@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0385: (2016-03-15 )
MNLKKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASAFLYGLFSDESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE

Atome Classification :

(20 SA) .........10........20....---....30....-....40........50........60........70........80........90......----..100.-.--....--.110........120........130.......140.......-150-.-.-.....160.......170.......180......--.190.....-..200.........210....-..-.220...--....230.......240.......--250.......260.......270.......280--...-----------.--------------....290.......300.......310.......320...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNLKKHSERKFDLITVGRACIDLNA---VEYNRPMEET-MTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRK----VGLAFT-E--IKSP--DE-CSILMYRENVA-DLYLTPEEISEDYIKEARVLLISGTALA-QSP-S-R-EAVLKAVSLARKNDVVVAFELDYRPYTWKNSEET--AVYYSLVAE-QAD--VIIGTRDEFDMMENQV-GG-KNEATKA--YLFQHQAKIVVIKHGVEGSFAYTK--AGETFQAQAYKTKVLKTFGAGDSYASAFLYGL---FSD-----------E--------------SIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE
56 HHSearch 99.3472%-100 - C1 -2QCV IOLC_BACHD A:[7-326] -----STDREFDLIAIGRACIDLNA---VEYNRPMEET-MTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHK----TGLAFT-E--IKSP--EE-CSILMYRQDVA-DLYLSPEEVNEAYIRRSKLLLVSGTALS-KSP-S-R-EAVLKAIRLAKRNDVKVVFELDYRPYSWETPEET--AVYYSLVAE-QSD--IVIGTREEFDVLENRT-EKGDNDETIR--YLFKHSPELIVIKHGVEGSFAYTK--AGEAYRGYAYKTKVLKTFGAGDSYASAFLYAL---ISG-----------K--------------GIETALKYGSASASIVVSK-----AMPSVEEIEALIEKD-
1 PsiBlast_PDB 98.1971% -99 * C1 *2QCV IOLC_BACHD A:[8-327] ------TDREFDLIAIGRACIDLNA---VEYNRPMEET-MTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHK----TGLAFT-E--IKSP--EE-CSILMYRQDVA-DLYLSPEEVNEAYIRRSKLLLVSGTALS-KSP-S-R-EAVLKAIRLAKRNDVKVVFELDYRPYSWETPEET--AVYYSLVAE-QSD--IVIGTREEFDVLENRTEKG-DNDETIR--YLFKHSPELIVIKHGVEGSFAYTK--AGEAYRGYAYKTKVLKTFGAGDSYASAFLYAL---ISG-----------K--------------GIETALKYGSASASIVVSK-----AMPSVEEIEALIEKDE
73 HHSearch 75.6926% -77 - C1 -2V78 - KDGK_SULSO A:[2-312] ----------VDVIALGEPLIQFNS---FNPGP-LRFV-NYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVD-NESF----TGIYFI-Q--RGYPIPMK-SELVYYRKGSA-GSRLSPEDINENYVRNSRLVHSTGITLA-ISDNA-K-EAVIKAFELAKS----RSLDTNIRPKLWSSLEKA--KETILSILK-KYDIEVLITDPDDTKILLDVT-D---PDEAYR--KYKELGVKVLLYKLGSKGAIAYKD--NV-KAFKDAYKVPVEDPTGAGDAMAGTFVSLY---LQG-----------K--------------DIEYSLAHGIAASTLVITVRGDNELTPTLEDAERFLNEFK
61 HHSearch 75.4127% -78 - C1 -3PL2 - ? A:[7-316] --------STHEVLAIGRLGVDIYP---LQSGVGLADV-QSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATD-QTFK----TPVTFC-E--IFPP--DD-FPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFS-EEP-S-R-GTHREILTT-RANRRHTIFDLDYRPMFWESPEEA--TKQAEWALQ-HST--VAVGNKEECEIAVGET-E---PERAGR--ALLERGVELAIVKQGPKGVMAMTK--D-ETVEVPPFFVDVINGLGAGDAFGGALCHGL---LSE-----------W--------------PLEKVLRFANTAGALVASRLECSTAMPTTDEVEASLN---
2 PsiBlast_PDB 75.1527% -82 - C1 -3PL2 - ? A:[10-316] -----------EVLAIGRLGVDIYP---LQSGVGLADV-QSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATD-QTFK----TPVTFC-E--IFPP--DD-FPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFS-EEP-S-R--GTHREILTTRANRRHTIFDLDYRPMFWESPEEA--TKQAEWALQ-HST--VAVGNKEECEIAV-----G-ETEPERAGRALLERGVELAIVKQGPKGVMAMTK---DETVEVPPFFVDVINGLGAGDAFGGALCHGL---LSE-----------W--------------PLEKVLRFANTAGALVASRLECSTAMPTTDEVEASLN---
