@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0540: (2016-03-16 )
MNRRERRKHKRRKNMIIVLSTVFLMFIATSWMIYEFKSKQEQTVSAPTKKKAATATNPSENAATNEPEETKDPEPVEEKPKETIVKNQEIDNYLQKIGFSGSALVVRDGETIIQKGYMYANRDDKVLNTPDTLFYIGSSQKAIIATALLQLEEKGKINTNDPISKYIPDFPNGNKILVKNFMNHTSGIVGRPNLTSNMTPDQIVKAIEKRGIKSQPGKWDYMDANYTVVGYLVEKISGQPLATYLQENIFNPAGMKHTGYYQKDVDGGKNVSTGYKIDENGVFQSPKLADLTKLYGAGDISMSTTDMYLFDKALMDKKLISEASLKKMFTKGSKSTYGMGFYVDPGSYNSHGVVTGWDVSNSFSHTGRTYVILFSNVQNYIASFGKVNNDIYGFLNK

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.-......110.......120.......130.......140.......150.......160.......170.--.------.......180......-------------.190.-..----------------.-----------...200----------.........--210.--....-..220.......230.......240.......250.......260.......270.....-.-.-------------280..------------...-..290.-----......300.......310....--.--..320......---.330-------.--------......340-----...-------.-----...350..--..-...360.......370.......380.......390.....----------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNRRERRKHKRRKNMIIVLSTVFLMFIATSWMIYEFKSKQEQTVSAPTKKKAATATNPSENAATNEPEETKDPEPVEEKPKETIVKNQEIDNYLQKIGFSGSA-LVVRDGETIIQKGYMYANRDDKVLNTPDTLFYIGSSQKAIIATALLQLEEKGKINTNDPISKYIPDF--P--N------GNKILVKNFMNHTSGI-------------VGRPN-LT----------------S-----------NMTP------------DQIVKAIEK--RGIK--SQPG-KWDYMDANYTVVGYLVEKISGQPLATYLQENIFNPAGMKHTGYYQKDVDGGKNVSTGYKI-D-E-------------NGVFQ------------SPK-LADLTK-----LYGAGDISMSTTDMYLFDKALMD--K--KLISEASLKKM---FTKG-------S--------KSTYGMGFY-----VDP-------G-----SYNSHGVV--TG-WDVSNSFSHTGRTYVILFSNVQNYIASFGKVNNDIYGFLNK----------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 88.6328% -76 - C2 -1CEF DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 88.3628% -73 - C2 -1PW1 DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 88.2528% -74 - C2 -1YQS DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 88.0928% -72 - C2 -1PW8 DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 88.0528% -71 - C2 -1IKI DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 87.9928% -72 - C2 -1PWG DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 87.8928% -72 - C2 -1PWC DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 87.8228% -71 - C2 -1IKG DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 87.8128% -70 - C2 -1SCW DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 87.7928% -72 - C2 -1CEG DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
66 Fugue 87.7523% -58 - C2 -2QMI - ? A:[1-447] --------------------------------------MDVGKLESFIVEKMAERKVP-----------------------------------------GISI-SIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDPVEKFVNIK--LRPF------GEPVTVHHLLTHSSGIPSLGYAEAFIDGMVGGDN-WL----------------P-----------VSTP------------EETIAFARD--MEKWAVAKPGERFFYLNTGYVLLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYIL-D-K-------------EGRLV------------PQP-F--PYG-----ITADGGLLSSVLDLAKYLKMYIERDE--SIVSKEYIEKM---ETSY-------IKVPWEIFGGEGYGYGLI-----IYP-------NFLGEKLVGHSGSV--GM-YTGYIGYIPEKKIGVAVLENSSG--YPPSYIAMYALALLLGKNPEKELPFIYRERILKKVEGRYMGYKGTIKFEVKVDGDVVYLRALGRAFTYTIPLFPEVLEEDFIKCYTLSNGRKMYAEFYIKDNKVDLIFERYRLIKS
42 HHSearch 87.6626% -60 - C2 -1YQS DAC_STRSR A:[6-344] --------------------------------------------------------------------------------PDDTGLQAVLHTALS-QGAPGAMVRVDDNGT-IHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTN-DMFAQTVPGFESVRN---K-----------VFSY------------QDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLT-P-DEAG----------GALV-------------DST-EQTVSW-----AQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQM---QQWTTVN----S--------TQGYGLGLR-----RRDLSCGI--S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNVNVLNTMARTLESAFC-----------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 87.6528% -70 - C2 -1SDE DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 87.5928% -71 - C2 -1PWD DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
43 HHSearch 87.5124% -78 - C2 -3TG9 - ? A:[1-318] -------------------------------------------------------------------------------------MKNHLHTIMEDWKLSGTA-LMKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFTAIAICQLVEAGKLSFDTPLSDWLDAP------------FPNVTIHHLLTHTSGV-------------PDYFD--------------------EDLWKDVPMYHLRRL------------KDFLPLFQH--APMK--FPPGHRFHYNNAGFILLGLVVESVSGVTFQEYVEANVFQRAGMHESGYFAFDT-LPAKTALGYID-L-E-------------DGSWK------------TNL-YSLPVI-----GGSDGGAYVTAEDMMKLWLALMR--H--ELLNETYTQKL---LTPHVHCE---D--------DDYYGYGVW-----IKQQDGAI--S-----KYHVMGYD--PG-VCFHSAFYPTSNGIVVVCANQSSGA--------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 87.5028% -71 - C2 -3PTE - DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 87.0728% -70 - C2 -1MPL DAC_STRSR A:[22-329] -------------------------------------------------------------------------------------------------GAPGAM-VRVDDNGTIHQLSEGVADRATGRAITTTDRFRVGSVTKSFSAVVLLQLVDEGKLDLDASVNTYLPGL--L--P------DDRITVRQVMSHRSGL-------------YDYTNDMF----------------A-----------QTVPGFESVRNKVFSYQDLITLSLK--HGVT--NAPGAAYSYSNTNFVVAGMLIEKLTGHSVATEYQNRIFTPLNLTDTFYVHPDTVIPGTHANGYLTPD-E-------------AG----------------GA-LVDSTEQTVSWAQSAGAVISSTQDLDTFFSALMS--G--QLMSAAQLAQMQQWTTVN-------S--------TQGYGLGLRRRDLSCGI-------S-----VYGHTGTV--QG-YYTYAFASKDGKRSVTALANTSNNV--------------------------------------------------------------------------------------------------------------------
45 HHSearch 82.4623% -63 - C2 -2DRW ? A:[5-338] ----------------------------------------------------------------------------------NNAIQGILDDHVA-RGVVGVSLALCLPGEETSLYQSGYADKFNKMPMTGDHLFRIASCTKSFIATGLHLLVQDGTVDLDEPITRWFPDL--P--K------AAQMPVRILLNHRSGL-------------PDFET-SMPMISD-----------K-----------SWTA------------QEIVDFSFR--HGVQ--KEPWHGMEYSNTGYVLAGMIIAHETGKPYSDHLRSRIFAPLGMKDTWVGTHETFPIEREARGYMH-A-AADDENPQWDVSGAGDPVDGVWD--------STE-WFPLSG-----ANAAGDMVSTPRDIVKFLNALFD--G--RILDQKRLWEM---KDNI-------KPAFFPGSNTVANGHGLL-----LMRYGSS---E-----LKGHLGQI--PG-HTSIMGRDEETGAALMLIQNSGAGD--------------------------------------------------------------------------------------------------------------------
50 HHSearch 80.9620% -67 - C2 -1CI9 ESTB_BURGA A:[17-387] --------------------------------------------------------------------------------SLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELALDAPVTRWLPEF--R--PRLADGSEPLVTIHHLLTHTSGL-------------GYWLL-EGAGSVYDRLGISDGIDLR-----------DFDL------------DENLRRLAS--APLS--FAPGSGWQYSL-ALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEP---ERFAVPYHD-G-QPEPVRMRD-----GIEVPLPEGHGAAVRFAPSRVFEPGAY-----PSGGAGMYGSADDVLRALEAIRA--N--PGFLPETLADAA--RRDQAGVGAETR--------GPGWGFGYL-----SAVLDDPAAAG-----TPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGM-SGPLTIALRD--------------------------------------------------------------------------------------------------------
39 HHSearch 80.3724% -65 * C2 *2QMI - ? A:[3-332] ----------------------------------------------------------------------------------VGKLESFIVEKMAERKVPGISISIIKDGDVVYAKGFGYRNVEARLPSTPETIYGIGSITKSFTALAIMKLVEEGGLSLDDPVEKFVNIKLRP--F------GEPVTVHHLLTHSSGI-------------PSLGY-AEAFIDGMVGGDNWL---P-----------VSTP------------EETIAFARDMEKWAV--AKPGERFFYLNTGYVLLGKIIEKVSGVSYEEYIKKKILEPLGMNRSYFFKEEVEKDKDVAMGYIL-DKE-------------GRL---------------VP-QPFPYG-----ITADGGLLSSVLDLAKYLKMYIE--RDESIVSKEYIEKM---ETSY-------IKVPWEIFGGEGYGYGLI-----IYPNFLGE--K-----LVGHSGSV--GM-YTGYIGYIPEKKIGVAVLENSSGY---------------------------------------------------------------------------------------------------------------------