@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0764: (2016-03-18 )
VIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKFTEPVIRALRKLGVNAELSGRNDIEVNGKKISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETKDIPRYTFTEADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIYGDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE

Atome Classification :

(20 SA) .........10........20......-.-.30...-.....40........50........60........70........80.......-.-90...-.....100.......110.--.--....----------.120----------.....----------..-130........140.......150.......160.......170.......180.......190.......200--.--.....---------------..210-.-..---.----.....---220........230-........240.......250...--....260.......270.......-280.-......290.......300.......310.......320.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VIYLDNEDVLDQAYNFAMEEYALRSLD-E-NETYFM-FYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMI-T-KDDGN-SFQNFAKFTEPVIRALRKL--G--VNAE----------LSGR----------NDIEV----------NG-K-KISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQI---L--LESIF---------------ETK---D-IP---R----YTFTE---AD-KQGIEKLRTE--RYRNWDWTYGKSPKATIKRKKRFP--AGTIEFQVSLEKGQVKEATIYGDF-FGTE-DVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE
25 HHSearch 96.9042% -91 - C4 -1VQZ ? A:[14-340] -KYII-NHSNDTAFNIALEEYAFKHLL-D-EDQIFL-LWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTII-S-KEDEN-KAFDFKSFSTPVINTLAQL--G--VKAE----------FTGR----------NDLEI----------DG-K-KFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDL---L--LEYMK---------------KEY---PEMT---E----YVFSE---EE-LAEINRIKDT--KFGTWDWNYGKSPEFNVRRGIKFT--SGKVEVFANVTESKIQDIKIYGDF-FGIE-DVAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAVV-
1 PsiBlast_PDB 95.7843% -83 - C4 -1VQZ ? A:[22-339] ----------DTAFNIALEEYAFKHLL-D-EDQIFL-LWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTII-S-KEDEN-KAFDFKSFSTPVINTLAQL--G--VKAE----------FTGR----------NDLEI----------DG-K-KFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDL---L--LE--Y---------------MKK---E-YPEMTE----YVFSE---EE-LAEINRIKDT--KFGTWDWNYGKSPEFNVRRGIKFT--SGKVEVFANVTESKIQDIKIYGDF-FGIE-DVAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAV--
26 HHSearch 84.2130% -74 * C4 *3A7R LPLA_ECOLI A:[3-333] LRLLI-SDSYDPWFNLAVEECIFRQMP-A-TQRVLF-LWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A-GKPE----YDKTISTSIVLNALNAL--G--VSAE----------ASGR----------NDLVVKTVE------GD-R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLP-GITHEQVCEA---I--TEAFF---------------AHY---G-ER---VEA--EIISPNKTPD-LPNFAETFAR---QSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMA-
3 PsiBlast_PDB 81.8931% -75 - C4 -3A7R LPLA_ECOLI A:[9-313] -------DSYDPWFNLAVEECIFRQMP-A-TQRVLF-LWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A----GK-PEYDKTISTSIVLNALNAL--G--VSAE----------ASGR----------NDLVVKTVE------GD-R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG----ITHEQVCEAI--TEAFFAHYGERVEAEIISPNKTP---D-LP---N----FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQ---QECEA------------------
6 PsiBlast_PDB 81.4830% -71 - C4 -4TVW LPLA_ECOLI A:[13-317] -------DSYDPWFNLAVAECIFRQMP-A-TQRVLF-LWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A----GK-PEYDKTISTSIVLNALNAL--G--VSAE----------ASGR----------NDLVVKTVE------GD-R-KVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG----ITHEQVCEAI--TEAFFAHYGERVEAEIISPNKTP---D-LP---N----FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQ---QECEA------------------
21 PsiBlast_CBE 81.4131% -68 - C4 -3A7A LPLA_ECOLI C:[9-313] -------DSYDPWFNLAVEECIFRQMP-A-TQRVLF-LWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A----GK-PEYDKTISTSIVLNALNAL--G--VSAE----------ASGR----------NDLVVKTVE------GD-R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG----ITHEQVCEAI--TEAFFAHYGERVEAEIISPNKTP---D-LP---N----FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQ---QECEA------------------
2 PsiBlast_PDB 80.9131% -77 - C4 -3A7A LPLA_ECOLI A:[9-313] -------DSYDPWFNLAVEECIFRQMP-A-TQRVLF-LWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A----GK-PEYDKTISTSIVLNALNAL--G--VSAE----------ASGR----------NDLVVKTVE------GD-R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG----ITHEQVCEAI--TEAFFAHYGERVEAEIISPNKTP---D-LP---N----FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQ---QECEA------------------
