@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0516: (2016-03-16 )
LKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKADEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTIINAESAFTNATKAENKMWRIKSDPAHVAFLPASGVDAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNADAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
Atome Classification :
(20 SA)
--------------------------------------------.........10-----........20.......---------.30........40........50--........60.......---.70.------.......80........90.....------...100...-....110.......120.....------------..130------......--...140.......150.----------......160.......170.......--------180..---------------.....190---........200----....--...--210.......--.-.220...-....-230.--..--------.....240....--...250.......260--..------..----.--.--.270..----.....-280--.------------.---------------.---------------....-----290---.----.--.----......300---.-------.......------.------310--------.-----.-......-.320---.-..--.....330.......340..------.---.-------..---.--350.......360--........-------370--...-.-..--.------------380.-.---------..-...390--.----...----...400.........410.-......-420...-.--...430.--......440.......450.......460.......470....-------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------------------------------------LK
K
L
T
Y
V
I
I
T
G
-----
L
V
L
V
F
I
AG
A
F
W
I
TNSTN---------QSDQKATQTEPIKKISPAN
V
K
T
I
--
S
S
E
A
K
K
T
L
N
S
L
A
SSGAD---KA
S
I
------
S
D
L
K
Q
L
I
K
E
L
KSYPTEKNDSG
V
Y
L
------
Q
N
L
T
A
C
L
E
A
-
V
K
S
YTTGKAD
E
K
T
L
G
K
V
Y
P
A
F
L
------------A
S
E
--------
Q
K
L
S
A
I
--EKTNQY
D
W
F
Y
A
AAATNQ----------QGLKEK
G
V
V
T
L
T
M
VGDNSFGTYPETP--------EHLKF---------------
D
N
V
FQKN----NGNN
T
Y
V
YKNC----LPWF--KSD--
D
--
Y
T
I
I
NAE--S-AFTNATK-AEN
K
-
M
W
-
R
--IK--------SDPA
H
V
A
F
LPAS--GV
D
A
A
NLANNHT
M
D
Y
F
--QV------G
Y
----
D
--
D
--
T
L
K
A
F
K
----ENN
I
P
-
V
FN--A------------D---------------A---------------
P
L
E
T
-----
T
-----
I
----
K
--
G
----
M
K
T
V
L
L
G-----Y-------DCRMSQQ------S------
P
----------
A
-----
Y
-
L
E
R
I
V
K
-
D
V
K
----
K
-YK--KED
T
L
V
I
V
N
M
HWG
V
E
YRETP------T---D-------
Y
Q
---
T
--
Q
F
G
H
A
I
L
DAGA
D
---
I
I
MGSH
P
H
-------
R
L
E
--
S
V
E
-
K
-YK--D------------
K
Y
I
V
-
Y
---------SM-GDFAFG--A----
D
P
T
----
L
L
S
R
--
M
T
S
M
F
Q
L
R
F
TKED-
N
K
I
V
L
K
-
D
I
S
I
V
P
-
T
--YENSDGS--TTENNYQPLPVFGD
D
A
K
K
I
V
D
E
L
N
R
ISKPIEGGVT
E
Y
TYFDPF-------------------------------------------------------------------------
36
Fugue
72.88
20%
12
- C3 -
4J3R
9
?
A:
[4-383]
-----------------------------------------------------------------------------------------------
A
T
L
P
T
T
A
S
S
S
T
A
V
A
--
S
S
Q
L
D
Q
L
A
N
F
A
Y
N
V
T
T
D
---
S
V
A
G
------
C
T
L
Q
N
L
R
V
R
R
D
W
R
A
F
S
K
T
Q
K
K
D
Y
I
------
N
S
V
-
L
C
L
Q
K
-
L
P
S
R
T
P
A
H
L
-
A
P
G
A
R
T
R
Y
D
D
F
V
------------
A
T
H
--------
I
N
Q
T
Q
I
IH
Y
T
G
T
F
L
A
W
H
R
Y
F
I
Y
E
F
E
----------
Q
A
L
R
D
E
C
----
S
Y
T
G
D
Y
P
Y
W
N
W
G
A
D
A
--------
D
N
M
E
K
---------------
S
Q
V
F
D
G
S
ETSM
S
G
N
G
E
Y
I
P
N
Q
G
----
D
I
K
L
--
L
L
G
--
N
--
Y
P
A
I
D
L
P
PG
S
-
G
G
G
C
V
T
S
-
G
P
F
K
-
D
Y
-
K
--
L
N
--------
L
G
P
A
A
L
S
-
L
P
G
G
--
N
M
T
A
A
--
A
N
P
L
T
Y
N
P
R
--
C
M
------
K
R
----
S
--
L
--
T
T
E
I
L
Q
----
R
Y
N
------------------------------------------------------------------------------------------------------------------------------------------
T
-
F
P
K
I
V
E
-
L
I
L
----
D
-
S
----
D
D
I
W
D
F
Q
M
T
M
Q
G
V
P
G
S
G
S
I
------
G
-------------------------
V
H
G
G
G
H
---
Y
S
M
G
G
D
P
G
-------
R
--------------
D
------------
V
Y
V
------------
S
P
-
G
D
T
A
F
W
--
L
----
H
H
G
----
M
I
D
R
--
V
W
W
I
W
Q
N
L
D
L
R
K
R
-
Q
N
-----
A
I
S
G
T
G
-
T
--
F
M
N
N
P
A
S
PN
T
T
L
D
T
V
I
D
L
G
Y
A
N
G
G
P
I
A
M
R
D
L
M
S
T
T
A
G
P
F
C
-----
Y
V
Y
L
----------------------------------------------------------------------------
18
HHSearch
60.43
16%
-28
- C5 -
3IVE
5
?
