@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0570: (2016-03-16 )
MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK

Atome Classification :

(20 SA) .........10-..-.-....--..20.---..---------.....30-.......----------..40........50........60........70....----....80........90........100...--....110.......120.......130..-.....140.......150...---....160-.......170.......180.......190.......200.......210...---....220.......230.----....-...240.......250.......260....--...270...----------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKRDGHTHTE--FC-P-HGTH--DDVEE---MI---------LKAIEL--DFDEYSI----------VEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKM----NHIKKKYASDLLIHIGFEVDYLIGYEDFTR--DFLDEYGPQTDDGVLSLHFLEGQGGFRSI-DFSAEDYNEGIVQFYGGFEQA---QLTYLEG-VKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVK---KRDYELDFNTAGLFKS-L----CGET-YPPKEIVTLARELKIPLVYGSDSHGVQDIG--RGYNTYCQK----------------------------------
8 HHSearch 99.8393% -85 - C5 -3DCP ? A:[1-275] MKRDGHTHTE--FC-P-HGTH--DDVEE---MV---------LKAIEL--DFDEYSI----------VEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKM----NHIKKKYASDLLIHIGFEVDYLIGYEDFTR--DFLNEYGPQTDDGVLSLHFLEGQGGFRSI-DFSAEDYNEGIVQFYGGFEQA---QLAYLEG-VKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVK---KRDYELDFNTAGLFKP-L----CGET-YPPKKIVTLASELQIPFVYGSDSHGVQDIG--RGYSTYCQK----------------------------------
1 PsiBlast_PDB 99.3591% -85 * C5 *3DCP ? A:[2-275] -KRDGHTHTE--FC-P-HGTH--DDVEE---MV---------LKAIEL--DFDEYSI----------VEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKM----NHIKKKYASDLLIHIGFEVDYLIGYEDFTR--DFLNEYGPQTDDGVLSLHFLEGQGGFRSI-DFSAEDYNEGIVQFYGGFEQA---QLAYLEG-VKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVK---KRDYELDFNTAGLFKP-L----CGET-YPPKKIVTLASELQIPFVYGSDSHGVQDIG--RGYSTYCQK----------------------------------
2 PsiBlast_PDB 69.8927% -78 - C5 -2YXO ? A:[3-232] ---DSHVHTP--LC-G-H-AE--GHPEA---YL---------EEARAK--GLKGVVF----------TDHSPMPPWY------DPES----RMRLEALPFYLLAL----ERVRER-AQDLYVGIGLEADFHPGTEGFLA--QLLRRY--PFDYVIGSVHYL----GAWPL-DHP--DHQEEYA--WRDLKEV---FRAYFQE-VEKA--ARSGLFH--AIGHLDLPKKFGHRLPEEA------LLELAEPALRAVA---EAGLFLDVNTAGLRRP------AKEV-YPAPALLRRARELGIGLVLGSDAHRPEEVG---------------------------------------------
4 PsiBlast_PDB 69.8127% -78 - C5 -2Z4G ? A:[3-232] ---DSHVHTP--LC-G-H-AE--GHPEA---YL---------EEARAK--GLKGVVF----------TDHSPMPPWY------DPES----RMRLEALPFYLLAL----ERVRER-AQDLYVGIGLEADFHPGTEGFLA--QLLRRY--PFDYVIGSVHYL----GAWPL-DHP--DHQEEYA--WRDLKEV---FRAYFQE-VEKA--ARSGLFH--AIGHLDLPKKFGHRLPEEA------LLELAEPALRAVA---EAGLFLDVNTAGLRRP------AKEV-YPAPALLRRARELGIGLVLGSDAHRPEEVG---------------------------------------------
29 Fugue 69.7326% -60 - C5 -2YXO ? A:[1-263] -MVDSHVHTP--LC-G-HAE---GHPEA---YL---------EEARAK--GLKGVVF----------TDHSPMPPWYDPESR----------MRLEALPFYLLAL----ERVRERA-QDLYVGIGLEADFHPGTEGFLA--QLLRRYPF--DYVIGSVHYLGAWP--LDH-PDHQEEYAWR------DLKEV---FRAYFQE-VEKAARSG----LFHAIGHLDLPKKF------GHRLPEEALLELAEPALRAVA---EAGLFLDVNTAGLRRP-A-----KEV-YPAPALLRRARELGIGLVLGSDAHRPEEVG--FAFPEVQALLAGLGFREAYYFVEGSPVAYPL------------