59 HHSearch 74.1125% -91 - C1 -3LJS - ? A:[4-328] ---------KKTILCFGEALIDMLA---QPLVKK-GMP-RAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRT-STAK----TALAFV-A--LDAH--GE-RSFSFYRPPAA-DLLFRVEHFQDASFSDALIFHACSNSMT-DAD-I-A-EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENP--ASRLWKGLS-LAD--VVKLSSEELDYLANTL-AA-DANAVIQ--QLWQGRAQLLLVTDAAGPVHWYTR--TA-GGEVPT-----------GDAFVGGMLYTF---AQQ-----------FDDAAALIDFCHDPESIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLIQE--
17 PsiBlast_PDB 73.7525% -97 - C1 -3LKI - ? A:[7-326] ------------ILCFGEALIDMLAQPLVKKGMPR-----AFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVR-TSTAK----TALAFV-A--L--H--GE-RSFSFYRPPAA-DLLFRVEHFQDASFSDALIFHACSNSMT-DAD-I-A-EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENP--ASRLWKGLS-LAD--VVKLSSEELDYLANTL-AA-DANAVIQ--QLWQGRAQLLLVTDAAGPVHWYTRTAGGEV---PTF----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPE--------------SIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLI----
13 PsiBlast_PDB 73.6326% -74 - C1 -2DCN ? A:[4-308] ------------LITLGEILIEFNA---LSPG-PLRHV-SYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSA-P----TGIFFI-QRHYPVP--LK-SESIYYRKGSA-GSKLSPEDVDEEYVKSADLVHSSGITLAISST-A-K-EAVYKAFEIASNR----SFDTNIRLKLWSAEEAK--REILKLLSKFHLK--FLITDTDDSKII---L-GE-SDPDKAA--KAFSDYAEIIVMKLGPKGAIVYYD---GKKYYSSGYQVPVEDVTGAGDALGGTFLSLY---YKG-----------F--------------EMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLRE--
10 PsiBlast_PDB 73.3425% -99 - C- -1V1B KDGK_THET8 A:[2-301] ----------LEVVTAGEPLVALVP---QEPGH-LRGK-RLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDL------THFRRAPGFTGLYLR-E--YLPL--GQ-GRVFYYRKGSA-GSALAPGAFDPDYLEGVRFLHLSGITPA-LSPEA-R-AFSLWAMEEAKRRGVRVSLDVNYRQTLW-SPEEA--RGFLERALP-GVD--LLFLSEEEAELLFGRV-----EEALRA--L----SAPEVVLKRGAKGAWAFVD---GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGA---VWG-----------L--------------PVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL----
16 PsiBlast_PDB 72.5225% -96 - C1 -3LJS - ? A:[7-326] ------------ILCFGEALIDMLAQPLVKKGMPR-----AFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVR-TSTAK----TALAFV-A--LDAH--GE-RSFSFYRPPAA-DLLFRVEHFQDASFSDALIFHACSNSMT-DAD-I-A-EVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENP--ASRLWKGLS-LAD--VVKLSSEELDYLANTL-AA-DANAVIQ--QLWQGRAQLLLVTDAAGPVHWYTRTAGGEV---PT-----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPE--------------SIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLI----
14 PsiBlast_PDB 72.3826% -75 - C1 -1WYE - ? A:[4-308] ------------LITLGEILIEFNA---LSPG-PLRHV-SYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSA-P----TGIFFI-QRHYPVP--LK-SESIYYRKGSA-GSKLSPEDVDEEYVKSADLVHSSGITLAISST-A-K-EAVYKAFEIASNR----SFDTNIRLKLWSAEEAK--REILKLLSKFHLK--FLITDTDDSKII---L-GE-SDPDKAA--KAFSDYAEIIVMKLGPKGAIVYYD---GKKYYSSGYQVPVEDVTGAGDALGGTFLSLY---YKG-----------F--------------EMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLRE--
9 PsiBlast_PDB 72.2225% -86 - C1 -1V1A KDGK_THET8 A:[2-301] ----------LEVVTAGEPLVALVP---QEPGH-LRGK-RLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDL------THFRRAPGFTGLYLR-E--YLPL--GQ-GRVFYYRKGSA-GSALAPGAFDPDYLEGVRFLHLSGITPA-LSPEA-R-AFSLWAMEEAKRRGVRVSLDVNYRQTLW-SPEEA--RGFLERALP-GVD--LLFLSEEEAELLFGRV-----EEALRA--L----SAPEVVLKRGAKGAWAFVD---GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGA---VWG-----------L--------------PVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL----