A:
[4-250]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
K
D
V
T
I
I
Y
T
N
D
L
H
A
H
V
E
P
Y
K
V
--------
P
---------------------
W
I
A
D
-----
G
K
R
D
I
G
G
W
A
N
I
----
T
T
L
V
--
K
Q
E
--
K
----
A
K
N
K
A
--
T
-
W
F
F
D
A
G
D
Y
F
T
G
P
-
Y
I
S
S
--
L
T
--------
K
G
K
A
I
I
D
I
M
N
T
M
--
P
F
D
A
V
T
I
G
-
N
H
E
F
D
H
G
--
W
D
------
N
T
----
L
--
L
--
Q
L
S
-------
Q
A
K
F
P
-
I
V
Q
--
G
------------
N
IFYQNSSKSFWDK--
P
---------------
Y
T
I
I
-----
E
-----
K
----
D
--
G
----
V
K
I
G
V
I
G
-----
L
-------
H
G
V
F
A
F
N
D
TVSAA
T
RVG
I
E
A
R
----------
D
-----
E
-
I
K
W
L
Q
R
-
Y
I
D
----
E
-
L
K
--
G
K
V
D
L
T
V
A
L
I
H
E
G
V
P
A
R
Q
S
S
------
M
----D
V
R
R
A
L
D
K
D
---
I
--
Q
T
A
S
Q
--
V
K
G
L
D
---
I
L
I
T
G
H
A
H
-------
V
G
T
--
P
E
P
-
I
K
V
G
--
N
------------
T
L
I
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
58.97
15%
-18
* C2 *
3S99
16
PBP_BRUA2
A:
[26-355]
--------------------------------------------
K
L
K
V
G
F
I
Y
I
G
P
-----------
P
G
D
F
G
W
T
Y
Q
H
D
---------
Q
A
R
K
E
L
V
E
A
L
G
-
D
K
V
E
T
T
F
L
E
N
V
AE
G
A
D
A
E
R
S
I
K
R
I
A
R
A
G
N
K
L
I
F
T
T
S
F
------
G
Y
M
D
P
T
V
K
V
A
K
K
F
P
------
D
V
K
F
------
E
H
A
T
------------
G
Y
K
T
A
D
N
M
S
A
Y
N
A
-----------------------------------
R
F
Y
E
G
R
Y
V
Q
G
V
I
A
A
K
M
----------
S
K
K
G
I
A
G
Y
I
G
S
V
P
V
--------------------------------------------------------------------------------
P
E
V
V
Q
G
I
--
N
-
S
F
M
L
G
A
Q
-
S
V
N
P
-
D
F
-
R
--
V
K
--------
V
I
W
V
N
S
W
F
D
P
G
K
--
E
A
D
A
A
K
A
L
I
D
Q
G
V
D
I
I
--
T
Q
------
H
T
----
D
ST
A
--
A
I
Q
V
A
H
----
D
R
G
-----------------------------------------------------------------------------------
I
K
A
F
G
-----
Q
-------
A
S
D
M
I
K
F
------
A
------
P
---------------------------------------
D
T
Q
L
T
A
V
V
D
E
W
G
P
Y
Y
I
D
R
A
------
K
---
A
-------
V
L
---
D
---------------------------------------
G
-
T
-
W
K
--
S
------------
Q
N
I
W
-
W
---------
G
M
-
K
E
G
L
V
K
--
M
----
A
P
------
F
T
N
--
M
P
D
D
V
K
K
L
A
E
E
T
E
-
A
R
I
K
S
G
-
E
L
N
P
F
T
G
P
--
I
K
K
Q
D
G
S
--
E
W
L
K
A
G
E
K
A
D
------
D
Q
T
L
L
G
M
N
F
Y
V
A
G
V
D
D
K
L
P
---------------------------------------------------------------------------------
19
HHSearch
58.79
18%
-42
- C5 -
2Z1A
4
?