3 PsiBlast_PDB 69.5127% -77 - C5 -2YZ5 ? A:[3-232] ---DSHVHTP--LC-G-H-AE--GHPEA---YL---------EEARAK--GLKGVVF----------TDHSPMPPWY------DPES----RMRLEALPFYLLAL----ERVRER-AQDLYVGIGLEADFHPGTEGFLA--QLLRRY--PFDYVIGSVHYL----GAWPL-DHP--DHQEEYA--WRDLKEV---FRAYFQE-VEKA--ARSGLFH--AIGHLDLPKKFGHRLPEEA------LLELAEPALRAVA---EAGLFLDVNTAGLRRP------AKEV-YPAPALLRRARELGIGLVLGSDAHRPEEVG---------------------------------------------
9 HHSearch 67.7526% -67 - C5 -2YXO ? A:[1-239] -MVDSHVHTP--LC-G-HAE---GHPEA---YL---------EEARAK--GLKGVVF----------TDHSPMPPWYDP----------ESRMRLEALPFYLLAL----ERVRERA-QDLYVGIGLEADFHPGTEGFLA--QLLR--RYPFDYVIGSVHYLGA----WPL-DHPDHQ-EE---YAWRDLKEV---FRAYFQE-VEKAAR----SGLFHAIGHLDLPKKFGHRLP------EEALLELAEPALRAVA---EAGLFLDVNTAGLRRP------AKEV-YPAPALLRRARELGIGLVLGSDAHRPEEVG--FAFPEVQ------------------------------------
15 HHSearch 57.9513% -78 - C5 -3B0X ? A:[337-538] VKGDLQVHST--YS---DGQ---NTLEE---LW---------EAAKTM--GYRYLAV----------TDHSPAVRVAG-------------GPSPEEALKRVGEI----RRFNETH-GPPYLLAGAEVDIHPDGTLD-----YPDWVLRELDLVLVSVHSRFN----L-----PK---------------------ADQTKR-LLKALE----NPFVHVLAHPTARLLGRR-AP---------IEADWEAVFQKAK---EKGVAVEIDGYYDR-----------M-DLPDDLARMAYGMGLWISLSTDAHQTDHLR--F------------------------------------------
11 HHSearch 54.0317% -59 - C5 -1M65 YCDX_ECOLI A:[2-207] YPVDLHMHTV--AS-T-HAY---STLSD---YI---------AQAKQK--GIKLFAI----------TDHGPDMEDAP------------------HHWHFINM------RIWPRVVDGVGILRGIEANIKNVDG-EID---CSGKMFDSLDLIIAGFHEPVF----------AP---------------HD---KATNTQA-MIATIA----SGNVHIISHPGNPKYEI----------------DVKAVAEAAA---KHQVALEINNSS----------------NCREVAAAVRDAGGWVALGSDSHTAFTMG---EFEECLK-----------------------------------
12 HHSearch 49.1117% -62 - C5 -2W9M ? A:[327-525] LRGMIHTHST--WS---DGG---ASIRE---MA---------EATLTL--GHEFLGT----------ADHSRAAYYAN-------------GLTIERLREQLKEI----RELQR---AGLPIVAGSEVDILDDGSL-----DFPDDVLGELDYVVVSVHSNFT------L---D---------------------AARQTER-LIRAVS----HPLVTVLGHATGRLLLRR----------PGYALDLDAVLGACE---ANGTVVEINANAARLD-----------LDWREALRW--RERLKFAINTDAHVPGGLR--D------------------------------------------
13 HHSearch 47.3216% -55 - C5 -3QY7 YWQE_BACSU A:[1-208] -MIDIHCHILPAMD---DGAGDSADSIE---MA---------RAAVRQ--GIRTIIA----------TPHHNNGVYKN---------------EPAAVREAADQL----NKRLIKEDIPLHVLPGQEIRIYGEVEQDLAKRQLLS--LNDTKYILIE---------------FPFD---------------H---VPRYAEQLFYDLQL----KGYIPVIAHPERNREIR----------------ENPSLLYHLV---EKGAASQITSGSLAGI------FG---KQLKAFSLRLVEANLIHFVASDAHNVKTRN--FHTQEA-------------------------------------
14 HHSearch 47.3013% -53 - C5 -3WYZ ? A:[20-191] -------------------------DEE---AH---------ELA-SD--WFDEVVF----------TKKLVLEDPP-------------------DWGSLKEEL----KELRGKY-GKVALL----LVTRKP--SLIR---EVK-SRNLKA--LLYVQGGDM-------------------------------------RI-NRMAIE----S-GVDALISPWFGRK-DP--------------GFDHTLAGMAA---RRGVAIGFSLSPLLNA-NPYGRAQIL-RFMMKTWQLVKKYRVPRFITSSAESRWEVR--G-PRDL-------------------------------------
10 HHSearch 46.8719% -54 - C5 -2WJE CPSB_STRPN A:[4-218] GMIDIHSHIV--FDVD-DGP---KSREESKALL---------AESYRQ--GVRTIVS----------TSHRRKGMFET---------------PEEKIAENFLQV----REIAKEVASDLVIAYGAEIYYTPDVLDKL------E--KKRI-PTLNDSRYAL-------I-EFSM--------------NTP---YRDIHS--ALSKILM---LGITPVIAHIERYDALE----------------NNEKRVRELI---DMGCYTQVNSSHVLKPKL----FGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRP--PHMAEAY------------------------------------
30 Fugue 46.2617% -49 - C5 -1M65 YCDX_ECOLI A:[2-245] YPVDLHMHTV--AS-T-HA-Y--STLSD---YI---------AQAKQK--GIKLFAI----------TDHGPDMEDAPHHWHFINMRI------------------------WPRVVDGVGILRGIEAN--IKNVDGEI--DCSGKMFDSLDLIIAGFHE-----------------------------PVF---APHDKAT-NTQAMIATIASGNVHIISHPG----------------NPKYEIDVKAVAEAAA---KHQVALEINN---------------S-SNCREVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPERILNVSPRRLLNFLESRGMAPIAEFADL
21 HHSearch 44.6914% -43 - C5 -1V77 - RNP3_PYRHO A:[19-177] --------------------------------A---------YELAKE--WFDEVVV----------SIKFNEEVDK-------------------------EKL----RE-------ARKEYGKVAILLSNPKPSLVR--DTVQKFK--SYLI--YVESND------------L-------------------------RV-IRYSIE----K-GVDAIISPWVNRKDP---G------------IDHVLAKLMV---KKNVALGFSLRPLLYS-NPYERANLL-RFMMKAWKLVEKYKVRRFLTSSAQEKWDVR--Y------------------------------------------
20 HHSearch 37.9813% -27 - C5 -2HPI DPO3A_THEAQ A:[6-279] KFAHLHQHTQ--FS-LLDGA---AKLQD---LL---------KWVKETTPEDPALAM----------TDHGNLFGAV----------------------EF---Y----KKATA---MGVKPIIGYEAYVAAESRFDRK--RG-----GYFHLTLLAKDFTG----YQNLVRLASR----------AYLEGFYEKPRIDREI-L-REH-----AQGLIALSGCLGAEIPQFILQD----R----LDLAEARLNEDLSIFGDRFFIEIQNHGLPE---------QK-KVNQVLKEFARKYGLGMVATNDGHYVRKED--ARAHEV-------------------------------------
19 HHSearch 37.4213% -23 - C5 -2ANU ? A:[20-219] LLCDFHVHTN--MS---DGH---LPLGE---VV---------DLFGKH--GVDVVSI----------TDHIVDRRTLEQRKRNGEPL---GAITEDKFQDYLKRLWREQKRAWEE--YGMILIPGVEITNNTDLYH-IV--AV----DV-KEY-V------D------------P---------------------SLPVEE-IVEKLKE---QNALVIAAHPDRKK-----LS--------W---YLWANMERFK---DTFDAWEIANRDDL-------------------FNSVGVKKYRYVANSDFHELWHVY--SWKTLV-------------------------------------
26 HHSearch 35.956% -52 - C5 -3RYS ? A:[232-284] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVVQRLV---AEQVPLTVCPLSNVRL-R----AVDK--LADHPLPEMLAIGLNVCVNSDDPAY-------------------------------------------------
25 HHSearch 35.704% -42 - C5 -3IAR ADA_HUMAN A:[245-296] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LYNRLR---QENMHFEICPWSSYLT-G----AWKP--DTEHAVIRLKNDQANYSLNTDDPLI-------------------------------------------------
5 PsiBlast_PDB 34.9121% -57 - C4 -4FNV - HEPC_BACTN A:[135-253] VKQDGGINWE--YS-P-KDAS--DEYQK---QLHRHQWFIPQAKAYRV--SGDEKYIQSWIEVYKNWIENNPKPTTGPNTTSWWQLQVSTRIGDQVQLLEYFKNS----VNFTPEWLSTFLVEFAEQADFLVDY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------