@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0807: (2016-03-18 )
VTETIIRFENVTKQFDNDPPVLDNVSFEIEKGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYLGDKVINQIPANKRPVNTVFQDYALFPHLNVYENVAFGLRIKKLKKEAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILLDEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQSGTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVVIRPEDLEITSAEKGQLQVTVDWMLFRGVHYEVGCIDIDGNEWLVHTTRKVRVGDKIGLAFEPEAIHVMRLGETEEEFDKRLDSYDEVQ

Atome Classification :

(43 SA) .........10......-..20---.---........30........40........50........60...--------.-------.-------...70---.-----.------....------...80....--....90........100-.......110.......120....-...130----.......140.......150.......160.......170.......180....---...190.......200.......210.......220.......230.......240.........250-----.--..-----...--.----..260.--.-----.----.---.----..270----.....--..280...---..------.------..------.290.......300.----......310...-.-...320.--.--.--..--....330.......340.......350.......360..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VTETIIRFENVTKQFDN-DPP----V---LDNVSFEIEKGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIY--------L-------G-------DKVI----N-----Q------IPAN------KRPVNTVFQ--DYALFPHLNVYENVAFG-LRIKKLKKEAIDEKVKEALRFVNL-KGYEKR----EISEMSGGQRQRVAIARAIVNEPEVILLDEPLSALDLKLRTEMQYELRDLQKRL---GITFIFVTHDQEEALAMSDEIFVLNKGEIQQSGTPIDIYDEPINKFVADFIGES--NIVNGKMIQD-------F--EV-----EFV--E----RRFECV--D-----Q----G---F----RPNEV----VEVVI--RPE--DLE---IT------S------AE------KGQLQVTVDWMLFRG----VHYEVGCIDIDG-N-EWLV--H--T--T--RK--VRVGDKIGLAFEPEAIHVMRLGETEEEFDKRLDSYDEVQ
115 HHSearch 91.6039%-113 - C2 -1Z47 ? A:[13-354] ---MTIEFVGVEKIYPG-GAR----S---VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVW--------I-------G-------GKRV----T-----D------LPPQ------KRNVGLVFQ--NYALFQHMTVYDNVSFG-LREKRVPKDEMDARVRELLRFMRL-ESYANR----FPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEM---GVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES--NVWTRAVQNG-------R---I-----EVA--G----AALPVD--------P----A---V----SEGSE----VAVVV--RPK--DVE---LQ------P------AS------EREAHAQVVRSAFKG----SYSACWIRTKDG-E-VWEV--HVPSADR--HR--WSPGAWVHMNV--TRWFIFP-------------------
131 Fugue 91.5139%-106 - C2 -1Z47 ? A:[11-355] -GSMTIEFVGVEKIYPG-GAR----S---VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVW--------I-------G-------GKRV----T-----D------LPPQ------KRNVGLVFQ--NYALFQHMTVYDNVSFG-LREKRVPKDEMDARVRELLRFMRL-ESYANR----FPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEM---GVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES--NVWTRA-VQN-------G--RI-----EVA--G----AALP-V--D-----P----A---V----SEGSE----VAVVV--RPK--DVE---LQ------P------AS------EREAHAQVVRSAFKG----SYSACWIRTKDG-E-VWEV--H--V--P--SADRHRWSPGAWVHMNVTRWFIFPR------------------
1 PsiBlast_PDB 89.8342%-107 - C2 -1Z47 ? A:[15-328] -----IEFVGVEKIYPG-GAR----S---VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVW--------I-------G-------GKRV----T-----D------LPPQ------KRNVGLVFQ--NYALFQHMTVYDNVSFG-LREKRVPKDEMDARVRELLRFMRL-ESYANR----FPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEM---GVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES--NVWT-RAVQN-------G--RI-----EVA--G----AALP-V--D-----P----A---V----SEGSE----VAVVV--RPK--DVE---LQ------P------AS------EREAHAQVVRSAFKG----SYSACWIRTKDG-E-VWEV--H---------------------------------------------------
2 PsiBlast_PDB 89.8240%-113 - C2 -2D62 ? A:[7-367] -----VKLINIWKRF-G-DVT----A---VKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQIY--------I-------E-------DNLV----A-----DPEKGVFVPPK------ERDVAMVFQ--SYALYPHMTVYDNIAFP-LKLRKVPKQEIDKRVREVAEMLGL-TELLNR----KPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQL---GVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFIGSPPMNFLDATITDDGFLDFGEF--KL-----KLL--Q----DQFEVL--E-----E----E---N----MVGKE----VIFGI--RPE--DVH---DA------SFTHIDVPE------ENTVKATVDIIENLGGEKIVHLRRGNISFTA-K----F--P--K--E--SK--VREGDEVSVVFDMKKIHIFR-------------------