A:
[28-245]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
T
L
T
L
V
H
T
N
D
T
H
A
H
L
E
P
V
E
L
--------
T
----------------------
L
S
G
-----
E
K
T
P
V
G
G
V
A
R
R
----
V
A
L
F
--
D
R
V
--
W
--
A
--
R
A
K
N
--
P
-
L
F
L
D
A
G
D
V
F
Q
G
T
-
L
Y
F
N
--
Q
Y
--------
R
G
L
A
D
R
Y
F
M
H
R
L
--
R
Y
R
A
M
A
L
G
-
N
H
E
F
D
L
G
--
P
G
------
P
L
----
A
--
D
--
F
L
K
-------
G
A
R
F
K
-
V
V
S
--
A
------------
N
VDASREPRLKGLFA-
P
---------------
Y
A
V
V
-----
V
-----
V
----
G
--
G
----
E
R
V
G
I
I
G
-----
L
-------
T
T
P
D
T
R
E
------
I
SN----
P
GPT
V
A
F
L
---
D
-----
P
-
Y
E
S
A
Q
K
-
A
V
Y
----
E
-
L
L
A
-
K
G
V
N
K
I
V
V
L
S
H
L
G
Y
G
E
D
--------------------------
L
--
K
L
A
R
R
L
--
V
G
V
Q
---
V
I
V
G
G
H
S
H
-------
T
L
L
--
G
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
57.75
12%
-21
- C2 -
1W25
4
PLED_CAUCN
A:
[1-454]
-----------------------------------------------------
S
A
-----
R
I
L
V
V
-----------
D
---------
D
I
E
A
N
V
R
L
L
E
A
K
L
T
A
E
Y
Y
E
V
S
T
A
--
M
D
-
G
P
T
A
L
A
M
A
A
R
D
L
P
D
---
I
I
L
L
D
VMMPG
M
D
G
F
T
V
C
R
K
L
K
D
D
P
T
T
R
H
I
P
V
V
L
I
T
A
LDG
R
G
D
R
I
Q
G
L
E
S
G
A
S
D
F
L
T
K
P
I
D
D
V
M
L
F
A
R
V
R
S
L
T
------------
R
F
K
--------
L
V
I
D
E
L
--
R
Q
R
E
A
S
G
--
R
R
M
G
V
I
A
G
----------
A
A
A
R
L
D
G
L
G
G
R
V
L
I
V
D
D
N
E
R
Q
A
Q
R
V
A
--------
A
E
L
G
V
---------------
E
H
R
P
V
I
E
----
S
D
P
E
K
A
K
I
S
A
G
----
G
P
V
--------
D
--
L
V
I
V
N
A
A
--
A
-
K
N
F
D
G
L
R
-
F
T
A
A
-
L
R
-
S
--
E
E
--------
R
T
R
Q
L
P
V
L
A
M
V
D
--
P
D
D
R
G
R
M
V
K
A
L
E
I
G
V
N
--
D
I
------
L
S
R
PID
P
--
Q
--
E
L
S
A
R
V
----
K
T
Q
I
Q
-
R
K
R
--
Y
------------
T
---------------
D
---------------
Y
L
R
N
NLD--
H
-----
S
----
L
--
E
----
L
A
V
T
D
Q
L
-----
T
-------
G
L
H
N
R
R
Y
------
M
------
T
----------
G
-----
Q
-
L
D
S
L
V
K
-
R
A
T
----
L
-
G
G
--
D
P
V
S
A
L
L
I
D
I
D
F
---
F
K
K
I
N
------
D
---
T
-------
F
G
---
H
--
D
I
G
D
E
V
L
R
E
F
A
L
---
R
L
A
S
N
V
R
A
-------
I
D
L
--
P
C
R
-
Y
-
G
G
--
E
------------
E
F
V
V
-
I
---------
M
P
-
D
T
A
L
A
D
--
A
----
L
R
I
----
A
E
R
I
--
R
M
H
V
S
G
S
P
F
T
V
A
H
-
G
R
E
M
L
N
V
T
I
S
I
G
V
-
S
--
A
T
A
G
E
G
D
--
T
P
E
A
L
L
K
R
A
D
E
G
V
Y
Q
A
K
A
-------------
S
G
R
N
A
V
V
G
K
A
A
H
-------------------------------------------------------------------------
23
HHSearch
56.09
14%
-36
- C5 -
3AV0
3
MRE11_METJA
A:
[18-229]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
H
M
M
F
V
H
I
A
D
N
H
L
G
Y
R
Q
Y
N
L
--------
D
-----------------------
D
R
-----
E
K
D
I
Y
D
S
F
K
L
C
----
I
K
K
I
L
E
I
K
P
--
D
--
V
V
L
H
S
----
G
-
D
L
F
N
D
L
R
--
P
-
P
-
V
K
-
A
--
L
R
--------
I
A
M
Q
A
F
K
K
L
H
E
N
--
N
I
K
V
Y
I
V
A
G
N
H
E
M
P
R
R
--
L
G
------
E
E
-------
S
--
P
L
A
L
L
K
-----
D
Y
V
K
-
I
L
D
--
G
--------------------------------------------
K
D
V
I
-----
N
-----
V
----
N
--
G
----
E
E
I
F
I
C
G
-----
T
-------
Y
Y
H
K
K
S
K
------
R
------
E
----------
E
-----
M
-
L
D
K
L
K
N
-
F
E
S
----
E
--
A
--
K
N
Y
K
K
K
I
L
M
L
H
Q
G
I
N
P
Y
-
I
P
------
L
---
D
-------
Y
E
---
L
-----
E
H
F
D
L
P
K
F
S
---
Y
Y
A
L
G
H
I
H
-------
K
R
I
--
L
E
R
---
F
N
--
D
------------
G
I
L
A
-
Y
---------
S
--
G
S
T
E
I
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
Fugue
55.88
17%
-18
- C1 -
4XFV
-
ELP2_YEAST
A:
[7-790]
E
C
I
T
P
E
A
I
F
I
G
A
N
KQTQV
S
D
I
H
KVKK
I
V
A
F
G
A
GK
T
I
A
L
W
D
PIEP
N
N
K
G
V
Y
A
T
L
K
G
HEAEV
T
C
V
R
F
V
P
D
S
D
F
M
V
S
A
S
E
DH
H
V
K
I
W
K
F
T
D
Y
S
H
L
Q
C
I
Q
T
I
Q
H
Y
S
K
-
T
I
V
A
L
--
S
A
-----
L
P
S
L
I
S
V
G
C
A
---
D
G
T
I
------
S
I
W
R
Q
N
I
Q
N
-
D
E
F
G
L
A
H
E
F
T
I
K
F
F
------
Y
P
L
C
L
S
L
S
K
-
V
E
E
K
K
Y
L
L
A
I
G
G
T
N
V
N
V
F
I
A
S
F
I
L
S
DSGIEKCRV
V
A
E
L
E
GHEDWV
K
S
L
A
F
R
--
H
Q
E
T
P
G
D
Y
L
L
C
S
G
S
Q
D
R
Y
I
R
L
W
R
I
R
I
N
D
L
I
L
S
N
K
Q
Y
K
F
Q
I
D
D
E
L
R
V
G
I
N
F
E
A
L
IMGHD
D
W
I
S
S
L
Q
W
H
ESRL
Q
L
L
A
A
T
ADT
S
L
M
V
W
E
P
D
----
S
G
I
W
V
C
S
L
R
L
G
EFW
S
C
L
W
F
--
T
H
E
R
M
D
--
F
F
L
T
N
G
K
--
T
G
S
W
R
M
W
A
T
-
C
D
Q
R
-
L
G
-
I
S
G
A
T
--------
K
D
V
T
D
I
A
W
S
P
-
S
--
G
E
Y
L
L
A
T
S
L
D
Q
T
T
R
L
F
--
A
P
W
IYDAS
G
R
----
K
--
R
--
E
I
A
T
W
H
----
E
F
S
R
P
Q
I
H
G
--
Y
------------
D
---------------
M
---------------
I
C
V
E
-----
T
-----
V
----
T
--
D
----
T
R
F
V
S
G
G
DEK
I
L
R
-------
S
F
D
L
P
K
G
------
V
------
A
----------
G
-----
M
-
L
Q
K
F
V
G
---
I
----
Q
-
F
E
--
E
E
C
P
P
M
E
D
Q
L
Q
R
H
L
L
W
P
E
V
E
------
K
---
L
-------
Y
G
---
H
--
G
F
E
I
T
C
L
D
I
S
P
D
QK
L
I
A
S
A
C
R
S
N
NVQNA
V
I
R
I
F
--
S
T
E
-
N
-
W
L
--
E
IKP
A
L
P
F
H
SLTI
T
R
L
K
-
F
---------
S
K
D
G
K
F
L
L
S
--
V
C
RDR
K
W
A
----
L
W
E
R
NM
E
D
N
T
F
E
L
R
F
K
N
E
K
P
H
T
R
I
I
W
-
D
A
D
W
A
P
-
L
---
E
F
G
N
V
F
--
V
T
A
S
R
D
K
T
V
K
V
W
R
H
Q
K
E
P
A
D
D
Y
V
L
E
A
S
I
K
H
T
K
A
V
T
A
I
S
I
H
D
S
M
IRE
K
I
L
I
S
V
G
L
ENG
E
I
Y
L
Y
S
Y
T
LG
K
F
E
L
ITQLNEDITPADKIT
R
L
R
W
S
HLKRNG
K
L
F
L
G
V
G
S
SDL
S
T
R
I
Y
S
L
A
13
HHSearch
55.18
17%
-37
- C5 -
2Z06
3
?
A:
[1-194]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
V
L
F
I
G
D
V
M
A
E
P
G
L
R
A
-------------------------------------------
V
G
L
H
L
P
D
I
----
R
-----
D
R
Y
--
D
--
L
V
I
A
N
G
E
--
N
-
A
A
R
G
K
G
-----------------------
L
D
R
R
S
Y
R
L
L
R
E
A
--
G
V
D
L
V
S
L
G
-
N
H
A
W
D
H
K
--
E
V
Y
-----
A
L
----
L
--
E
--
S
E
P
V
V
R
----
P
L
N
Y
P
-
P
G
T
--
P
------------
G
K--------------
G
---------------
F
W
R
L
-----
E
-----
V
----
G
--
G
----
E
S
L
L
F
V
Q
-----
V
-------
M
G
R
I
F
M
D
------
P
------
L
----------
D
-----
D
P
F
R
A
L
D
--
R
L
L
----
E
--
E
--
E
K
A
D
Y
V
L
V
E
V
H
A
E
A
T
---------------
S
-------
E
K
---
M
--
A
L
A
H
Y
-
L
D
G
R
A
S
---
A
V
L
G
T
H
T
H
-------
V
P
T
LD
A
T
R
-
L
-
P
K
--
G
------------
T
L
Y
Q
-
T
---------
D
V
-
G
M
T
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
55.02
16%
-34
- C5 -
1T71
2
Y349_MYCPN
A:
[2-267]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
S
I
K
F
I
F
L
G
D
V
Y
G
K
A
G
R
N
-------------------------------------------
I
I
K
N
N
L
A
Q
L
----
K
S
K
Y
---
Q
A
--
D
--
L
V
I
V
N
A
E
--
N
-
T
T
H
G
K
G
-----------------------
L
S
L
K
H
Y
E
F
L
K
E
A
--
G
V
N
Y
I
T
M
G
-
N
H
T
W
F
Q
K
LD
L
A
------
V
V
----
I
--
N
--
K
K
D
L
V
R
----
P
L
N
L
D
-
T
S
F
--
A
------------
F
HNLGQ----------
G
---------------
S
L
V
F
-----
E
-----
F
----
N
--
K
----
A
K
I
R
I
T
N
-----
L
-------
L
G
T
S
V
P
L
------
P
F
K
T
---
T
----------
N
-----
P
-
F
K
V
L
K
E
-
L
I
L
----
K
-
R
----
D
C
D
L
H
I
V
D
F
H
A
E
T
T
S
E
----------------------
K
---
N
--
A
F
C
M
A
-
F
D
G
Y
V
T
---
T
I
F
G
T
H
T
H
-------
V
P
S
--
A
D
L
-
R
-
I
T
--
P
KG
S
A
Y
I
TDVGM-
C
G
P
G
F
G
SVIGAN
P
E
Q
S
I
-
R
L
F
C
A
G
SR
E
----
H
F
E
V
S
KC
G
A
Q
L
--
N
G
V
F
F
E
V
D
V
N
--
T
-
K
K
-----
V
I
K
T
E
A
-
I
--
R
I
V
E
-------------------------------------------------------------------------------------------------------------------------
17
HHSearch
54.05
14%
-42
- C5 -
1HP1
4
USHA_ECOLI
A:
[71-234]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
A
E
P
D
F
R
G
M
N
L
V
--
G
Y
D
A
M
A
I
G
-
N
H
E
F
D
N
P
--
L
T
------
V
L
----
R
--
Q
--
Q
E
K
W
-------
A
K
F
P
-
L
L
S
--
A
------------
N
IYQKSTGERLFK---
P
---------------
W
A
L
F
-----
K
-----
R
----
Q
--
D
----
L
K
I
A
V
I
G
-----
L
-------
T
T
D
D
T
A
K
------
I
GN----
P
EYFTD
I
E
F
R
-
K
-----
P
-
A
D
E
A
K
L
-
V
I
Q
----
E
-
L
Q
Q
T
E
K
P
D
I
I
I
A
A
T
H
M
G
H
Y
D
N
G
E
H
------
G
SNA
P
-------
G
D
---
V
--
E
M
A
R
A
L
P
A
G
S
L
A
---
M
I
V
G
G
H
S
Q
-------
D
P
V
--
C
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
53.30
16%
-0
- C2 -
1F60
-
EF1A_YEAST
A:
[2-441]
------------------------------------------G
K
E
K
S
H
I
N
V
V
V
I
G
-----
H
V
------------------------
D
S
G
K
S
T
T
T
G
H
L
I
Y
K
C
G
G
I
D
K
R
T
I
--
E
K
F
E
K
E
A
A
E
L
----
G
K
G
---
S
F
K
Y
------
A
W
V
L
D
K
L
K
A
E
R
E
R
G
I
T
I
D
I
A
L
W
K
F
------
E
T
------------------
P
K
Y
Q
V
T
V
I
D
A
P
G
------------
H
R
D
--------
F
I
K
N
M
I
--
T
G
T
S
Q
A
D
C
A
I
L
I
I
A
G
G
V
----------
G
E
F
E
A
G
------------
I
S
K
D
G
Q
T
R
--------
E
H
A
L
L
---------------
A
F
T
L
----------
G
V
R
Q
L
I
V
A
----
V
N
K
M
--
D
S
V
--
K
--
W
D
----
E
--
S
-
R
F
Q
E
I
V
K
-
E
T
S
N
F
I
K
-
K
--
V
G
--------
Y
N
P
K
T
V
P
F
V
P
I
S
--
G
W
N
G
D
N
M
I
E
A
T
T
N
A
P
W
--
Y
K
------
G
W
----
E
--
K
--
E
T
K
A
G
V
----
V
K
G
K
T
-
L
L
E
--
A
------------
I
---------------
D
A
I
E
Q
P
S
R
PTDK
P
L
R
L
P
L
Q
D
-----
V
-----
Y
----
K
I
G
G
----
I
G
T
V
P
V
G
-----
R
VE
T
G
V
I
K
P
G
M
V
V
T
F
------
A
------
P
----------
A
-----
G
-
V
T
T
E
V
K
-
S
V
E
----
M
-
H
H
--
E
Q
L
E
Q
G
V
P
G
D
N
V
G
F
N
V
K
N
V
S
------
V
---
K
-------
E
-------------
I
R
R
G
-
N
---
V
C
G
D
A
K
N
D
-------
P
P
K
--
G
C
A
-
S
-
F
N
--
A
------------
T
V
I
V
-
L
---------
N
H
-
P
G
Q
I
S
A
--
G
----
Y
S
P
----
V
L
D
C
--
H
T
A
H
I
A
C
R
F
D
E
L
L
-
E
K
N
D
R
R
-
S
G
K
K
L
E
-
D
HP
K
F
L
K
S
G
D
--
A
A
L
V
K
F
V
P
S
K
P
M
C
V
E
A
F
S
E
Y
P
P
L
G
R
F
A
V
R
D
M
R
Q
T
V
A
V
G
V
I
K
S
V
DK-----------------------------------------------------------------------
34
Fugue
52.42
12%
-12
- C2 -
3C9H
2
?