7 PsiBlast_PDB 72.0027% -69 - C1 -2VAR KDGK_SULSO A:[3-303] -----------DVIALGEPLIQFNS---FNPG-PLRFV-NYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESF-----TGIYFI-QRGYPIP--MK-SELVYYRKGSA-GSRLSPEDINENYVRNSRLVHSTGITLA-ISD-NAK-EAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKY-DIE--VLITDPDDTKILLD-V-TD-PDEAYRK--YK-ELGVKVLLYKLGSKGAIAYKD--NVKAFK-DAYKVPVEDPTGAGDAMAGTFVSLY---LQG-----------K--------------DIEYSLAHGIAASTLVITVRGDNELTPTLED---------
8 PsiBlast_PDB 71.8525% -82 - C1 -1V19 KDGK_THET8 A:[2-301] ----------LEVVTAGEPLVALVP---QEPGH-LRGK-RLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDL------THFRRAPGFTGLYLR-E--YLPL--GQ-GRVFYYRKGSA-GSALAPGAFDPDYLEGVRFLHLSGITPA-LSPEA-R-AFSLWAMEEAKRRGVRVSLDVNYRQTLW-SPEEA--RGFLERALP-GVD--LLFLSEEEAELLFGRV-----EEALRA--L----SAPEVVLKRGAKGAWAFVD---GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGA---VWG-----------L--------------PVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL----
6 PsiBlast_PDB 71.8027% -71 - C1 -2V78 - KDGK_SULSO A:[3-303] -----------DVIALGEPLIQFNS---FNPG-PLRFV-NYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESF-----TGIYFI-QRGYPIP--MK-SELVYYRKGSA-GSRLSPEDINENYVRNSRLVHSTGITLA-ISD-NAK-EAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKY-DIE--VLITDPDDTKILLD-V-TD-PDEAYRK--YK-ELGVKVLLYKLGSKGAIAYKD--NVKAFK-DAYKVPVEDPTGAGDAMAGTFVSLY---LQG-----------K--------------DIEYSLAHGIAASTLVITVRGDNELTPTLED---------
15 PsiBlast_PDB 71.4527% -82 - C1 -4DU5 ? A:[27-333] ----------LDVITFGEAMMLLVA----DRPGPLEHA-EAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDAT-QK----TGFQFKGK--VTDG-----PPVEYHRKGSA-ASHMGVADIDEAWLLSARHLHATGVFPA-ISA-T-TLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELM--RDAINDLAT-RAD--WVLPGMEEGRFLTGET----TPEGVAR--FYRQLGAKLVVVKLGAEGAYFDGE--AGSGRVAGFP-------VGAGDGFAVGVISAL---LDG-----------L--------------GVPEAVKRGAWIGARAVQ------GLPTRAELNA------
67 HHSearch 70.7224%-102 - C- -1V1A KDGK_THET8 A:[1-302] ---------MLEVVTAGEPLVALVP---QEPG-HLRGK-RLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRA--PGF----TGLYLR-E--YLPL--GQGRVFYYRKG-SA-GSALAPGAFDPDYLEGVRFLHLSGITPA-LSP-EAR-AFSLWAMEEAKRRGVRVSLDVNYRQTLWSP-EEA--RGFLERALP-GVD--LLFLSEEEAELLFGRV-E-----EA-----LRALSAPEVVLKRGAKGAWAFVD--G-RRVEGSAFAVEAVDPVGAGDAFAAGYLAGA---VWG-----------L--------------PVEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK---
11 PsiBlast_PDB 70.3325% -83 - C1 -1V1S - KDGK_THET8 A:[2-301] ----------LEVVTAGEPLVALVP---QEPGH-LRGK-RLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDL------THFRRAPGFTGLYLR-E--YLPL--GQ-GRVFYYRKGSA-GSALAPGAFDPDYLEGVRFLHLSGITPA-LSPEA-R-AFSLWAMEEAKRRGVRVSLDVNYRQTLW-SPEEA--RGFLERALP-GVD--LLFLSEEEAELLFGRV-----EEALRA--L----SAPEVVLKRGAKGAWAFVD---GRRVEGSAFAVEAVDPVGAGDAFAAGYLAGA---VWG-----------L--------------PVEERLRLANLLGASVAASRGDHEGAPYREDLEVLL----
58 HHSearch 70.0423% -84 - C1 -1TYY ? A:[25-328] ----------NKVWVIGDASVDLVP---EKQN--------SYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLD-ADLT----SAVLIV-N------------SFTYLVHPGA-DTYVSPQDLP--PFRQYEWFYFSSIGLT-DRP-A-R-EACLEGARRMREAGGYVLFDVNLRSKMWGNTDEI--PELIARSAA-LAS--ICKVSADELCQLSGAS-H---WQDARY--YLRDLGCDTTIISLGADGALLITA--EG-EFHFPAPRVDVVDTTGAGDAFVGGLLFTL---SRA-----------NCWDHA---------LLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLS---
57 HHSearch 68.7520% -77 - C1 -3IQ0 ? A:[4-313] ----------SKVFTIGEILVEIMA---SKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVL-PLEA----TGSAFV-T--YHN------RDFIFNIKNAA-CGKLSAQHVDENILKDCTHFHIMGSSLF-SFH-M-V-DAVKKAVTIVKANGGVISFDPNIRKEMLD-IPEM--RDALHFVLE-LTD--IYMPSEGEVLLLSPHS-T---PERAIA--GFLEEGVKEVIVKRGNQGASYYSA--NE-QFHVESYPVEEVDPTGAGDCFGGAWIACR---QLG-----------F--------------DAHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQRH-