQDKEQWYYLDVDGSMKTGWLQYMGQWYYFAPSGEMKMGWVKDKETWYYMDSTGVMKTGEIEVAGQHYYLEDSGAMKQGWHKKANDWYFYKTDGSRAVGWIKDKDKWYFLKENGQLLVNGKTPEGYTVDSSGAWLVDVSIEK
31 HHSearch 81.1113% -56 * C3 *3MD7 ? A:[24-291] ---------------------------------------SPRNCLRFTLLGC-G---S---SPGVPRINGDWGKCDPKNPKNRRRRAS-LLVERYDAEGN------NTVVVIDTG-PDF----------------------------------------------------RMQMID--SG-----V--HMLDAAVYTHPHADHIHG--ID----------DLRTYVVDNG------R----LM--------DVY-----------ANRLTRN---------------R------LYDT----------FG-------Y----------CFETPVGSS---Y--PP---ILS-M-HD--IAPET-PF--------------SIEGAGGA-------IRFEPFSQV-HGD----------------------------IESLGFRIG---------------SVVY--CTDVSAFPE------------Q--S----------------LQ---YIKD-ADVLII-----------GALQYRPH-----------P------SH-----------FSLGEALEWIEKLSPKRAILTHMH--V------P--LD--YET----VMR--------------ETPHHVEPGYDGLRFEV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 HHSearch 76.2019% -38 - C3 -1K07 ? A:[16-240] ---------------------------------------------NLYYVGT-D---D---L------------------------AS-YLIVT-----P------RGNILINSD-LEAN-----------------------V--P-------M---------------IKASIKK--LG-----FKFSDTKILLISHAHFDHAAG--SE----------LIKQQT----------K----A---------KYM-----------VMDEDVSVIL---------S--GGKSDFHYAND----------SS-------T----------Y-----------F--TQ---STV-D-KV--LHDGE-RV--------------ELG----G-------TVLTAHLTPGHT-----------------------------RGCTTWTMKLKDHGK----Q---YQAVI--IGSIGVNPG------------Y-KLVDNITYPKIAEDYKHSIKV-LESMR-CDIFLG-----------S-----HA-----------G------MF----------------------DLKNKYVLLSKGQN-N------P--FVDPT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
54 Fugue 68.5815% -15 - C3 -1WW1 ? A:[1-280] ----------------------------MNI-IGFSK------------------------A------------------------LF-STWIYY----S------PERILFDAG-EGVS-----------------------T--T-------L---------------------G--SK-----V--YAFKYVFLTHGHVDHIAG--LW----------GVVNIR----------N----NGMGDREKPLDVF-----------YPEGNRAV-----------E--E------YTEF----------IK-------R----------A-----------N--PDLRFSFN-V-HP--LKEGE-RV--------------FLR----NAGGFKRYVQPFRTKSE-VSFG-------YHIF-------E--------VRRKFVTEEY----H----K---KVLTI--SGDSLALDP------------E-EI----------------RGT-ELLIHECTFLDA-----------R-----DN-----------H------AA-----------ID--EVMESVKAAGVKKVILY-----------------HISTRYIRQLKSV------IKKYREEMPDVEILYMDPRKVFEM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 68.4517% -37 - C3 -2QED GLO2_SALTY A:[7-229] -------------------------------------------SMNLNSIPA-F---Q---D------------------------NYIWVLTND----E------GRCVIVDPG-EAA-----------------------------------P---------------VLKAIAE--HK-----W---MPEAIFLTHHHHDHVGG--VK----------ELLQHF----------P----QM--------TVY-----------GPAETQDK----------------------------------------------------------------------------GA-T-HL--VGDGD-TI--------------RVL----G-------EKFTLFATPGHT-----------------------------LGHVCYFS---------------RPYLF--CGDTLFSGGCGRLFEGTPSQMY-QS----------------LMK-INSLP-DDTLIC-----------C-----AH-----------E------YT-----------LA---NIKFALSILPHDSFINEYYR-KVKELRVK--KQMTLPVILKNERKI------N-LFLRTEDI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 HHSearch 67.5116% -56 - C3 -3M8T ? A:[45-208] --------------------------------------------DNIYYVGT-D---G---I------------------------AV-YVIKT-----S------QGLILMDTA-MPQS-----------------------T--G-------M---------------IKDNIAK--LG-----FKVADIKLILNTHAHLDHTGG--FA----------EIKKET----------G----A---------QLV-----------AGERDKP---------------L------LEGG----------YYPGDEKNED----------L-----------AF-PA---VKV-D-RA--VKEGD-RV--------------TLG----D-------TTLTAHATPGHS------------P-----------------GCTSWEMTV----KDGKED---REVLFFCSGTVALN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 66.1511% -54 - C3 -1ZKP ? A:[18-267] -------------------------------------LYFQSNAMKMTVVGF-W---G---GFPEAGEAT----------------SG-YLFEH-----D------GFRLLVDCG-SGVL--------------------------A-------Q---------------LQK---Y--IT-----P--SDIDAVVLSHYHHDHVAD--IG----------VLQYARLITSATKGQLP----EL--------PIY-----------GHTFDEN---------------G------FHSL----------T-------------------------------H--EP---HTK-G-IP--YNPEE-TL--------------QIG----P-------FSISFLKTV-HPV-----------------------------TCFAMRITA----G----N---DIVVY--SADSSYIPE---------------F----------------IPF---TKD-ADLFIC-----------E-----CNMYAHQEAAKAGH------MN-----------ST--EVASIAKDANVKELLLTHLP--H------T--G--NPADLVTEAKQ--------------IFSGHITLAHSGYVWN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 66.0114% -42 - C3 -2WYL ULAG_ECOLI A:[30-332] ------------------------------------QEQVAPGTFAMWWLG----------C------------------------TG-IWLKS-----EG-----GTNVCVDFW-CGTGKQSHGN---------------------KLQPNLRT---------------TPFVLDP--FA-----I--RQIDAVLATHDHNDHIDVNVAA----------AVMQNCA---------D----DV--------PFI-----------GPKTCVD-------------------------L----------WI-------G----------W-----------G--VP---KER-C-IV--VKPGD-VV--------------KVK----D-------IEIHALDAF-DR-----------GM-------D--------DRAVNYLFKT----P----G---GSLYH--SGDSHYSNY------------Y-AK----------------HG---NEHQ-IDVALG-----------S-----YG-----------E------NPRGITDKMT---SA--DMLRMGEALNAKVVIPFHHDIWS------N--FQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
56 Fugue 63.6213% -41 - C3 -2P4Z ? A:[10-284] ----------------HGSVEVQVLIENVVF-ARNFVAE------------------H---G------------------------LS-LLLKK-----G------NKEIVVDTG-QSEN-----------------------F--I-------K---------------NCGLMG---ID-----V--GRIKKVVLTHGHYDHIGG--LK----------GLLERN----------P----EV--------KIY-----------THKEILNK-----------K--Y------AMRKGGQFEEIGFDLS-------F----------Y-----------E--KY---KNN-F-VL--IDKDA-EIEEGFYVITNTDITYDNE----F-------TTKNFFVEK-EGKR-------IPDK-------F--------LDEVFVVVKE----E----D---GINVV--TGCSHAGIL------------N-IL----------------ETA-RNRFG-VSYIKS-----------L-----IG-----------GFHLRGMEE-----------EK--VKDIARKIEEYGVKKVLTGH--C------T--------------GID------EYGFLKSVLKDKISYLTTSSSIVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 62.4116% -56 - C3 -2I7T CPSF3_HUMAN A:[9-237] -----------------------------------------SDQLLIRPLGA-G---QEVGR------------------------SC-IILEF-----K------GRKIMLDCG-IHPG-----------------------LEGM-------D---------------ALPYIDL--ID-----P--AEIDLLLISHFHLDHCGA--LP----------WFLQKT----------SF---KG--------RTF-----------MTHATKA---------------I------YRWL----------LS-------D----------YVKLYTETDL--E--ES---MDK-I-ET--INFHE-VK--------------EVA----G-------IKFWCYHAG-HVL-----------------------------GAAMFMIEI----A----G---VKLLY--TGDFSRQ----------------------------------MAAEIPNIK-PDILII-----------E--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53 Fugue 62.2016% -13 - C3 -1P9E ? A:[36-329] AAPQVRTSAPGYYRMLLGDFEITALSDGTVALPVDKRLNQPAPKTQSALAKS-F---Q---K------------------------AP-LETSVT----GYLVNTGSKLVLVDTGAAGLF-----------------------G--P-------T---------------LGRLAAN--LKAAGYQP--EQVDEIYITHMHPDHVGG--LMVGEQLAFPNAVVRADQ----------K----EA--------DFW-----------LSQTNLDK-----------A--P------DDES----------KG-------F----------F-----------K--GA---MAS-L-NP--YVKAG-KF--------------KPF----S-------GNTDLVPGI-KALA-------SHGH-------T--------PGHTTYVVES----Q----G---QKLAL--LGDLILVAA------------V-QF----------------DDP-SVTTQ-LDS--------------D-----SK-----------S------VA-----------VE--RKKAFADAAKGGYLIAA----------------SHLSFPGIGHIRAE------GKGYRFVPVNYSVVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47 HHSearch 60.8915% -79 - C3 -1XM8 GLO2N_ARATH A:[1-135] --------------------------------------------MQIELVPCLK---D---N------------------------YA-YILHDE----DT-----GTVGVVDPS-EA----------------------------E-------P---------------IIDSLKR--SG--------RNLTYILNTHHHYDHTGG--NL----------ELKDRY----------G----A---------KVI-----------GSAMDKD---------------R------IP-----------------------------------------------------GI-D-MA--LKDGD-KW--------------MFA----G-------HEVHVMDTPGHT-----------------------------KGHISLYFP----------G---SRAIF--TGDTMFS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39 HHSearch 60.4415% -55 - C3 -2VW8 Y1000_PSEAE