@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0457: (2016-03-15 )
MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPIKLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPMEAGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIGIMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRETSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTNSEVIVHFQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTDKGIETVGPRYFGYDVDFEPLEELVKKEERRHV
Atome Classification :
(20 SA)
-----------------.....---....10----........--20........30--.........40.-----.......----50........60.....---------...70.---------------.....-.--.-80...-------------.....90----.-----.......100..-.....110----..-....-----..120.......-130---.......----------.140----.........---150.....---..160-.-.-----.----......-------170.-----...---------..-------------------------.--180.......190.........200--..--.--......210--------.....---....220....-----...230.-..------...---.240..-------------......250.....-----------..---------------------260.-.-----.....----.------270.....-..280---------.......--.--.290.......300-.------.....-..310--------.-----------..----------....-.-----320-..-.--..----..------------..330..------.....340.........350.......360.....--------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------MRY
L
D
---
E
Q
A
I
E
N
----IAI
G
A
A
F
L
--GTGGGGD
P
Y
I
G
---
K
M
M
A
L
T
A
IKKHG-----
P
I
K
LL
S
P
----
E
EIADDDYFI
P
A
A
M
MG
A
---------
P
S
V
L
I
E
---------------KFPKG-
D
--
E
-
F
V
R
V
F
-------------
E
K
L
G
R
Y
V
----
G
-----
K
EVKGTFPMEAG-GVN
S
M
I
P
-----
I
V
-
V
A
A
Q-----LGL
P
M
VDCDGMG-R-A---FP
E
L
Q
M
V
----------
T
F
------
H
LDGISAT
P
---
M
A
I
TDEKG---NI
G
---
I
-
M
-----
E
----
T
I
D
N
K
W
-------
T
E
R
L
-----
A
R
V
---------
T
T
-------------------------
V
--EMGA
S
S
L
V
S
L
Y--PCNG
A
Q
I
K
Q
S
----
S
I
--
K
--
N
I
V
T
L
S
E
----------
E
I
G
K
V
---
I
R
ETS
M
D
E
A
E
K
-----
L
Q
K
L
L
D
V
-TH------G
Y
H
---LFE-
G
K
-------------
I
T
D
V
V
R
E
T
RAGFNF-----------G
R
---------------------
V
-
K
I
-D-----GLNKD----T------NS
E
V
I
V
H
F-QNE-----------
N
L
V
AEKN--G--
E
P
I
A
ITPD
L
I
C
M
V--
D
------
L
E
T
LM-P
V
T
T
---------
E
-----------
A
L
----------KYG
K
-
R
-----
V
---
R
V
-
M
--
A
L----PA------------DDAWRTD------KGIETV--GPRYFGYDV
D
F
E
P
L
E
E
L
V
K
K
-
E
E
RRHV--------
21
HHSearch
84.28
25%
5
- C6 -
2O3I
-
?
