@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0482: (2016-03-16 )
MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE

Atome Classification :

(20 SA) .........10........20........30.....--...40...---.....50........-60........70.-------.....-..80........90---------.......-.-----.100.......110-----........------120...--------.-----.------..130.......140...-.--------.-------------..150-------.--..--.--.....160.-..-...--.-170........180..-....-.190.......200---.---.--....-...210..--..--....220-........230.......240.......250.---..---.---...260......-.270.......280.....-..290.......300---...---...-----------.310.......320-.......330.......340.......350.--......360.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLY--RKRVKTFE---EMSNVPKETIELLTA-NFVMNTLEEQVVQ-------ESTDG-TTKYLFKLSDGNL----------IETVMMK-Q-----EYGLSVCVTTQV-G-----CNIGCTFC------ASGLLK--------K-----S------RDLTAGEIVEQIMNVQHY-L--------D-------------GRN---------L--EE--R--VSHVVVMGI-GE-PFD--N-Y-DNVMDFLRVINHDK-GLAI-GARHITVSTSGL-----A---P--RIID-FANE-DFQ--VN--LAISLH--APNNELRTSIMRINKTYSIEKLMEAIHYYVNK---TN---R---RITFEYIMLKGV-NDHKKEALELAALLGEHRH-LAYVNLIPYNPVDEH---IDY---ERS-----------TKEDVLAFYDTLKK-NGINCVIRREHGTDIDAACGQLRSKQIKRVG--VRERMKQKQAAAEE
2 PsiBlast_PDB 96.0634%-107 - C3 -4PL2 ? B:[1-358] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLAVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGDDID--------DVIDRTKRTLRKRM---------
12 PsiBlast_CBE 95.7934%-104 - C3 -4PL2 ? A:[1-358] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLAVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGDDID--------DVIDRTKRTLRKRM---------
1 PsiBlast_PDB 95.5034%-109 - C3 -3RF9 RLMN_ECOLI A:[17-374] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLCVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGDD----------DVIDRTKRTLRKRM---------
4 PsiBlast_PDB 95.3934% -96 - C3 -4PL1 ? B:[1-359] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLAVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGDDIDAA-GQLAGDVIDRTKRTLRKRMQ--------
13 PsiBlast_CBE 95.0734%-110 - C3 -4PL1 ? A:[1-332] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLAVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRG-----------------------------------
11 PsiBlast_CBE 95.0634%-108 - C3 -3RF9 RLMN_ECOLI B:[17-374] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLCVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGDD----------DVIDRTKRTLRKRM---------
28 Fugue 94.7334%-111 - C3 -3RFA RLMN_ECOLI A:[17-349] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLCVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------V--TG--QRPITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P--ALDK-LGDM--ID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SNANQG---RVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPFP-G---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGD----------------------------------
14 HHSearch 94.6935%-106 - C3 -3RFA RLMN_ECOLI A:[17-349] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVG-DQR----------VETVYIP-E-----DDRATLCVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAKVT-------G--QR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P--ALDK-LGDM-I-D--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQ---G---RVTIEYVMLDHV-NDGTEHAHQLAELLKD--T-PCKINLIPWNPFPG----APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGD----------------------------------