A:[13-184] -------------------------------------------DDDLCLLGD-V---Q---V------------------------PV-FLLRLG----E------ASWALVEGG-ISRD-----------------------A--E-------L---------------VWADLCR--WVAD---P--SQVHYWLITHKHYDHCGL--LP----------YLCPRL----------P----NV--------QVL-----------ASERTCQAWK---------S--ESAVRV-VERL----------NR-------Q----------LLRAEQRLPEACA--WD---ALP-V-RA--VADGE-WL--------------ELG----PR------HRLQVIEAHGHS-----------------------------DDHVVFYD------V----R---RRRLF--CGDALGE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 HHSearch 59.5614% -42 - C3 -1SML BLA1_STEMA A:[28-189] --------------------------------------------DHTWQIGT-E---D---L------------------------TA-LLVQT-----P------DGAVLLDGG-MPQM-----------------------A--S-------H---------------LLDNMKA--RG-----VTPRDLRLILLSHAHADHAGP--VA----------ELKRRT----------G----A---------KVA-----------ANAESAV---------------L------LARG----------GS-------DDLHFGDG---I-----------TY-PP---ANA-D-RI--VMDGE-VI--------------TVG----G-------IVFTAHFMAGHT-----------------------------PGSTAWTWTD----T----RNGKPVRIA--YADSLSAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 59.2217% -57 - C3 -1QH5 GLO2_HUMAN A:[1-138] --------------------------------------------MKVEVLPA-LT--D---N------------------------YM-YLVIDD----ET-----KEAAIVDPV-QP----------------------------Q-------K---------------VVDAARK--HG-----V---KLTTVLTTHHHWDHAGG--NE----------KLVKLE----------S----GL--------KVY-----------GGDDRIG------------------------A-----------------------------------------------------L-T-HK--ITHLS-TL--------------QVG----S-------LNVKCLATPCHT-----------------------------SGHICYFVSK----P----GGSEPPAVF--TGDTLFV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 59.1416% -47 - C3 -3IEK RNSE_THET8 A:[1-167] --------------------------------------------MRIVPFGA-AREVT---G------------------------SA-HLLLA-----G------GRRVLLDCG-MFQG-----------------------K--E-------E---------------A-RNHAPFGFD-----P--KEVDAVLLTHAHLDHVGR--LP----------KLFREG----------Y----RG--------PVY-----------ATRATVLL-----------MEIV------LEDA----------LK-------VMDEPFFGPEDV-----------E--EA---LGH-L-RP--LEYGE-WL--------------RLG----A-------LSLAFGQAG-HLP-----------------------------GSAFVVAQG----E----G---RTLVY--SGDLGNRE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 57.5711% -37 - C3 -3RPC ? A:[3-262] ------------------------------------------AMTQYTHIR----------N------------------------AT-GKLTI-----K------NTTFLIDPF-LAPK-----------------------D--T-------YPGFEGTFNYQQRMPMVDLPLSM--DD-----LL-SNVTAVVVTHTHLDHWDD--TA----------INSIPK----------S-----L--------PIF-----------VQNTADK------------------------EL----------IT-------S----------Q-------------------GF--I-DV--RIIFE-SL--------------EFN----G-------ITLRKTGGS-HGTV-------E-MY-------ANPVLAPLAGDAMGVIFEAA---D----E---PTVYL--VGDTVWTSD------------VEKA----------------LL----RFD-PNVIIM-----------N-----TG-----------Y------AQILGFEDSIIMGTK--DIGRMVVRKPEAKIIAVHMD--T------VNHTATSRKDVRKFIKGN------N-------IESHVAVPEDGETI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 HHSearch 54.7313% -45 - C3 -3BK2 RNJ_THET2 A:[14-185] -----------------------------------------QDHVEIIPLGG-MGEIG---K------------------------NI-TVFRF-----R------DEIFVLDGG-LAFP-----------------------E--EGMPGVD-L---------------LIPRVDYLIEH-----R--HKIKAWVLTHGHEDHIGG--LP----------FLLPMI----------FGKESPV--------PIY-----------GARLTLG---------------L------LRGK----------LE-------E----------F-----------GLRPG---AFN-L-KE--ISPDD-RI--------------QVGR---Y-------FTLDLFRMT-HSI-----------P-----------------DNSGVVIRT----P----I---GTIVH--TGDFKLDPT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 54.0614% -59 - C3 -3G1P PHNP_ECOLI A:[41-224] ---------------------------------------------------------------------------------------S-GVVKF-----N------DAITLIDAG-LHDL---------------------------------------------------A---DR--WS-----P--GSFQQFLLTHYHMDHVQG--LF----------PLRWGV----------GD---PI--------PVY-----------GPPDEQG----------------------CDDL----------FK-------H----------P---------------G---LLD-FSHT--VEPFV-VF--------------DLQ----G-------LQVTPLPLN-HSK-----------------------------LTFGYLLET----A----H---SRVAW--LSDTAGLPE------------K--T----------------LKF-LRNNQ-PQVMVMDCSHPPRADAPR-----NH-----------C------DL------------N--TVLALNQVIRSPRVILTHIS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------