A:
[2-390]
-----------------
A
F
E
L
S
---
P
S
D
L
E
P
----
L
L
Q
G
A
C
F
F
--
G
S
G
G
G
G
T
M
-
I
S
---
A
R
H
L
A
A
N
F
R
K
G
D
YYPTD
K
V
R
V
V
D
V
----
D
E
A
T
D
G
D
-
C
V
M
V
A
Y
M
G
A
---------
P
D
A
I
N
Q
V--------------
Q
W
P
N
G
P
V
--
E
A
A
L
A
A
R
-------------
Q
R
L
E
-
S
Q
----
G
-----
R
K
L
A
Y
V
V
A
P
E
S
G
-
A
L
G
F
V
V
A
-----
S
L
-
V
A
A
K
-----
L
G
L
A
V
V
D
A
D
G
A
G
-
R
-
A
---
V
P
S
L
P
M
L
----------
T
Y
------
A
A
A
G
V
P
P
T
P
---
A
F
L
A
G
E
S
G
---
L
C
V
---
E
-
L
-----
G
V
R
M
P
P
P
D
---RED
I
S
T
V
V
E
Q
M
-----
L
R
P
---------
I
L
-------------------------
T
NP
Q
F
G
Q
F
G
G
L
A
M
W
--
M
M
S
P
A
Q
L
G
G
A
L
---
P
V
--
R
--
G
T
L
S
R
A
L
----------
K
L
G
R
A
---
L
Q
D
G
K
V
---
K
T
-----
A
E
A
M
L
D
F
-
L
R
R
ELDIK
G
K
L
---
L
F
G
P
A
T
-------------
L
A
S
P
---------------------
G
K
---------------------
V
-
V
L
-
E
-----
D
G
--------------
E
R
R
C
T
V
L
Y
-
Q
N
E
-----------
S
L
L
A
W
D
S
AL
S
--
H
P
L
A
T
A
P
D
A
I
S
Y
F
--
V
------
E
G
E
G
Q
H
V
F
S
N
---------
G
-----------
D
L
SGNDHGLDPS
V
R
G
R
-
K
-----
A
---
A
V
-
I
--
A
L
----
P
A
------------
A
A
P
L
S
E
G
------
L
I
L
Q
S
F
A
D
E
L
A
Q
L
G
Y
L
G
P
Y
A
P
V
D
--------------------
1
PsiBlast_PDB
70.64
23%
12
- C6 -
2O3I
-
?
A:
[49-320]
-----------------------------------------------------------------------------
V
R
V
V
D
V
----
D
E
A
T
D
G
D
-
C
V
M
V
A
Y
M
G
A
---------
P
D
A
I
N
Q
V--------------
Q
W
P
N
G
-
P
V
-
E
-
A
A
L
A
A
-------------
R
Q
R
L
E
S
Q
----
G
-----
R
K
L
A
Y
V
V
A
P
E
S
G
-
A
L
G
F
V
V
A
-----
S
L
-
V
A
A
K
-----
L
G
L
A
V
V
D
A
D
G
A
G
-
R
-
A
---
V
P
S
L
P
M
L
----------
T
Y
------
A
A
A
G
V
P
P
T
P
---
A
F
L
A
G
E
S
G
L
C
V
E
L
G
---
V
R
M
-----
P
----
P
P
D
----------
R
E
D
I
-----
S
T
V
V
E
Q
M
L
R
P
I
L
T
N
-------------------------
P
--
Q
F
G
Q
F
G
G
L
A
M
W
--
M
M
S
P
A
Q
L
G
G
A
L
---
P
V
--
R
--
G
T
L
S
R
A
L
----------
K
L
G
R
A
---
L
Q
D
G
K
V
K
T
A
E
A
M
L
D
F
-
L
R
R
E
L
D
I
-
K
G
------
K
L
L
---
F
G
P
-
A
T
-------------
L
A
S
P
---------------------
G
K
---------------------
V
-
V
L
-
E
---------
D
----
G
------
E
R
R
C
T
V
L
Y
-
Q
N
E
-----------
S
L
L
A
W
D
S
--
A
LS
H
P
L
A
T
A
P
D
A
I
--------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
68.69
16%
-47
- C5 -
4XD1
14
?