3 PsiBlast_PDB 94.3234%-107 - C3 -3RFA RLMN_ECOLI A:[17-349] --KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMY--HYCCDNFD---EMTDINKVLRGKLKE-VAEIRAPEVVEEQ-------RSSDG-TIKWAIAVGD-QR----------VETVYIP-E-----DDRATLCVSSQV-G-----CALECKFC------STAQQG--------F-----N------RNLRVSEIIGQVWRAAKI-V--------G-------------AAK---------VTGQR--P--ITNVVMMGM-GE-PLL--N-L-NNVVPAMEIMLDDF-GFGL-SKRRVTLSTSGV-----V---P---ALD-KLGD-MID--VA--LAISLH--APNDEIRDEIVPINKKYNIETFLAAVRRYLEK---SN---ANQGRVTIEYVMLDHV-NDGTEHAHQLAELLKDTP---CKINLIPWNPF-PG---APY---GRS-----------SNSRIDRFSKVLMS-YGFTTIVRKTRGD----------------------------------
29 Fugue 59.0518%-100 - C3 -3C8F PFLA_ECOLI A:[1-245] SVIGRIHS----------------------------------------------------------------------------------------------------------FESCGTV-D-----GPGIRFITFFQ--G-----CLMRCLYCHNR---DTWDTH--------G-----G------KEVTVEDLMKEVVTYRHF-M--------N-------------ASG--------------------GGVTASG--GE-AIL--Q-A-EFVRDWFRACK-KE-GI------HTCLDTNGF-----V---R--RYDP-VIDE-LLE--VT--DLVMLDLKQMNDEIHQNLVGVSN-----HRTLEFAKYLAN---KN---V---KVWIRYVVVPGW-SDDDDSAHRLGEFTRDMGN-VEKIELLPYHELGKH---KWV---AMGEEYKLDGVKPPKKETMERVKGILEQ-YGHKVMF----------------------------------------
17 HHSearch 52.0117% -95 - C3 -2Z2U - TYW1_METJA A:[49-289] ---------------------------------------------------------------------------------------------------------------------------------THRCIQCTPSVIW-----CQQN-------------------------SQIKEP------KWEEPEVVYEKILAMHKR-I--------IMGYAGVLDRVGEKKFK---------E--AL--E--PKHVAISLS-GE-PTL--Y---PYLDELIKIF-HKN-GF------TTFVVSNGI-----L---T--D--V-IEKI-E-P--TQ--LYISLD--AYDLDSY----GGK-KEYWESILNTLDILKE----KK-------RTCIRTTLIRGY-N---DDILKFVELYERAD--VHFIELKSYM--------------DML-----------QHDEILKLAKMLDENSSYKLI-----------------------------------------
16 HHSearch 50.4819% -74 - C3 -2YX0 - TYW1_PYRHO A:[11-304] -----------------------------------------KITVQ---ANPNMPKEVAELFRKQHYEIVGRH--SGV-------K-LCHWLKKSLTE--GRFC----------YKQKFYGIH-----SHRCLQMTPVLA-W-----CTHNCIFC------WRPMEN--------F-----LGTELPQPWDDPAFIVEESIKAQRKLL--------I-------------GYKPKVDKKKFEE--AW--N--PTHAAISLS-GE-PML--Y---PYMGDLVEEF-HKR-GF------TTFIVTNGT-----I---PE-RLEEMIKEDKL-P--TQ--LYVSIT--APDIETYNSVNIPMIPDGWERILRFLELMRD----LP---T---RTVVRLTLVKG---ENMHSPEKYAKLILKAR--PMFVEAKAYM-----NRLTIN---NMP-----------SHQDIREFAEALVK------------------------------------------------
5 PsiBlast_PDB 50.2218% -97 - C3 -3C8F PFLA_ECOLI A:[23-207] ---------------------------------------------------------------------------------------------------------------------------------------ITFFQ-G-----CLMRCLYCHNR---DTWDTH--------G-----G------KEVTVEDLMKEVVTYRHF-M--------N-------------ASG--------------------GGVTASG--GE-AIL--Q-A-EFVRDWFRACKKE--------GIHTCLDTNGF-----V---R--RYDP-VIDE-LLE--VTDLVMLDLK--QMNDEIHQNLVGV----SNHRTLEFAKYLANK----N---V---KVWIRYVVVPGW-SDDDDSAHRLGEFTRDMGN-VEKIELLPYHELGKH-------------------------------------------------------------------------------------
6 PsiBlast_PDB 49.5818% -95 - C3 -3CB8 PFLA_ECOLI A:[23-207] ---------------------------------------------------------------------------------------------------------------------------------------ITFFQ-G-----CLMRCLYCHNR---DTWDTH--------G-----G------KEVTVEDLMKEVVTYRHF-M--------N-------------ASG--------------------GGVTASG--GE-AIL--Q-A-EFVRDWFRACKKE--------GIHTCLDTNGF-----V---R--RYDP-VIDE-LLE--VTDLVMLDLK--QMNDEIHQNLVGV----SNHRTLEFAKYLANK----N---V---KVWIRYVVVPGW-SDDDDSAHRLGEFTRDMGN-VEKIELLPYHELGKH-------------------------------------------------------------------------------------
