@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0386: (2016-03-15 )
VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFGHGNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQKNRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATRQPDPVLQQLEHESSAAITTNDGFQAVSRYFDRVQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTKRELTEAARLIQASKTPVIIVGGGARYSDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGPATKFININVSRMQTYKLDAFQVVGDAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQTEFTQTEALITINDTVAPDSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALEDAKKQTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY

Atome Classification :

(20 SA) .........10........20........30........40--.--.......50........60........70........80-........90........100.......110.......120...-....130.......140.......-----150.....----..160.......170.......180.......190.......200..-.-....210-.--..-----.....-------.220.......---230.......-240-..-.....250.......260.......270.......280-.-..----..-..290.......300.......310.......320--------...---------.....330...---....-340..--.--.--....350.......360.......370.......380.......390.......400.......410...----....420.......430---..---.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530-.......540--.........550.......560.......570.......580--..--.----.....590.......600.......610.......620.......630......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VTEKTIRLTTAQALVKFLNQQYIEVDDEMAPFVDGIFTVFG--H--GNVVGIGQALEEDPGHLNVYQGKNEQGMAHAAIAYAKQK-NRKRIYACSASAGPGSANLITAASTALANNLPVLFLPADTFATR-QPDPVLQQLEHESSAAITTNDGFQ-----AVSRYFDR----VQRPEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFF-Q-KRIHY---L--NR-----QIPTK-------RELTEAARLIQ---ASKTPVIIVG-GGA-RY-SDAREELIALSEQSNIPLVETHAGKSTVEFDFKNNLGG-T-GI----LG-TLAANKAIRDADLVIGIGTRYTDFTTSSKTAFGP---------ATK---------FININVSRMQT---YKLD-A-FQV--V--G--DAKATLAELAPLLKGYQTQFGDRIAVYKAEWLAERTRLQNTKFNREAFTPEIKDQFDQATLNEYADSLQT----EFTQTEALITINDTV-----AP---DSIVVCSAGSLPGDLQRLWNPAVPNTYHLEYGYSCMGYEINGALGAKMAAANNQEVYSIVGDGSFCMSHSELLTSLQYGKKINIMLFDNSGFGCINNLQM-ANGSDSFF----CEFRDSDNQIMQVDYAKIAEGYGAKVYRANTKEDLISALED---AK--K----QTKTTLIDMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQAYEEKQTNLKNARLY
28 HHSearch 87.4323% -74 - C5 -3EYA POXB_ECOLI A:[2-535] ------KQTVAAYIAKTLESAG----------VKRIWGVTG--D---SLNGLSDSLNRM-GTIEWMSTRHEEVAAFAAGAEAQLS-G--ELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSE-IGSGYFQE--------THPQELFR-----ECSHYCEL----VSSPEQIPQVLAIAMRKAVL--NRGVSVVVLPGDVALKPAPEGATMH-W-YHA-P---Q--PV-----VTPEE-------EELRKLAQLLR---YSSNIALMCG-SGC-AG---AHKELVEFAGKIKAPIVHALRGKEHVEYDNPYDVGM-T-GL----IG-FSSGFHTMMNADTLVLLGTQFPYRAF-----YPT---------DAK---------IIQIDINPASI---GAHSKVDMAL--V--G--DIKSTLRALLPLVEEK-ADRKF-----LDKALEDYRDARKGL-------------------DDLAKPSEK----AIHPQYLAQQISHFA-----AD---DAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQATEP-ERQVVAMCGDGGFSMLMGDFLSVVQMKLPVKIVVFNNSVLGFV----------------------GTE--LHDTNFARIAEACGITGIRVEKASEVDEALQR---AF--S----IDGPVLVDVVVAKEELAIP-----------------------------------
23 HHSearch 87.0423% -65 - C5 -1T9B ILVB_YEAST A:[77-642] --TSFVGLTGGQIFNEMMSRQN----------VDTVFGYPG--G---AILPVYDAIHNS-DKFNFVLPKHEQGAGHMAEGYARAS-G--KPGVVLVTSGPGATNVVTPMADAFADGIPMVVFTGQVPTSA-IGTDAFQE--------ADVVGISR-----SCTKWNVM----VKSVEELPLRINEAFEIATS-GRPGPVLVDLPKDVTAAILRNPIP-------------------------FVM-------QSINKAADLIN---LAKKPVLYVG-AGI-LNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDM-L-GM----HG-CATANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGG---------IIHFEVSPKNI---NKVVQTQIAV--E--G--DATTNLGKMMSKIFPVKER---------SEWFAQINKWKKEYP-Y--------------AYM--EETPGS----KIKPQTVIKKLSKVA-----NDTGRHVIVTTGVGQHQMWAAQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVAKP-ESLVIDIDGDASFNMTLTELSSAVQAGTPVKILILNNEEQGMVTQWQS-----LFYE----HRYSHTH--QLNPDFIKLAEAMGLKGLRVKKQEELDAKLKE---FV--S----TKGPVLLEVEVDKKVPVL------------------------------------
35 HHSearch 86.7923% -67 - C5 -1V5E ? A:[2-541] -----NKINIGLAVMKILESWG----------ADTIYGIPS--G---TLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFG-G--NLGVTVGSGGPGASHLINGLYDAAMDNIPVVAILGSRPQRE-LNMDAFQE--------LNQNPMYD-----HIAVYNRR----VAYAEQLPKLVDEAARMAI--AKRGVAVLEVPGDFAKVEIDNDQWYSSA-NSLRK---Y--AP-----IAPAA-------QDIDAAVELLN---NSKRPVIYAG-IGT-MG-H--GPAVQELARKIKAPVITTGKNFETFEWDFEALTGS-T-YR----VG-WKPANETILEADTVLFAGSNFPFSEVEGT--FRN---------VDN---------FIQIDIDPAML---GKRHHADVAI--L--G--DAALAIDEILNKVDAV-EESAWW-----TANLKNIANWREYI-------------------NMLETKEEG----DLQFYQVYNAINNHA-----DE---DAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYP-DRQVWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYE-----DTNK-----NLFGVD--FTDVDYAKIAEAQGAKGFTVSRIEDMDRVMAE---AV--AANK-AGHTVVIDCKITQDR---------------------------------------
19 PsiBlast_PDB 85.8924% -64 - C5 -2DJI ? A:[18-537] ----------------------------------GADTIYGIPS--GTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVM--QSK-FGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAI----LGSR-PQ----RELNMDAFQELNQNPMYD-----HIAVYNRR----VAYAEQLPKLVDEAARMAI--AKRGVAVLEVPGDFAKVEIDNDQWYS-SANSLRK---Y--AP-----IAPAA-------QDIDAAVELLN---NSKRPVIYAGIGTM-GH-GPAVQEL---ARKIKAPVITTGKNFETFEWDFEALTGS-T-YR----VG-WKPANETILEADTVLFAGSNFP-FSEVEGT-FRN---------VDN---------FIQIDIDPAML---GKRH-H-ADVAIL--G--DAALAIDEILNKVDAVEES---------AWWTANLKNIANWR--------------------EYINMLETKEEGDLQFYQVYNAINNHA-----DE---DAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYPDRQ-VWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYE-DTNKNLFG----VDFTD-------VDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAAN--K----AGHTVVIDCKI-------------------------------------------
20 PsiBlast_PDB 85.6824% -65 - C5 -1V5F ? A:[17-536] ----------------------------------GADTIYGIPS--GTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVM--QSK-FGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAI----LGSR-PQ----RELNMDAFQELNQNPMYD-----HIAVYNRR----VAYAEQLPKLVDEAARMAI--AKRGVAVLEVPGDFAKVEIDNDQWYS-SANSLRK---Y--AP-----IAPAA-------QDIDAAVELLN---NSKRPVIYAGIGTM-GH-GPAVQEL---ARKIKAPVITTGKNFETFEWDFEALTGS-T-YR----VG-WKPANETILEADTVLFAGSNFP-FSEVEGT-FRN---------VDN---------FIQIDIDPAML---GKRH-H-ADVAIL--G--DAALAIDEILNKVDAVEES---------AWWTANLKNIANWR--------------------EYINMLETKEEGDLQFYQVYNAINNHA-----DE---DAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYPDRQ-VWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYE-DTNKNLFG----VDFTD-------VDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAAN--K----AGHTVVIDCKI-------------------------------------------