A:
[21-417]
--M
K
L
I
I
A
G
K
N
N
I
A
V
D
V
T
K
W
I
I
---
K
T
-
I
S
D
----
I
E
L
Y
S
V
C
N
--
E
N
D
H
G
N
D
S
F
------
Q
L
S
F
K
K
F
C
I
Q
F
-----
N
I
P
I
I
S
L
----
E
D
A
Y
H
L
E
D
A
I
F
L
S
L
E
F
D
---------
K
I
I
H
P
S
---------------
K
F
T
H
N
-
R
--
I
-
F
N
I
H
F
-------------
S
Y
L
P
A
Y
K
----
G
-----
M
Y
T
-
S
A
W
P
I
L
N
N
-
E
Q
E
S
G
V
T
-----
L
H
-
K
-------------
I
D
H
G
I
D
T
-
G
-
A
---
I
I
D
Q
Q
K
F
----------
P
L
------
D
I
E
E
T
A
K
T
L
---
Y
L
K
Y
I
K
I
G
---
T
E
I
---
V
-
I
-----
K
----
N
L
P
A
L
I
-------
S
G
N
Y
-----
S
I
V
---------
E
Q
-------------------------
S
--
A
I
K
S
S
----
Y
Y
--
S
K
K
S
I
D
Y
K
N
L
----
M
I
--
D
--
L
N
K
T
-
A
H
----------
E
I
L
Q
Q
---
I
R
A
F
T
F
R
D
Y
Q
----------
L
P
R
-
I
D
------
D
I
D
---
I
F
H
-
G
E
-------------
I
L
S
S
K
S
L
S
K
P
G
T
I
L
-----------
E
K
NNY
H
L
I
L
S
T
I
D
Y
D
I
K
L
Y
S
DN
F
D
-
E
I
-
L
-----
T
A
C
E
D
----
K
------
S
P
E
F
I
S
K
L
L
K
T
E
-----------
N
I
L
F
E
K
N
------
H
L
G
A
S
P
I
I
I
A
A
Y
H
G
N
------
M
D
V
I
E
-
W
L
V
S
---------
K
-----------
G
V
----------
N
I
N
D
-
R
-----
N
YKG
T
T
-
V
--
A
M
----
Y
F
------------
K
D
Y
M
L
R
S
GNYTG
L
E
N
L
I
N
L
--
G
L
D
L
F
L
K
D
N
E
G
L
S
V
F
D
Y
M
R
K
-
N
K
N
I
E
L
F
N
F
M
S
T
FN
34
Fugue
67.26
14%
-43
- C4 -
4D0L
2
PI4KB_HUMAN
A:
[10-566]
S
W
L
L
R
L
F
E
SKLFD
I
S
M
A
I
S
Y
L
Y
N
SK
E
P
G
V
Q
A
----
Y
I
G
N
R
L
F
C
--
F
R
N
E
D
V
D
F
Y
L
P
---
Q
L
L
N
M
Y
I
H
M
D
E
D
-----
V
G
D
A
I
K
P
Y
I
V
H
R
C
R
Q
S
I
N
F
S
L
Q
C
A
L
L
L
G
A
Y
S
SR
G
T
K
L
R
K
L
I
L
S
---------------
R
L
A
P
E
-
R
--
E
-
F
I
K
S
L
-------------
M
A
I
G
K
R
L
----
A
TLPT
K
E
Q
K
T
Q
R
L
I
S
E
L
S
-
L
L
N
H
K
L
P
----------
A
R
-----
V
W
L
P
T
A
G
F
D
H
H
V
-
V
-
R
---
V
P
H
T
Q
A
V
VLNSKDK
A
P
Y
L
I
------
Y
V
E
V
L
E
C
E
N
---
F
D
T
T
S
V
P
A
---
R
I
P
ENP
S
-
A
-----
V
----
A
L
K
E
P
W
-------
Q
E
K
V
-----
R
R
I
---------
R
E
G
SPYGHLPN
W
R
L
L
S
V
I
V
K
CGDDL
R
Q
E
--
L
L
A
F
Q
V
L
K
Q
L
Q
--
S
I
W
E
Q
E
R
V
P
L
----
W
I
--
K
P
Y
K
I
L
V
I
S
A
----------
D
S
G
M
I
E
P
V
V
N
A
V
S
I
H
Q
V
K
K
Q
S
QLS
L
L
D
Y
F
L
Q
-
E
H
------
G
S
Y
TT
E
A
F
L
-
S
A
-------------
Q
R
N
F
V
Q
S
C
A
G
Y
C
L
V
-----------
C
Y
---------------------
L
L
Q
V
-
K
-----
D
R
H
N
G
N
I
L
L
D
------
A
E
G
H
I
I
H
I
-
D
F
G
-----------
F
I
L
--
S
S
--
S
--
S
A
F
K
L
T
T
E
F
V
D
V
M
--
G
GLDG
D
M
F
N
Y
Y
K
-
M
L
M
L
---------
Q
-----------
G
L
----------
I
A
A
R
-
K
H
M
D
K
V
V
---
Q
I
-
V
--
E
I
M
Q
QG
S
Q
------------
L
P
C
F
H
G
S
------
S
T
I
R
N
L
--
K
E
R
-
F
H
M
S
M
T
E
E
Q
L
Q
L
L
V
E
Q
-
M
V
D
G
S
M
RS------
39
Fugue
66.88
16%
-21
- C5 -
4Q9T
-
?
A:
[12-446]
--------------TKI
L
T
E
T
E
---
K
Y
S
V
T
K
----
L
S
T
D
L
S
F
L
--
P
F
E
G
L
V
D
T
A
L
Q
---
K
A
L
V
N
----
D
L
D
-----
H
I
Y
I
W
N
Y
----
N
S
I
Q
K
D
T
P
I
C
K
I
S
L
H
S
S
---------
P
P
I
C
L
F
T
S
S
IN
G
I
C
-------
I
I
N
K
K
-
N
--
S
-
Q
F
L
Y
F
-------------
E
D
I
S
T
I
N
----
N
-----
L
A
H
V
L
D
L
K
L
K
D
N
E
N
I
T
S
T
I
N
CEPS
G
I
I
-
I
A
T
S
-----
L
G
R
V
L
F
I
T
I
K
D
S
-
T
-
G
---
K
P
K
L
---------------------------
E
L
K
---
Q
Q
L
I
K
P
Q
N
---
S
F
F
---
F
-
R
-----
N
----
L
D
S
S
K
E
-------
I
I
S
L
-----
K
K
G
---------
P
I
-------------------------
V
--
G
K
G
E
R
L
L
Y
I
T
T
--
R
G
G
S
L
Q
I
W
Q
L
----
S
I
N
S
K
--
S
F
K
R
L
E
I
----------
N
I
Y
E
H
---
V
L
D
S
L
Q
D
L
Y
P
F
-----
A
H
G
T
L
A
F
-
L
D
------
S
H
P
---
I
Y
S
-
D
---------------
T
S
S
A
H
L
T
L
A
S
I
S
N
-----------
G
N
---------------------
E
-
I
Y
-
Y
L
M
I
T
V
I
L
D
E
K
----
T
------
N
S
F
Q
I
F
S
I
-
Y
K
L
-----------
N
T
Y
F
T
K
S
--
T
--
V
D
L
N
H
K
P
Q
L
F
I
P
N
--
A
------
L
D
S
I
V
-
S
P
T
L
---------
S
-----------
V
Y
----------
V
L
F
N
-
N
-----
A
---
V
V
M
T
--
Q
I
----
S
S
KLDSSFPLRRK
W
E
D
I
I
R
F
N
------
K
D
V
E
I
I
--
G
S
G
Y
-----
S
T
D
S
I
Y
V
I
C
K
D
M
G
V
L
K
I
A
S
H------
5
PsiBlast_PDB
66.55
23%
-40
- C6 -
3J81
-
?