A:
[16-354]
----------------------------------------------------------------------------------------------------
P
A
L
A
Q
V
A
V
F
--
P
A
L
S
G
Q
T
L
V
V
Y
S
S
--------
L
D
E
------
P
L
A
T
P
M
I
E
G
F
Q
K
A
-----
N
P
D
I
A
V
------
H
Y
E
D
M
L
T
G
E
-
I
Y
D
R
I
V
K
E
T
D
A
G
K
-------------------------------------------
K
T
A
D
F
A
F
S
S
A
M
D
L
Q
----------
V
K
L
S
N
D
G
Y
A
Q
-----
R
S
D
L
A
M
S
A
R
W
P
--------
A
W
A
N
W
---------------
R
N
T
A
Y
A
-----------------------
L
--
T
F
E
--
P
--
A
V
F
V
Y
H
K
--
P
-
S
F
T
T
E
K
-------------------------------
P
P
A
T
--
R
A
E
F
V
D
Y
L
E
R
H
A
K
E
V
---------------------------------
H
G
R
I
A
-
T
Y
D
--
I
------------
E
---------------------------------------------------
R
--
G
----
V
G
F
L
F
M
S
-----
R
-------
D
Q
E
Q
F
G
D
------
I
------
W
----------
S
-----
V
-
I
K
A
M
G
A
-
A
G
V
----
K
-
V
Y
--
S
T
S
S
A
I
L
E
R
V
S
D
G
--------------------------
R
---
F
--
V
L
G
Y
N
I
L
G
S
Y
A
A
---
D
W
A
S
R
H
P
----------
D
--
V
G
I
-
V
-
L
P
--
K
------------
D
Y
T
V
-
V
---------
M
S
-
R
I
G
L
V
P
--
E
----
A
A
A
----
N
P
E
L
--
G
R
R
Y
L
E
F
F
M
S
K
E
G
-
Q
T
I
M
A
R
-
Q
L
Q
I
P
A
-
V
--
S
P
E
V
A
G
E
--
N
T
A
N
T
M
Q
A
I
H
--
G
A
Q
L
R
P
V
--
P
V
S
P
G
L
M
V
Y
L
D
Q
V
K
R
S
R
L
I
E
R
W
N
E
A
L
R
S-------------------------------------------------------------------
16
HHSearch
52.15
13%
-30
- C5 -
3JYF
10
?
A:
[5-251]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
T
V
D
L
R
I
M
E
T
T
D
L
H
S
N
M
M
D
F
D
Y
-------------------------------
Y
K
D
-----
A
A
T
E
K
F
G
L
V
R
T
----
A
S
L
I
--
E
Q
A
--
R
--
A
--
E
V
K
N
--
S
-
V
L
V
D
N
G
D
V
I
Q
G
S
-
P
L
G
D
--
Y
M
A
A
K
GLKEG
D
V
H
P
V
Y
K
A
M
N
T
L
--
N
Y
A
V
G
N
L
G
-
N
H
E
F
N
Y
G
--
L
D
------
F
L
----
H
--
K
--
A
L
A
G
-------
A
K
F
P
-
Y
V
N
--
A
------------
N
IIDAKTGKPMFT---
P
---------------
Y
L
I
Q
D
T
R
V
V
D
-----
S
----
D
--
G
Q
I
H
T
L
R
I
G
Y
I
G
-----
F
-------
V
P
P
Q
I
M
T
------
W
D
-----
K
ANLNGK
V
T
V
N
D
-----
I
-
T
E
T
A
R
K
-
Y
I
P
----
E
-
M
R
A
-
K
G
A
D
V
V
V
V
V
A
H
S
G
L
S
A
D
P
Y
Q
------
A
MA-
E
-------
N
S
---
V
--
Y
Y
L
S
Q
--
V
P
G
V
D
---
A
I
M
F
G
H
A
H
-------
A
V
F
--
P
G
K
-
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
51.54
13%
-37
- C5 -
1T70
-
?