21 PsiBlast_CBE 89.3942%-107 - C2 -1Z47 ? B:[15-328] -----IEFVGVEKIYPG-GAR----S---VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVW--------I-------G-------GKRV----T-----D------LPPQ------KRNVGLVFQ--NYALFQHMTVYDNVSFG-LREKRVPKDEMDARVRELLRFMRL-ESYANR----FPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEM---GVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGES--NVWT-RAVQN-------G--RI-----EVA--G----AALP-V--D-----P----A---V----SEGSE----VAVVV--RPK--DVE---LQ------P------AS------EREAHAQVVRSAFKG----SYSACWIRTKDG-E-VWEV--H---------------------------------------------------
3 PsiBlast_PDB 89.2342%-114 - C2 -4TQU - ? S:[5-323] -----VSIQNVVKRYDK-TT-----V---VHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIR--------I-------D-------GRVI----N-----D------LAPK------DRDVAMVFQ--NYALYPHLNVRDNISFG-LRLKRTKKSVIDAAVKTAADILGL-QPLLER----KPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRL---GTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVD----------ST-----QHV--ELNGGNRISLL--P-----R----AGTHL----APGQE----VVFGI--RPE--DVTLDGVE------G------SE------RAQIKATVD----------------IVEPLG-S-ESIL--H--A--T--------VGD----------------------------------
4 PsiBlast_PDB 88.1242%-113 - C2 -4TQV - ? C:[5-323] -----VSIQNVVKRYDK-TT-----V---VHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIR--------I-------D-------GRVI----N-----D------LAPK------DRDVAMVFQ--NYALYPHLNVRDNISFG-LRLKRTKKSVIDAAVKTAADILGL-QPLLER----KPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRL---GTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVD----------ST-----QHV--ELNGGNRISLL--P-----R----AGTHL----APGQE----VVFGI--RPE--DVTLDGVE------G------SE------RAQIKATVD----------------IVEPLG-S-ESIL--H--A--T--------VGD----------------------------------
22 PsiBlast_CBE 87.9942%-104 - C2 -2IT1 ? B:[4-330] -----IKLENIVKKFGN-FT-----A---LNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIY--------F-------D-------EKDV----T-----E------LPPK------DRNVGLVFQ--NWALYPHMTVYKNIAFP-LELRKAPREEIDKKVREVAKMLHI-DKLLNR----YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL---GITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMNFVEAK-VED-------G--KL-----VIT--E----KSKLPI--P-----K----Q---YVEIVKETGI----TEVIIGFRPH--DAE---IV------K------GE------G------------EG----IVGEVYSFEPLG-R-EQIV------------T--VSVNDSIVKVFAPEGEH----------------------
5 PsiBlast_PDB 87.8842%-101 - C2 -2IT1 - ? A:[4-330] -----IKLENIVKKFGN-FT-----A---LNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIY--------F-------D-------EKDV----T-----E------LPPK------DRNVGLVFQ--NWALYPHMTVYKNIAFP-LELRKAPREEIDKKVREVAKMLHI-DKLLNR----YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL---GITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMNFVEAK-VED-------G--KL-----VIT--E----KSKLPI--P-----K----Q---YVEIVKETGI----TEVIIGFRPH--DAE---IV------K------GE------G------------EG----IVGEVYSFEPLG-R-EQIV------------T--VSVNDSIVKVFAPEGEH----------------------
116 HHSearch 86.5236%-102 - C2 -3RLF MALK_ECOLI A:[2-362] ---ASVQLQNVTKAWGE--VV----V---SKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF--------I-------G-------EKRM----N-----D------TPPA------ERGVGMVFQ--SYALYPHLSVAENMSFG-LKLAGAKKEVINQRVNQVAEVLQL-AHLLDR----KPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL---GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTAT-------A--IDQVQV-ELPMPNR---QQVWLPVES-----R----D---V----QVGAN----MSLGI--RPE--HLL---PS------D------IA------DVILEGEVQVVEQLG----NETQIHIQIPSIRQ-NLVY--R--QNDV--VL--VEEGATFAIGLPPERCHLFREDGTAC-------------