E:
[61-239]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
K
A
I
-----
L
M
Q
R
H
V
K
V
D
G
K
V
-
R
-
T
DTT
F
P
A
G
F
M
D
----------
V
I
------
T
L
E
A
T
N
E
N
F
---
R
L
V
Y
D
V
K
G
---
R
F
A
---
V
-
H
-----
R
----
I
T
D
E
E
A
-------
S
Y
K
L
-----
A
K
V
---------
K
K
-------------------------
V
--
Q
L
G
K
K
G
I
P
Y
V
V
--
T
H
D
G
R
T
I
R
Y
P
DPNI
K
V
--
N
--
D
T
V
K
V
D
L
----------
A
T
G
T
I
---
T
D
F
I
K
F
D
T
G
---------
K
L
V
Y
V
-
T
G
------
G
R
N
---
L
---
G
R
-------------
V
G
T
I
V
H
R
E
R
H
E
G
G
F
-----------
D
L
---------------------
V
-
H
I
----------
K
D
----
S
------
L
E
N
T
F
V
T
R
-
L
N
N
-----------
V
F
V
I
G
E
P
--
G
--
R
P
W
I
S
L
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
65.09
10%
-32
* C5 *
3C7A
10
OCDH_PECMA
A:
[2-404]
---------------------------
T
V
K
V
----
C
V
C
G
G
G
N
G
--
A
H
T
L
S
G
L
A
A
S
R
---
D
G
V
E
V
R
V
L
T
L
F
A
-----
D
E
A
E
R
W
T
----
K
A
L
G
A
D
E
L
T
V
I
V
N
E
K
D
G
---------
T
Q
T
E
V
K
---------------
S
R
P
K
V
-
I
TK
D
-
P
E
I
A
I
-------------
S
G
A
D
V
V
I
L
T
V
P
A
-----
F
A
H
E
G
Y
F
Q
A
M
A
P
-
Y
V
Q
D
S
A
L
-----
I
V
G
L
P
S
Q
-----
A
G
F
E
F
Q
C
R
D
I
L
G
-
D
-
K
---
A
A
A
V
S
M
M
----------
S
F
ETLPWA
C
R
I
K
E
F
G
R
K
---
V
E
V
L
G
T
K
S
---
V
L
A
---
A
-
S
-----
L
----
I
K
G
T
A
K
-------
T
V
D
P
-----
L
S
T
---------
L
Q
-------------------------
M
--
L
H
G
A
E
P
V
F
R
L
A
KH
F
L
E
M
L
I
M
S
Y
S
----
F
V
--
H
--
P
A
I
L
F
G
R
WGSWDGKPVP
E
A
P
L
F
---
Y
Q
G
I
D
Q
A
T
A
D
M
-----
L
T
A
C
S
N
E
-
C
K
------
D
V
A
---
N
A
I
-
M
A
A
C
PGNDLSDVKD
I
Y
Q
W
Y
L
E
Y
Y
H
E
D
I
Q
D
-----------
D
H
---------------------
D
-
L
Y
-
H
-----
A
I
T
T
N
----
K
------
S
Y
K
G
L
V
H
P
-
V
K
A
V
DG
G
V
A
P
D
F
GN
R
Y
L
T
E
D
I
--
P
--
M
G
M
I
V
F
K
G
V
A
I
A
A
--
G
------
V
A
--
I
-
P
S
N
D
---------
K
-----------
L
I
----------
M
W
A
Q
-
E
-----
K
---
I
G
-
K
--
E
Y
----
L
V
------------
D
G
A
L
T
G
K
------
D
V
A
T
T
R
--
C
P
Q
R
Y
G
----
F
N
T
L
D
A
I
L
T
G
-
K
K
H
H
H
H
H-------
6
PsiBlast_PDB
64.61
23%
-33
- C6 -
3JAM
-
?
E:
[61-239]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
K
A
I
-----
L
M
Q
R
H
V
K
V
D
G
K
V
-
R
-
T
DTT
F
P
A
G
F
M
D
----------
V
I
------
T
L
E
A
T
N
E
N
F
---
R
L
V
Y
D
V
K
G
---
R
F
A
---
V
-
H
-----
R
----
I
T
D
E
E
A
-------
S
Y
K
L
-----
A
K
V
---------
K
K
-------------------------
V
--
Q
L
G
K
K
G
I
P
Y
V
V
--
T
H
D
G
R
T
I
R
Y
P
DPNI
K
V
--
N
--
D
T
V
K
V
D
L
----------
A
T
G
T
I
---
T
D
F
I
K
F
D
T
G
---------
K
L
V
Y
V
-
T
G
------
G
R
N
---
L
---
G
R
-------------
V
G
T
I
V
H
R
E
R
H
E
G
G
F
-----------
D
L
---------------------
V
-
H
I
----------
K
D
----
S
------
L
E
N
T
F
V
T
R
-
L
N
N
-----------
V
F
V
I
G
E
P
--
G
--
R
P
W
I
S
L
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------
33
Fugue
64.44
13%
-23
- C5 -
4F0Q
1
?