A:
[1-195]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
V
L
F
I
G
D
V
F
G
Q
P
G
R
R
V
-------------------------------------------
L
Q
N
H
L
P
T
I
----
R
-----
P
Q
F
--
D
--
F
V
I
V
N
M
E
--
N
-
S
A
G
G
F
G
-----------------------
M
H
R
D
A
A
R
G
A
L
E
A
--
G
A
G
C
L
T
L
G
-
N
H
A
W
H
H
K
D
-
I
Y
------
P
M
----
L
--
S
E
D
T
Y
P
I
V
R
----
P
L
N
Y
A
-
D
P
G
TP
G
------------
V
---------------
G
---------------
W
R
T
F
-----
D
-----
V
----
N
--
G
----
E
K
L
T
V
V
N
-----
L
-------
L
G
R
V
F
M
E
A-----
V
------
D
----------
N
-----
P
-
F
R
T
M
D
A
-
L
L
E
----
R
-
D
----
D
L
G
T
V
F
V
D
F
H
A
E
A
T
S
E
----------------------
K
---
E
--
A
M
G
W
-
H
L
A
G
R
V
A
---
A
V
I
G
T
H
T
H
-------
V
P
T
--
A
D
T
-
R
-
I
L
KG
G
------------
T
A
Y
Q
-
T
---------
D
A
-
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
49.79
11%
-16
- C5 -
3C9F
2
?
A:
[10-269]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
L
T
W
N
D
I
N
F
V
H
T
T
D
T
H
G
W
Y
S
G
H
I
N
--------
Q
-------------------
P
L
-
Y
H
A
N
----
W
G
D
F
I
S
F
T
T
H
M
----
R
R
I
A
--
H
S
---------
R
N
Q
D
--
L
-
L
L
I
D
S
G
D
R
H
D
G
N
-
G
L
-
S
D-
I
T
SP------
N
G
L
K
S
T
P
I
F
I
K
Q
--
D
Y
D
L
L
T
I
G
-
N
H
E
L
Y
L
W
--
E
N
------
S
K
----
Q
--
E
--
Y
E
T
V
V
N
----
H
F
Q
D
K
-
Y
V
C
--
S
------------
N
V
D
I
R
L
DNGLFVPLGL
K
---------------
Y
K
Y
F
T
T
---
P
-----
I
----
R
--
G
----
I
R
V
M
A
F
G
-----
F
-------
L
F
D
F
K
R
F
------
N
------
S
G
T
R
V
T
-----
P
-----
M
-
A
E
T
I
H
E
P
W
F
Q
----
E
A
L
K
--
H
E
V
D
L
I
I
I
V
G
H
T
P
I
S
H
N
W
G
E
------
F
---
Y
-------
Q
V
---
H
--
Q
Y
L
R
Q
F
F
P
D
T
I
I
---
Q
Y
F
G
G
H
S
H
-------
I
R
D
--
F
T
V
-
F
-
D
S
--
L
------------
S
T
G
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
49.77
19%
-28
- C5 -
3GVE
3
NTPES_BACSU
A:
[90-260]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
P
I
I
S
V
M
N
A
L
--
K
Y
D
A
G
T
L
G
-
N
H
E
F
N
Y
G
--
L
D
------
F
L
----
D
--
G
--
T
I
K
G
A
D
F
P
I
V
N
A
N
V
K
-
T
T
S
--
G
------------
E
NRYT-----------
P
---------------
Y
V
I
N
-----
E
K
TLID
E
NG
N
E
Q
--
K
----
V
K
V
G
Y
I
G
-----
F
-------
V
P
P
Q
I
M
T
------
W
D
-----
K
KNLEGQ
V
Q
V
Q
D
-----
I
-
V
E
S
A
N
E
-
T
I
P
----
K
-
M
K
A
-
E
G
A
D
V
I
I
A
L
A
H
T
G
I
E
K
Q
A
Q
S
------
S
---
G
-------
A
E
NA
V
F
--
D
L
A
T
K
--
T
K
G
I
D
---
A
I
I
S
G
H
Q
H
-------
G
L
F
--
P
S
A
-
E
-
Y
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
HHSearch
48.41
14%
-37
- C5 -
2WDC
10
?