18 PsiBlast_PDB 85.0124% -65 - C5 -1V5E ? A:[18-537] ----------------------------------GADTIYGIPS--GTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVM--QSK-FGGNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAI----LGSR-PQ----RELNMDAFQELNQNPMYD-----HIAVYNRR----VAYAEQLPKLVDEAARMAI--AKRGVAVLEVPGDFAKVEIDNDQWYS-SANSLRK---Y--AP-----IAPAA-------QDIDAAVELLN---NSKRPVIYAGIGTM-GH-GPAVQEL---ARKIKAPVITTGKNFETFEWDFEALTGS-T-YR----VG-WKPANETILEADTVLFAGSNFP-FSEVEGT-FRN---------VDN---------FIQIDIDPAML---GKRH-H-ADVAIL--G--DAALAIDEILNKVDAVEES---------AWWTANLKNIANWR--------------------EYINMLETKEEGDLQFYQVYNAINNHA-----DE---DAIYSIDVGNSTQTSIRHLHMTPKNMWRTSPLFATMGIAIPGGLGAKNTYPDRQ-VWNIIGDGAFSMTYPDVVTNVRYNMPVINVVFSNTEYAFIKNKYE-DTNKNLFG----VDFTD-------VDYAKIAEAQGAKGFTVSRIEDMDRVMAEAVAAN--K----AGHTVVIDCKI-------------------------------------------
16 PsiBlast_PDB 84.3225% -52 - C5 -1POX POXB_LACPL A:[18-567] --------------------------------VDHLYGIPG-----GSINSIMDALSAERDRIHYIQVRHEE--VGAMAAAADAK-LTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTG-MNMDTFQEMNENPIYADVADYNVT-----AV----NA----ATLPHVIDEAIRRAY------AHQGVAVVQIPVDLPWQQISAE-DWY-A-SANNY---Q--TP-----LLPEPDV-----QAVTRLTQTLL---AAERPLIYYG-IGA-R---KAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGS-A-NR----VA-QKPANEALAQADVVLFVGNNYP-FAEVSK-AFKN---------TRY---------FLQIDIDPAKLGKRHKTD---IAV--L--A--DAQKTLAAIL-------AQVSER---ESTPWW--QANLANVK-NWRAYLASLEDK-QEGPLQAY---------------QVLRAVNKIA-----EP---DAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQ-VFNLAGDGGASMTMQDLVTQVQYHLPVINVVFTNCQYGFIKDEQE-DTNQNDFIG---VEFND-------IDFSKIADGVHMQAFRVNKIEQLPDVFEQ---AKAIA----QHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIEAFKQRYE------------
10 PsiBlast_PDB 83.7925% -53 - C5 -2EZT POXB_LACPL A:[26-575] --------------------------------VDHLYGIPG-----GSINSIMDALSAERDRIHYIQVRHEE--VGAMAAAADAK-LTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTG-MNMDTFQEMNENPIYADVADYNVT-----AV----NA----ATLPHVIDEAIRRAY------AHQGVAVVQIPVDLPWQQI--PAEDW-Y-ASANS---Y--QT-----PLLPE-------PDVQAVTRLTQTLLAAERPLIYYG-IGA-R---KAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGS-A-NR----VA-QKPANEALAQADVVLFVGNNYP-FAEVSK-AFKN---------TRY---------FLQIDIDPAKLGKRHKTD---IAV--L--A--DAQKTLAAIL-------AQVSEREST---PWW--QANLANVK-NWRAYLASLEDK-QEGPLQAY---------------QVLRAVNKIA-----EP---DAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQ-VFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGWIKDEQEDTNQNDFIG----VEFND-------IDFSKIADGVHMQAFRVNKIEQLPDVFEQ---AKAIA----QHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIEAFKQRYE------------
13 PsiBlast_PDB 83.7025% -51 - C5 -4FEG ? A:[26-575] --------------------------------VDHLYGIPG-----GSINSIMDALSAERDRIHYIQVRHEE--VGAMAAAADAK-LTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTG-MNMDTFQEMNENPIYADVADYNVT-----AV----NA----ATLPHVIDEAIRRAY------AHQGVAVVQIPVDLPWQQI--PAEDW-Y-ASANS---Y--QT-----PLLPE-------PDVQAVTRLTQTLLAAERPLIYYG-IGA-R---KAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGS-A-NR----VA-QKPANEALAQADVVLFVGNNYP-FAEVSK-AFKN---------TRY---------FLQIDIDPAKLGKRHKTD---IAV--L--A--DAQKTLAAIL-------AQVSER---ESTPWW--QANLANVK-NWRAYLASLEDK-QEGPLQAY---------------QVLRAVNKIA-----EP---DAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQ-VFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDFIG----VEFND-------IDFSKIADGVHMQAFRVNKIEQLPDVFEQ---AKAIA----QHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIEAFKQRYE------------