@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0282: (2016-03-14 )
MWKLALCQTDVVFKYPDANYARIEKAIVEAAKNGADIAVLPEMWNTGYALNELAGVADLNGGRTKEFLATLSEKHQIAIIGGSVSISEGTKFSNTMYAFDKYGGLLSSYKKVHLFQLMNEHLYLEAGNDKNLFRLDGVSCAGFICYDIRFPEWIRKHTSEGSEVIFVSAQWPAERVTQWEQLLIARAIENQTFVVAVNRVGDDPNNHFNGHSLVIDPLGNIVVHGGEEEGNIYAEIDLNLVAETRGIIPVFTDRRPELY

Atome Classification :

(21 SA) ------------------------------------------------------------------........-------.10.....--...20........30.--....--...40....-.-.-..50--.-------..-.-.---.--.-----..----60........70........80....--.--.---.---.--90..---.-.....100.......110..-----------..-------.-------.--------.120....------..------.-130...-....140.......150---...------...------.160-...-..-..170----.-.--------.-.-....180.....--..190.......200---.-..----.-.-...-----------210.......220-..-....-.230--........240.......250.-..-......----------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------------------------------------------MWKLALCQ-------TDVVFKYP--DANYARIEKAIVEAAK--NGAD--IAVLPEMWN-T-G-YAL---N-------EL-A-G---V--A-----DL----NGGRTKEFLATLSEKHQIAIIGGSVS--I--S---E---G--TKFS---N-TMYAFDKYGGLLSSYKKVHL-----------FQ-------L-------M--------NEHLYLEA------GN------D-KNLFRL-DGVSCAGFICYDIRFPE---WIR------KHT------SEGS-EVI-FV-SAQW-----P-A--------E-R-VTQWEQLLIARA--IENQTFVVAVNRVG----D-DP----N-N-HFN-----------GHSLVIDPLGNIV-VH-GGEE-EGN---IYAEIDLNLVAETRGIIPV--F-TD-RRPELY----------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 94.6338% -95 - C2 -3P8K ? A:[20-280] ------------------------------------------------------------------HMKVQIYQ-------LPIVFGDS--SKNETQITQWFEKNMN--AEVD--VVVLPEMWN-N-G-YDL---E-------HL-N-EK--A--D-----NN----LGQ-SFSFIKHLAEKYKVDIVAGSVS--N--I---R---N--NQIF---N-TAFSVNKSGQLINEYDKVHL-----------VP-------M-------L--------REHEFLTA------GE------YVAEPFQLSDGTYVTQLICYDLRFPE---LLR------YPA------RSGA-KIA-FY-VAQW-----P-M--------S-R-LQHWHSLLKARA--IENNMFVIGTNSTG----F-DG----N-T-EYA-----------GHSIVINPNGDLV-GE-LNES-ADI---LTVDLNLNEVEQQRENIPV--F-KS-IKLDLY----------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 94.3438% -90 - C2 -3P8K ? A:[22-280] --------------------------------------------------------------------KVQIYQ-------LPIVFGDS--SKNETQITQWFEKNMN--AEVD--VVVLPEMWN-N-G-YDL---E-------HL-N-E---K--A-----DN----NLGQSFSFIKHLAEKYKVDIVAGSVS--N--I---R---N--NQIF---N-TAFSVNKSGQLINEYDKVHL-----------VP-------M-------L--------REHEFLTA------GE------YVAEPFQLSDGTYVTQLICYDLRFPE---LLR------YPA------RSGA-KIA-FY-VAQW-----P-M--------S-R-LQHWHSLLKARA--IENNMFVIGTNSTG----F-DG----N-T-EYA-----------GHSIVINPNGDLV-GE-LNES-ADI---LTVDLNLNEVEQQRENIPV--F-KS-IKLDLY----------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 93.2132% -98 - C2 -2W1V - NIT2_MOUSE A:[41-307] ------------------------------------------------------------------TFRLALIQ-------LQVSSI-K--SDNLTRACSLVREAAK--QGAN--IVSLPECFN-S-P-YGT---T-------YF-P-DY--A--E-----KI----PGE-STQKLSEVAKESSIYLIGGSIP--E--E---D---A--GKLY---N-TCSVFGPDGSLLVKHRKIHL-----------FD-------IDVPGKITF--------QESKTLSP------GD------S-FSTFDT-PYCKVGLGICYDMRFAE---LAQ------IYA------QRGC-QLL-VY-PGAF-----N-L--------TTG-PAHWELLQRARA--VDNQVYVATASPAR----D-DKA---S-Y-VAW-----------GHSTVVDPWGQVL-TK-AGTE-ETI---LYSDIDLKKLAEIRQQIPI--L-KQ-KRADLY----------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 92.2031% -96 - C2 -2W1V - NIT2_MOUSE A:[42-307] -------------------------------------------------------------------FRLALIQ-------LQVSSIKS--D-NLTRACSLVREAAK--QGAN--IVSLPECFN-S-P-YGT---T-------YF-P-D---Y--A-----EK----IPGESTQKLSEVAKESSIYLIGGSIP--E--E---D---A--GKLY---N-TCSVFGPDGSLLVKHRKIHL-----------FD-------IDVPGKITF--------QESKTLSP------GD------S-FSTFDT-PYCKVGLGICYDMRFAE---LAQ------IYA------QRGC-QLL-VY-PGAFNLTTGP-A--------------HWELLQRARA--VDNQVYVATASPAR----D-DK----A-S-YVAW----------GHSTVVDPWGQVL-TK-AGTE-ETI---LYSDIDLKKLAEIRQQIPI--L-KQ-KRADLY----------------------------------------------------------------------------------------------------------------------------------------
42 Fugue 90.3130% -97 - C2 -1EMS NFT1_CAEEL A:[10-440] --------------------------------------------------------------MATGRHFIAVCQ-------MTSDND-L--EKNFQAAKNMIERAGE--KKCE--MVFLPECFD-FIG-LNK---N-------EQ-I-D---L--A-----MA----TDCEYMEKYRELARKHNIWLSLGGLH--H--KDPSD---A--AHPW---N-THLIIDSDGVTRAEYNKLHL-----------FD-------L-------EIP------GKVRLMESEFSKAGTE------M-IPPVDT-PIGRLGLSICYDVRFPE---LSL------WNR------KRGA-QLL-SFPSAFT-----L-N--------T-G-LAHWETLLRARA--IENQCYVVAAAQTG----A-HN----P-K-RQSY----------GHSMVVDPWGAVV-AQ-CSER-VDM---CFAEIDLSYVDTLREMQPV--F-SH-RRSDLYTLHINEKSSETGGLKFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFPRSNEQMAEEAVVYRNLM
29 HHSearch 89.2030% -96 - C2 -1EMS NFT1_CAEEL A:[14-304] ------------------------------------------------------------------RHFIAVCQ-------MTS-DNDL--EKNFQAAKNMIERAGE--KKCE--MVFLPECFD-F-IGLNK---N-------EQ-IDL---A--M-----AT----DCE-YMEKYRELARKHNIWLSLGGLH--H--K---DPSDA--AHPW---N-THLIIDSDGVTRAEYNKLHL-----------FD-------L-------EIPGKVRL-MESEFSKA------GT------EMIPPVDT-PIGRLGLSICYDVRFPE---LSL------WNR------KRGA-QLL-SF-PSAF-----T-L--------NTG-LAHWETLLRARA--IENQCYVVAAAQTG----A-HNP---K-R-QSY-----------GHSMVVDPWGAVV-AQ-CSER-VDM---CFAEIDLSYVDTLREMQPV--F-SH-RRSDLY----------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 87.6929% -95 - C2 -1F89 - NIT3_YEAST A:[10-282] ------------------------------------------------------------------KIKVALVQ-------LSGSSPDK--MANLQRAATFIERAMKEQPDTK--LVVLPECFN-S-P-YST---D-------QF-R-K---Y--SEVINPKE----PST-SVQFLSNLANKFKIILVGGTIP--E--LDP-K---T--DKIY---N-TSIIFNEDGKLIDKHRKVHL-----------F-------------------------HESETLSP------GE------K-STTIDT-KYGKFGVGICYDMRFPE---LAM------LSA------RKGA-FAM-IY-PSAF-----N-T--------VTG-PLHWHLLARSRA--VDNQVYVMLCSPAR----N-LQS---S-Y-HAY-----------GHSIVVDPRGKIV-AE-AGEG-EEI---IYAELDPEVIESFRQAVPL--T-KQ-RRF-------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 86.4529% -93 - C2 -1F89 - NIT3_YEAST A:[12-282] --------------------------------------------------------------------KVALVQ-------LSGSSPDK--MANLQRAATFIERAMK--EQPDTKLVVLPECFN-S-P-YST---D-------QF-R-K---Y--S-----EVINPKEPSTSVQFLSNLANKFKIILVGGTIPELD--P---K---T--DKIY---N-TSIIFNEDGKLIDKHRKVHL-----------F-------------------------HESETLSP------GE------K-STTIDT-KYGKFGVGICYDMRFPE---LAM------LSA------RKGAFAMI-YP-SAFN-----T-V--------T-G-PLHWHLLARSRA--VDNQVYVMLCSPAR----NLQS----S-Y-HAY-----------GHSIVVDPRGKIV-AE-AGEG-EEI---IYAELDPEVIESFRQAVPL--T-KQ-RRF-------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 86.0425% -90 - C2 -3HKX - ? A:[2-259] --------------------------------------------------------------------RIALMQ-------HTARPLDP--QHNLDLIDDAAARASE--QGAQ--LLLTPELFG-F-G-YVP---S-------QICA-Q---V--S-----AE----QVDAARSRLRGIARDRGIALVW-SLP--G--P---E---G--PEQR---GITAELADEHGEVLASYQKVQL-----------YG-------P-------E--------EKAAFVPG------EQ------P-PPVLSW-GGRQLSLLVCYDVEFPE---MVR------AAA------ARGA-QLV-LV-PTAL-----A-G--------D-E-TSVPGILLPARA--VENGITLAYANHCG----P-EG----G-L-VFD-----------GGSVVVGPAGQPL-GE-LGVE-PGL---LV--VDLPD----------DYL-QD-RRAELH----------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 85.6327% -96 * C2 *1EMS NFT1_CAEEL A:[10-299] --------------------------------------------------------------MATGRHFIAVCQ-------M-TSDN--DLEKNFQAAKNMIERAGE--KKCE--MVFLPECFD-F-I-GL-NKNE-------QI-D-L---A--------MA----TDCEYMEKYRELARKHNIWLSLGGLH--H--K---DPSDA--AHPW---N-THLIIDSDGVTRAEYNKLHL-----------FD-------L-------EIPGKVRLMESEFSKAG------TE------M-IPPVDT-PIGRLGLSICYDVRFPE---LSL------WNR------KRGA-QLL-SF-PSAF-----TLN--------T-G-LAHWETLLRARA--IENQCYVVAAAQTG----A-HN----PKR-QSY-----------GHSMVVDPWGAVV-AQCSE-R-VDM---CFAEIDLSYVDTLREMQPV--F-S-HR---------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 85.2625% -91 - C2 -4IZW ? A:[22-279] --------------------------------------------------------------------RIALMQ-------HTARPLDP--QHNLDLIDDAAARASE--QGAQ--LLLTPLLFG-F-G-YVP---S-------QICA-Q---V--S-----AE----QVDAARSRLRGIARDRGIALVW-SLP--G--P---E---G--PEQR---GITAELADEHGEVLASYQKVQL-----------YG-------P-------E--------EKAAFVPG------EQ------P-PPVLSW-GGRQLSLLVCYDVEFPE---MVR------AAA------ARGA-QLV-LV-PTAL-----A-G--------D-E-TSVPGILLPARA--VENGITLAYANHCG----P-EG----G-L-VFD-----------GGSVVVGPAGQPL-GE-LGVE-PGL---LV--VDLPD---------ADYL-QD-RRAELH----------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 85.1233% -90 - C2 -1EMS NFT1_CAEEL A:[29-304] -------------------------------------------------------------------------------------------EKNFQAAKNMIERAGE--KKCE--MVFLPECFDFI-G-LNK---N-------EQ-I-D---L--A-----MA----TDCEYMEKYRELARKHNIWLSLGGLH--H--K---D---P--SDAAHPWN-THLIIDSDGVTRAEYNKLHL-----------FD-------LEIPGKVRL--------MESEFSKA------GTEMIPPVD-TPIGRL--GLS----ICYDVRFPELSLWNR------K---------RGA-QLLSFP-SAFT-----L-N--------T-G-LAHWETLLRARA--IENQCYVVAAAQTGA---H-NP----K-R-QSY-----------GHSMVVDPWGAVV-AQ-CSER-VDM---CFAEIDLSYVDTLREMQPV--F-SH-RRSDLY----------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 84.9124% -93 - C2 -4IZU ? A:[22-279] --------------------------------------------------------------------RIALMQ-------HTARPLDP--QHNLDLIDDAAARASE--QGAQ--LLLTPQLFG-F-G-YVP---S-------QI-C-AQVSA--E-----QV----DAARSR--LRGIARDRGIALVW-SLP--G--P---E---G--PEQR---GITAELADEHGEVLASYQKVQL-----------YG-------P-------E--------EKAAFVPG------EQ------P-PPVLSW-GGRQLSLLVCYDVEFPE---MVR------AAA------ARGA-QLV-LV-PTAL-----A-G--------D-E-TSVPGILLPARA--VENGITLAYANHCG----P-EG----G-L-VFD-----------GGSVVVGPAGQPL-GE-LGVE-PGL---LV--VDLP----------ADYL-QD-RRAELH----------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 84.5425% -89 - C2 -4IZS ? A:[22-279] --------------------------------------------------------------------RIALMQ-------HTARPLDP--QHNLDLIDDAAARASE--QGAQ--LLLTPELFG-F-G-YVP---S-------QICA-Q---V--S-----AE----QVDAARSRLRGIARDRGIALVW-SLP--G--P---E---G--PEQR---GITAELADEHGEVLASYQKVQL-----------YG-------P-------E--------EKAAFVPG------EQ------P-PPVLSW-GGRQLSLLVAYDVEFPE---MVR------AAA------ARGA-QLV-LV-PTAL-----A-G--------D-E-TSVPGILLPARA--VENGITLAYANHCG----P-EG----G-L-VFD-----------GGSVVVGPAGQPL-GE-LGVE-PGL---LV--VDLP----------ADYL-QD-RRAELH----------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 82.6924% -86 - C2 -4IZV ? A:[22-279] --------------------------------------------------------------------RIALMQ-------HTARPLDP--QHNLDLIDDAAARASE--QGAQ--LLLTPQLFG-F-G-YVP---S-------QICA-Q---V--S-----AE----QVDAARSRLRGIARDRGIALVW-SLP--G--P---E---G--PEQR---GITAELADEHGEVLASYQKVQL-----------YG-------P-------E--------EKAAFVPG------EQ------P-PPVLSW-GGRQLSLLVAYDVEFPE---MVR------AAA------ARGA-QLV-LV-PTAL-----A-G--------D-E-TSVPGILLPARA--VENGITLAYANHCG----P-EG----G-L-VFD-----------GGSVVVGPAGQPL-GE-LGVE-PGL---LV--VDLPD---------ADYL-QD-RRAELH----------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 82.1725% -94 - C2 -2GGK - DCAS_RHIRD A:[26-298] -----------------------------------------------------------------------------------------------GRLLDMLTNAAS--RGVN--FIVFPELAL-T-T-FFP---RWHFTDEAEL-D-S---FYET-----EM----PGPVVRPLFETAAELGIGFNLGYAEL--V--V---E---GGVKRRF---N-TSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQ-------H-------L---------EKRYFEP------GDL-----G-FPVYDV-DAAKMGMFICNDRRWPE---TWR------VMG------LKGA-EII-CG-GYNT-----P-THNPPVPQHD-H-LTSFHHLLSMQAGSYQNGAWSAAAGKVG----M-EE----G-C-MLL-----------GHSCIVAPTGEIVALT-TTLE-DEV---ITAALDLDRCRELREHIFN--FKAH-RQPQHY----------------------------------------------------------------------------------------------------------------------------------------
45 Fugue 82.0424% -91 - C2 -2VHH - ? A:[6-386] LKNLNDCLEKHLPPDELKEVKRILYGVEEDQTLELPTSAKDIAEQNGFDIKGYRFTAREEQTRKRRIVRVGAIQNSIVIPTTAPIEKQR--EAIWNKVKTMIKAAAE--AGCN--IVCTQEAWT-M-P-F-A---F-------EF-A--------E-----EA----ENGPTTKMLAELAKAYNMVIIHSILE--RDME---H---G--ETIW---N-TAVVISNSGRYLGKHRKNHI-----------PR-------M----------------------EG------NT------G-HPVFET-EFGKLAVNICYGRHHPQ---NWM------MFG------LNGA-EIV-FN-PSAT-----I-G--------R-LSEPLWSIEARNAA--IANSYFTVPINRVG----T-EQ----F-P-FY------------GSSYVAAPDGSRT-PS-LSRDKDGL---LVVELDLNLCRQVKDFWGF--R-MT-QRVPLYAESFKKASEHGFKPQIIKET--------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 82.0125% -94 - C2 -1FO6 DCAS_RHIRD A:[26-298] -----------------------------------------------------------------------------------------------GRLLDMLTNAAS--RGVN--FIVFPELAL-T-T-FFP---RWHFTDEAEL-D-S---FYET-----EM----PGPVVRPLFETAAELGIGFNLGYAEL--V--V---E---GGVKRRF---N-TSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQ-------H-------L---------EKRYFEP------GDL-----G-FPVYDV-DAAKMGMFICNDRRWPE---TWR------VMG------LKGA-EII-CG-GYNT-----P-THNPPVPQHD-H-LTSFHHLLSMQAGSYQNGAWSAAAGKVG----M-EE----G-C-MLL-----------GHSCIVAPTGEIVALT-TTLE-DEV---ITAALDLDRCRELREHIFN--FKAH-RQPQHY----------------------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 81.9234% -96 - C2 -2E11 ? B:[27-258] ----------------------------------------------------------------------------------------------------ALLEPLA--GQSD--LVILPETFT-S-G-FS----N-------EA-I-D---K--A-----ED----MDGPTVAWIRTQAARLGAAITGSVQL--R--T---E---H--GVFN---R-LLWATPD--GALQYYDKRHL-----------FR-------F-------G--------NEHLRYAA------GR------E-RLCVEW-KGWRINPQVCYDLRFPV---FCRNRFDVERPG------QLDF-DLQ-LF-VANW-----P-S--------A-R-AYAWKTLLRARA--IENLCFVAAVNRVG----V-DG----N-QLHYA-----------GDSAVIDFLGQPQ-VE-IREQ-EQV---VTTTISAAALAEHRARFPA--M-LD-----------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 81.4430% -81 - C2 -2E11 ? A:[3-264] ------------------------------------------------------------------DLRISLVQ-------GSTRWHDP--AGNRDYYGALLEPL-A--GQSD--LVILPETFT-S-G-FSN---E-------AI-D-K---A--E-----DM----DGP-TVAWIRTQAARLGAAITGSVQL-----R---T---E--HGVF---N-RLLWATPDGA-LQYYDKRHL-----------FR-------F-------G--------NEHLRYAA------GR------E-RLCVEW-KGWRINPQVCYDLRFPV---FCR------NRFDVERPGQLDF-DLQ-LF-VANW-----P-S--------A-R-AYAWKTLLRARA--IENLCFVAAVNRVG----V-DGN---Q-L-HYA-----------GDSAVIDFLGQPQ-VE-IREQ-EQV---VTTTISAAALAEHRARFPA--M-LD-GDSFVL----------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 67.9930% -98 - C2 -4HG3 NIT2_YEAST A:[141-340] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVR---N-VLLYIDHEGKILQEYQKLHL-----------FDVDVPNGPI-------L--------KESKSVQP------GK------AIPDIIES-PLGKLGSAICYDIRFPE---FSL------KLR------SMGA-EILCFP-SAFT-----I-K--------T-G-EAHWELLGRARA--VDTQCYVLMPGQVGMHDLS-DPEWEKQ-S-HMSALEKSSRRESWGHSMVIDPWGKII-AH-ADPS-TVGPQLILADLDRELLQEIRNKMPL--W-NQ-RRDDLF----------------------------------------------------------------------------------------------------------------------------------------