A:
[5-456]
--------------K
A
D
I
A
W
A
A
---
S
A
E
V
A
N
K
P
R
L
V
F
V
G
D
E
L
R
Y
A
Q
G
A
N
Q
R
D
V
E
L
D
GFV
N
Y
H
W
L
T
S
P
G
G
L
G
-----
L
P
K
V
M
L
E
----
A
G
I
N
A
P
A
E
V
V
G
P
D
R
S
R
R
---------
A
L
I
A
I
R
S
S
PWKAGHETNPWHD
E
F
D
L
D
-
H
--
G
-
H
V
R
Y
F
G
DHKPSTVGLPGE
T
K
G
N
R
L
L
----
L
-----
E
A
A
R
L
H
A
G
T
T
R
E
-
E
R
L
L
A
P
P
-----
L
F
-
L
F
R
A
V
T
---
V
H
R
A
G
R
A
V
V
K
G
H
-
V
-
E
---
F
C
G
A
A
I
I
----------
E
R
------
L
E
H
V
V
Q
R
D
P
ETG
R
S
F
P
N
L
S
L
---
D
L
A
---
V
-
V
S
GGEI
D
----
G
V
D
F
R
W
-------
I
D
D
R
R
NAAL
A
A
G
---------
E
T
-------------------------
L
--
R
H
A
P
E
S
W
I
R
W
V
--
R
Q
G
R
L
A
I
P
G
I
----
R
R
--
R
--
V
L
A
S
A
V
Q
----------
S
S
K
E
Q
---
Q
P
A
S
G
S
A
E
A
A
T
-----
L
Q
T
L
Y
K
F
Y
D
G
------
R
K
H
---
A
F
E
-
L
L
-------------
A
S
R
V
A
A
E
V
F
R
E
S
G
A
R
Y
K
E
G
W
L
SRSS
G
D
---------------------
G
-
G
V
-
D
-----
F
I
G
R
I
----
D
MGSLK
A
S
T
P
V
V
V
L
G
-
Q
A
K
-----------
C
I
Q
P
T
S
S
--
V
--
S
P
E
Q
V
A
R
V
V
A
R
L
R
--
R
------
G
W
I
G
V
-
Y
V
T
T
G
S
F
S
R
Q
A
Q
V
E
-----------
I
I
----------
D
D
Q
Y
-
P
-----
V
---
V
L
-
I
A
G
G
T
----
L
A
------------
A
T
V
R
R
M
V
------
Q
A
N
Y
G
G
--
D
L
D
A
L
L
A
S
T
V
D
E
Y
G
A
A
V
T
H
R
-
R
P
E
E
V
I
SL------
4
PsiBlast_PDB
64.13
23%
-34
- C6 -
3J80
-
?
E:
[61-239]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
K
A
I
-----
L
M
Q
R
H
V
K
V
D
G
K
V
-
R
-
T
DTT
F
P
A
G
F
M
D
----------
V
I
------
T
L
E
A
T
N
E
N
F
---
R
L
V
Y
D
V
K
G
---
R
F
A
---
V
-
H
-----
R
----
I
T
D
E
E
A
-------
S
Y
K
L
-----
A
K
V
---------
K
K
-------------------------
V
--
Q
L
G
K
K
G
I
P
Y
V
V
--
T
H
D
G
R
T
I
R
Y
P
DPNI
K
V
--
N
--
D
T
V
K
V
D
L
----------
A
T
G
T
I
---
T
D
F
I
K
F
D
T
G
---------
K
L
V
Y
V
-
T
G
------
G
R
N
---
L
---
G
R
-------------
V
G
T
I
V
H
R
E
R
H
E
G
G
F
-----------
D
L
---------------------
V
-
H
I
----------
K
D
----
S
------
L
E
N
T
F
V
T
R
-
L
N
N
-----------
V
F
V
I
G
E
P
--
G
--
R
P
W
I
S
L
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------
40
Fugue
60.23
20%
-26
- C5 -
3WZM
1
?