A:
[79-303]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
T
P
L
A
Y
L
L
S
Y
V
D
F
V
E
L
A
R
T
F
-------------------------------------------
G
P
I
G
G
M
G
A
L
----
T
A
L
I
--
R
D
Q
--
K
A
R
V
E
A
E
G
G
K
--
A
-
L
V
L
D
G
G
D
T
W
T
N
S
-
G
L
S
L
--
L
T
--------
R
G
E
A
V
V
R
W
Q
N
L
V
--
G
V
D
H
M
V
-
S
-
H
W
E
W
T
L
G
--
R
E
------
R
V
----
E
--
E
--
L
L
G
L
-------
F
R
G
E
-
F
L
S
--
Y
NIVDDLFGDPLF
P
---------------
A
---------------
Y
R
I
H
-----
R
-----
V
----
G
--
P
----
Y
A
L
A
V
V
G
-----
A
-------
S
Y
P
Y
V
K
V
------
S
H-----
P
ESFTEGLSFA
L
-----
D
-
E
R
R
L
Q
E
-
A
V
D
----
K
-
A
R
A
-
E
G
A
N
A
V
V
L
L
S
H
N
G
M
Q
L
D
--------------------------
A
--
A
L
A
E
R
I
--
R
G
I
D
---
L
I
L
S
G
H
T
H
-------
D
L
T
--
P
R
P
W
R
-
V
G
--
K
------------
T
W
I
V
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
46.59
13%
-62
- C5 -
3THO
5
RAD50_THEMA
B:
[68-218]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
L
D
Y
L
K
R
M
M
R
T
A
P
V
V
V
L
P
G
N
Q
D
W
K
G
L
--
K
L
------
F
G
-------
N
--
F
V
T
S
I
-----
S
S
D
I
T
-
F
V
M
--
S
------------
F
---------------
E
---------------
P
V
D
V
-----
E
A
----
K
----
R
--
G
----
Q
K
V
R
I
L
P
-----
F
-------
P
Y
P
D
E
S
--------------------------K
N
E
G
D
F
-
R
F
F
L
E
S
-
R
L
N
K
L
Y
E
E
-
A
L
--
K
K
E
D
F
A
I
F
M
G
H
F
T
V
E
G
L
A
G
------------------------
R
EI
I
I
N
R
A
L
I
P
S
V
V
D
---
Y
A
A
L
G
H
I
H
-------
S
F
R
--
E
I
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
45.22
10%
0
- C3 -
1T3N
2
POLI_HUMAN
A:
[1-388]
--------------------------------------------
S
R
V
I
V
H
V
D
L
D
C
----------------
F
Y
A
Q
V
E
---------
M
I
S
N
P
E
L
K
D
K
P
L
G
V
Q
Q
K
Y
L
V
V
T
C
--
N
Y
E
A
R
K
L
G
V
K
K
L
M
N
V
R
D
---
A
K
E
K
------
C
P
--------
Q
L
V
L
V
N
G
E
D
L
T
R
Y
R
------
E
M
S
Y
K
V
T
E
L
-
L
E
E
F
S
-------------------------------------------
P
V
V
--
E
R
L
G
F
D
E
N
F
V
D
L
T
E
M
V
E
----------
K
R
L
Q
Q
L
------------------
Q
S
--------
D
E
L
S
A
---------------
V
T
V
S
G
H
V
----
Y
N
N
Q
S
I
---------------
N
L
L
--
D
--
V
L
H
I
R
L
L
--
V
-
G
S
Q
I
A
A
E
-
M
R
E
A
-
M
Y
-
N
--
Q
L
--------
G
L
T
G
C
A
G
V
A
S
-
N
--
K
L
L
A
K
L
V
S
G
V
F
K
P
N
Q
Q
--
T
V
------
L
L
----
P
--
E
--
S
C
Q
H
L
I
----
H
S
L
N
H
-
I
K
E
--
I
------------
P
---------------
G
---------------
I
G
Y
K
-----
T
-----
A
----
K
--
C
----
L
E
A
L
G
I
N
-----
S
-------
V
R
D
L
Q
T
F
------
S
------
P
----------
K
-----
I
-
L
E
K
E
L
G
--------------
I
S
V
A
Q
R
I
Q
K
L
S
F
G
E
D
N
S
P
V
I
------
L
---
S
-------
G
P
---
P
--
Q
S
---------------
F
S
E
E
D
S
-------
F
K
K
--
C
S
S
-
E
-
V
E
--
A
------------
K
N
K
I
-
E
---------
E
L
-
L
A
S
L
L
N
--
R
----
V
C
Q
----
D
G
R
K
--
P
H
T
V
R
L
I
I
R
R
Y
S
S
-
E
K
H
Y
G
R
-
E
S
R
Q
C
P
-
I
--
P
S
H
V
I
Q
K
--
L
G
T
G
N
Y
D
V
M
T
P
M
V
D
I
L
M
K
L
F
R
N
M
V
N
V
K
M
P
F
H
L
T
L
L
S
V
C
F
C
N
L
K
-------------------------------------------------------------------------
27
HHSearch
44.98
11%
-47
* C5 *
3IB7
7
CPDA_MYCTU
A:
[97-236]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
L
--
G
A
E
L
V
W
V
M
G
N
H
D
D
R
A
E
--
L
R
------
K
F
--------------
L
L
----
D
E
A
-
P
-
S
M
A
---------------
P
---------------
L
---------------
D
R
V
C
-----
M
-----
I
----
D
--
G
----
L
R
I
I
V
L
D
-----
T
-------
S
V
P
G
H
H
H
G
E
I
---
R
------
A
----------
S
-----
Q
-
L
G
W
L
A
E
-
E
L
A
----
T
-
P
----
A
P
D
G
T
I
L
A
L
H
H
P
P
I
P
S
V
L
D
MAVTVE
L
---
R
-------
D
Q
---
A
--
A
L
G
R
V
L
R
G
T
D
V
R
---
A
I
L
A
G
H
L
H
-------
Y
S
T
--
N
A
--
T
-
F
V
--
G
------------
I
P
V
S
-
V
---------
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------