18 HHSearch 49.1318%-108 - C3 -1TV8 MOAA_STAA8 A:[13-200] ----------------------------------------------------------------------------------------------------------------------------------IRDLRLSVTD-R-----CNFRCDYC------MPKEVFGDDFVFLPK-----N------ELLTFDEMARIAKVYAE-----------------------------------------L--G--VKKIRITG--GE-PLM--R---RDLDVLIAKL-NQIDGI-----EDIGLTTNGL-----L---LKKHGQK-LYDA-G-L--RR--INVSLD--AIDDTLFQSINNR--NIKATTILEQIDYATS----IG---L---NVKVNVVIQKG---INDDQIIPMLEYFKDK---HIEIRFIEFMDVG---------------------------------------------------------------------------------------
21 HHSearch 48.3217%-105 - C3 -3T7V PYLB_METBF A:[61-266] -----------------------------------------------------------------------------------------------------------------------------------LNCFIYFST-Y-----CKNQCSFC------YYNCRN--------EIN---R------YRLTMEEIKETCKTLKG-----------------------------------------A--G--FHMVDLTM--GEDPYYYED-P-NRFVELVQIVKEEL-GL------PIMI-SPGL-----MD--NA-TLLK-AREK-G-A--NF--LALYQE--TYDTELYRKLRV---GQSFDGRVNARRFAKQ----QG---Y---CV--EDGILTGV-GNDIESTILSLRGMSTND--PDMVRVMTFLPQEG----TPLEGFRDK-----------SNLSELKIISVLR-------------------------------------------------
31 Fugue 47.8818% -58 - C3 -2YX0 - TYW1_PYRHO A:[11-342] --KITV---------------QANPNMPKEVAELFR--KQHYEIVG---RHSGVK-------LC-HWLKKSLTEG----------------------------------------RFCYKQ-K-----FYGIHSHRCLQM-TPVLAWCTHNCIFCWRPMENFLGTEL--------P-----Q------PWDDPAFIVEESIKAQRK-LLIGYKPKVD-------------KKK---------F--EEAWN--PTHAAISLS-GE-PML----Y-PYMGDLVEEFHKRG-F-------TTFIVTNGT-----I---P--ERLE-EMIK-EDKLPTQ--LYVSIT--APDIETYNSVNIPMIPDGWERILRFLELM-RD---LP---T---RTVVRLTLVKGE-NM--HSPEKYAKLILKAR-----PMFVEAKAYMNR---LTI---NNMP----------SHQDIREFAEALVK-HLPGYHIEDEYEPS-RVVLIMRDDVDPQGTG--VEGRFIKH------
22 HHSearch 46.3613%-101 - C3 -1R30 BIOB_ECOLI A:[72-275] -----------------------------------------------------------------------------------------------------------------------------------------KTG-A-----CPEDCKYC------PQSSRY--------KTGLEAE------RLMEVEQVLESARKAKA-----------------------------------------A--G--STRFCMGAAWKN-PHE--RDM-PYLEQMVQGV-KAM-GL------EACM-TLGT-----L---SESQAQR-LANA-G-L--DY--YNHNLD--T-SPEFYGNIIT---TRTYQERLDTLEKVRD----AG---I---KVCS--GGIVGL-GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPL-ADN---DDV-----------DAFDFIRTIAVARI------------------------------------------------
15 HHSearch 40.0816% -59 - C3 -2A5H KAMA_CLOSU A:[10-317] -----------------------KDVSDADWNDWRWQVRNRIETVEELKKYIPLTKEEEEGVAQ-CVKSLRMAITPYYLSLIDPNDPNDP-VRKQAIPTALELNKAAADLEDPLHEDTDSP-VPGLTHRYPDRVLLLITD-M-----CSMYCRHC------TRRRFAGQ------S-----D------DSMPMERIDKAIDYIRNT----------------------------------------P--Q--VRDVLLSG--GD-ALL--V-SDETLEYIIAKL-REI-P-HV-EIVRIGSRTPVVLPQRIT---PE-LVNM-LKKY-H-P--VW--LNTHFN--HPNEI-------------TEESTRACQLLAD----AG---V---PLGNQSVLLRGV-NDCVHVMKELVNKLVKIR--VRPYYIYQCDLSLG----LEH---FRT-----------PVSKGIEIIEGLRG------------------------------------------------
23 HHSearch 38.8813%-100 - C3 -1OLT HEMN_ECOLI A:[52-247] ----------------------------------------------------------------------------------------------------------------------------------PLSLYVHIP--F-----CHKLCYFC------GCNKIV--------T-----R------QQHKADQYLDALEQEIVH-R--------A-------------PLF---------A--GR--H--VSQLHWGG--GT-PTYL-N-K-AQISRLMKLL-REN--FQFNADAEISIEVDPR-----EIELD--VLDH-LRAE-G-F--NR--LSMGVQ--DFNKEVQRLVNR---EQDEEFIFALLNHARE----IG---F---T-STNIDLIYGLPKQTPESFAFTLKRVAELN--PDRLSVFNYAHLPT--------------------------------------------------------------------------------------