5 PsiBlast_PDB 77.3331% -77 - C4 -1X2H LPLA_ECOLI A:[9-313] -------DSYDPWFNLAVEECIFRQMP-A-TQRVLF-LWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFM-A----GK-PEYDKTISTSIVLNALNAL--G--VSAE----------ASGR----------NDLVVKTVE------GD-R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAK-------RVTNLTELLPG----ITHEQVCEAI--TEAFFAHYGERVEAEIISPNKTP---D-LP---N----FAETF---A--------------RQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPA-PLEALAGRLQGCLYRADMLQ---QECEA------------------
28 HHSearch 75.7931% -84 - C4 -2C8M LPLAN_THEAC A:[5-256] -LLLL-ETPGNTRMSLAYDEAIYRSFQ-YGDKPILR-FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVV-R-SSDDMDITSMFRTMNEAVVNSLRIL--G--LDAR----------PGELNDVSIPVNKKTDIMA----------GE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETL---H-IDFR-E----DTITE---KE-ESLARELFDK--KYSTEEWNMGL-------------------------------------------------------------------------------------------
27 HHSearch 75.6323% -76 - C4 -2E5A LIPT_BOVIN A:[6-340] -LILQ-SISNDVYHNLAVEDWIHDHMN-LEGKPVLF-LWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFF-T-TKKK----YDRMENLKLVVRALKAVHPH--LDVQ----------ATKR----------FDLLL----------DGQF-KISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDP-TLTCEVVINA---V--ATEYA---------------TSH---Q-ID---NHIHLINPTD---ETVFPGINSKAIE---LQTWEWIYGKTPKFSVDTSFTVLHSHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGSKFSPIETTV-------------DELHSKWNILC-
12 PsiBlast_PDB 71.1630% -75 - C4 -2ARS LPLAN_THEAC A:[17-255] --------------SLAYDEAIYRSFQ-Y-GDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDARPGELNDVSIPVNKK----------TDIMA----------GE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
10 PsiBlast_PDB 68.8831% -89 - C4 -2C8M LPLAN_THEAC A:[38-255] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPVNKKTDIMAGE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
8 PsiBlast_PDB 68.7531% -82 - C4 -2ARU LPLAN_THEAC A:[38-255] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPVNKKTDIMAGE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
24 PsiBlast_CBE 68.5331% -88 - C4 -2C8M LPLAN_THEAC B:[38-255] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPVNKKTDIMAGE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
23 PsiBlast_CBE 67.7531% -80 - C4 -2C8M LPLAN_THEAC C:[38-255] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPVNKKTDIMAGE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
7 PsiBlast_PDB 67.6331% -84 - C4 -2ART LPLAN_THEAC A:[38-255] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPVNKKTDIMAGE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
22 PsiBlast_CBE 67.5931% -80 - C4 -2C8M LPLAN_THEAC D:[38-255] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPVNKKTDIMAGE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
11 PsiBlast_PDB 67.4631% -77 - C4 -3R07 LPLAN_THEAC A:[61-278] -------------------------------------FYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRS-SDDMD-ITSMFRTMNEAVVNSLRIL--G--LDAR----------PGEL----------NDVSIPV--------GE-K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFV--DVSIDEVRNA---L--IRGFS---------------ETLHI-D-FR---E----DTITE---KE-ESLARELFDK--KYSTEEWNMG--------------------------------------------------------------------------------------------
14 PsiBlast_PDB 67.4526% -71 - C4 -3A7U - LIPT_BOVIN A:[14-255] ----------DVYHNLAVEDWIHDHMNLE-GKPVLF-LWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFF-TTKKKYD-RMENL----KLVVRALKAV--HPHLDVQ----------ATKR----------FDLLL----------DG-QFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLK----------------------KNLMEKDPTLTCEVV---INAVATEY---------------ATSHQID-NH---I----HLINP---TD-ETVFPGINSKAIELQTWEWIYGKTPKFSV-------------------------------------------------------------------------------------
13 PsiBlast_PDB 67.2226% -65 - C4 -2E5A LIPT_BOVIN A:[14-269] ----------DVYHNLAVEDWIHDHMNLE-GKPVLF-LWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFF-TTKKKYD-RMENL----KLVVRALKAV--HPHLDVQ----------ATKR----------FDLLL----------DG-QFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALV----KNLMEKDPTLTCEVV---INAVATEY---------------ATSHQID-NH---I----HLINP---TD-ETVFPGINSKAIELQTWEWIYGKTPKFSV-------------------------------------------------------------------------------------