A:
[15-278]
-----------------
M
R
T
R
S
---
T
I
S
T
P
N
------------------------------------------------------------------------
G
---------
I
T
W
Y
Y
E
---------------
Q
E
G
T
G
-
P
--
D
-
V
V
L
V
P
-------------
D
G
L
G
----------------------
E
C
Q
-
M
F
D
S
S
V
S
-----
Q
I
-
A
A
Q
G
-----
F
R
V
T
T
F
D
M
P
G
M
S
-
R
-
S
---
A
K
A
P
P
E
T
----------
Y
T
---------
E
V
T
A
Q
K
---
L
A
S
Y
-------
V
I
S
---
V
-
L
-----
D
----
A
L
D
I
K
H
----------------
A
T
V
---------
W
G
-------------------------
C
--
A
S
G
A
S
T
V
V
A
L
L
--
L
G
Y
P
D
R
I
R
N
A
----
M
C
--
H
--
E
L
P
T
-------------
K
L
L
D
H
---
L
S
N
T
A
V
L
E
D
E
E
-----
I
S
K
I
L
A
N
-
V
M
------
L
N
D
---
V
S
G
-
G
-------------------------------------------------------------------
S
-----
E
A
W
Q
A
----
M
------
G
D
E
V
H
A
R
L
-
H
-
K
-----------
N
Y
P
V
W
A
R
--
G
--
Y
P
R
T
I
P
P
S
A
P
V
K
---
D
------
L
E
A
L
R
-
G
K
P
L
---------
D
-----------
W
T
----------
V
G
A
A
T
P
-----
T
---
E
S
-
F
--
F
D
----
N
I
------------
V
T
A
T
K
A
G
------
V
N
I
G
L
L
--
P
G
M
H
F
P
Y
V
S
H
P
D
V
F
A
K
Y
V
V
E
-
T
T
Q
K
H
L
--------
8
PsiBlast_PDB
52.45
23%
-27
- C6 -
1B9O
1
LALBA_HUMAN
A:
[6-98]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
E
-----
L
S
Q
L
L
K
D
I
D
G
Y
G
-
G
I
A
---
L
P
E
L
I
C
T
----------
M
F
------
H
T
S
G
Y
D
T
Q
A
---
I
V
E
N
D
E
S
T
---
E
Y
G
---
L
-
F
-----
Q
----
I
S
N
K
L
W
------------------------------------------------------------------------
C
K
S
S
Q
V
P
Q
S
--------
R
--
N
I
C
D
I
S
------------
C
D
K
F
---
L
D
D
D
I
T
D
D
I
M
C
-----
A
K
K
I
L
D
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
51.55
23%
-11
- C6 -
1HML
3
LALBA_HUMAN
A:
[20-117]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
Q
FT
K
C
E
L
S
Q
L
L
K
D
I
D
G
Y
G
G
I
-
A
---
L
P
E
L
I
C
T
----------
M
F
------
H
T
S
G
Y
D
T
Q
A
---
I
V
E
N
N
E
S
T
---
E
Y
G
---
L
-
F
-----
Q
----
I
S
N
K
L
W
------------------------------------------------------------------------
C
K
S
S
Q
V
P
Q
S
--------
R
--
N
I
C
D
I
S
C
----------
D
--
K
F
---
L
D
D
D
I
T
D
D
I
M
C
-----
A
K
K
I
L
D
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
47.26
37%
-5
- C6 -
1IZ6
-
IF5A_PYRHO
A:
[76-121]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
--
Q
V
I
A
I
T
P
D
T
V
Q
I
M
--
D
------
M
E
T
Y
E
-
T
F
E
V
---------
P
IDTGVADEIRD
Q
L
----------
K
E
G
I
-
N
-----
V
---
E
Y
--------------------------------------------------------------------------------
20
PsiBlast_PDB
45.34
27%
53
- C7 -
1RS0
2
CFAB_HUMAN
A:
[271-340]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
---------------------
V
-
S
V
-
G
-----
G
E
K
R
D
----
L
------
E
I
E
V
V
L
F
H
-
P
N
Y
-----------
N
I
----
N
--
G
--
K
K
E
A
G
I
P
E
F
Y
-----
D
------
Y
D
V
A
L
-
I
K
L
K
---------
N
-----------
K
L
----------
K
Y
G
Q
-
T
-----
I
---
R
P
-
I
--
C
L
----
P
C
--------------------------------------------------------------------
10
PsiBlast_PDB
45.31
27%
48
- C7 -
2OK5
2
CFAB_HUMAN
A:
[523-584]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
---------------------
V
-
S
V
-
G
-----
G
E
K
R
D
----
L
------
E
I
E
V
V
L
F
H
-
P
N
Y
-----------
N
I
----
N
--
G
--
K
K
E
A
G
I
P
E
F
Y
-----
D
------
Y
D
V
A
L
-
I
K
L
K
---------
N
-----------
K
L
----------
K
Y
G
Q
-
T
-----
I
---
R
P
-
I
--
C
L
----
P
C
--------------------------------------------------------------------
19
PsiBlast_PDB
45.15
27%
50
- C7 -
1RRK
2
CFAB_HUMAN
A:
[271-340]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
---------------------
V
-
S
V
-
G
-----
G
E
K
R
D
----
L
------
E
I
E
V
V
L
F
H
-
P
N
Y
-----------
N
I
----
N
--
G
--
K
K
E
A
G
I
P
E
F
Y
-----
D
------
Y
D
V
A
L
-
I
K
L
K
---------
N
-----------
K
L
----------
K
Y
G
Q
-
T
-----
I
---
R
P
-
I
--
C
L
----
P
C
--------------------------------------------------------------------
9
PsiBlast_PDB
44.67
33%
72
- C6 -
2BH8
-
CSPA_ECOLI (first)
A:
[18-61]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-------------
M
T
G
I
V
K
W
F
N
A
D
K
G
F
-----------
G
F
---------------------
I
-
T
P
-
D
---------
D
----
G
------
S
K
D
V
F
V
H
F
-
S
A
G
-----------
S
S
G
A
A
V
R
--
G
--
N
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
44.24
35%
51
- C6 -
3C75
-
DHMH_PARVE
H:
[208-267]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
G
K
T
-----
F
D
R
M
L
D
V
-
P
D
------
C
Y
H
---
I
F
P
-
A
S
-------------
P
T
V
F
Y
M
N
C
R
D
G
-
S
L
-----------
A
R
---------------------
V
-
D
F
A
D
-----
G
E
T
K
V
----
T
------
N
T
E
V
F
-
H
T
-
E
D
E
-----------
L
L
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
43.91
27%
49
- C7 -
1DLE
-
CFAB_HUMAN
A:
[65-134]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
---------------------
V
-
S
V
-
G
-----
G
E
K
R
D
----
L
------
E
I
E
V
V
L
F
H
-
P
N
Y
-----------
N
I
----
N
-------------
F
Y
-----
D
------
Y
D
V
A
L
-
I
K
L
K
---------
N
-----------
K
L
----------
K
Y
G
Q
-
T
-----
I
---
R
P
-
I
--
C
L
----
P
C
--------------------------------------------------------------------