110 HHSearch 84.4740%-102 - C2 -2IT1 - ? A:[2-354] ---VEIKLENIVKKFGN--FT----A---LNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIY--------F-------D-------EKDV----T-----E------LPPK------DRNVGLVFQ--NWALYPHMTVYKNIAFP-LELRKAPREEIDKKVREVAKMLHI-DKLLNR----YPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL---GITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMNFVEAKVEDG-------K--LV-----ITE--K----SKLPIP--KQYVEIV----K---E----TGITE----VIIGF--RPH--DAE---IV------K------GE------GEGIVGEVYSFEPLG----REQIVTVSVNDS---IVKVFAP--E--G--EH--FSFGEKVTIKVKEELLVLFDKKTE---------------
112 HHSearch 84.0738% -99 - C2 -2YYZ ? A:[2-355] ---PSIRVVNLKKYFGK--VK----A---VDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIY--------F-------D-------DVLV----N-----D------IPPK------YREVGMVFQ--NYALYPHMTVFENIAFP-LRARRISKDEVEKRVVEIARKLLI-DNLLDR----KPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQEL---GITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTNFLRDFSVSV-------ENKQTIL---KRD--D----VIIKLP--E-----P----V---D----VKLKE----VVVGI--RPE--HCR---IS------R------ERV-----ENSIPGVVYVVEPLG----RDIIVNVKTEKG-E-IIKV--FGDT--G--KA--PQPGENVFLVPDLRKIHLFNPETE---------------
118 HHSearch 82.5833%-102 - C2 -1OXX ? K:[1-352] --MVRIIVKNVSKVFKKGKVV----A---LDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELY--------F-------D-------DRLV----A-----SNGKLI-VPPE------DRKIGMVFQ--TWALYPNLTAFENIAFP-LTNMKMSKEEIRKRVEEVAKILDI-HHVLNH----FPRELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRL---GVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEI--NELEGKVTNE-------G--VV------IG--S------LRFP-------------V---S----VSSDR----AIIGI--RPE--DVK---LS------K------DVIKDDSWILVGKGKVKVIGYQG----GLFRITITPLDS-EEEIFT--Y--S--D--HP--IHSGEEVLVYVRKDKIKVFEK------------------
111 HHSearch 81.0339%-105 - C2 -1V43 - ? A:[10-369] --MVEVKLENLTKRFGN--FT----A---VNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIY--------F-------G-------DRDV----T-----Y------LPPK------DRNISMVFQ--------HMTVYENIAFP-L--KKFPKDEIDKRVRWAAELLQI-EELLNR----YPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKL---KVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMNILEVSVGDG-------Y--L------EGR--G----FRIELP--Q------MDLLK---D----YVGKT----VLFGI--RPE--HMT---VE------G------V-HMKR--TARLIGKVDFVEALG----TDTILHVKFGDE---LVKV--KLPG--H--IP--IEPGREVKVIMDLDMIHVFDKDTE---------------
133 Fugue 80.5134% -90 - C2 -1OXS ? C:[1-352] --MVRIIVKNVSKVFKKGKVV----A---LDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELY--------F-------D-------DRLV----ASNGKLI------VPPE------DRKIGMVFQ--TWALYPNLTAFENIAFP-LTNMKMSKEEIRKRVEEVAKILDI-HHVLNH----FPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRL---GVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEI--NELEGKVTNE----------GV-----VIG--S----LRFP---------------V---S----VSSDR----AIIGI--RPE--DVK---LSKDVIKDD------SW------ILVGKGKVKVIGYQG-----GLFRITITPLD-S-EEEI--F--T--YSDHP--IHSGEEVLVYVRKDKIKVFEK------------------
8 PsiBlast_PDB 76.8043%-101 - C2 -2YYZ ? A:[4-288] -----IRVVNLKKYFGK-VKA----V----DGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIY--------F-------D-------DVLV----N-----D------IPPK------YREVGMVFQ--NYALYPHMTVFENIAFP-LRARRISKDEVEKRVVEIARKLLI-DNLLDR----KPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQEL---GITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNP--PT---NFLRD-------F--SVSVENKQTI--L----KRDDVI--I-----K----L---P----EPVDVKLKEVVVGI--RPE--HCR---IS-----------------------------------------------------------------------------------------------------------------
41 PsiBlast_CBE 76.4538%-103 - C2 -1OXV ? D:[4-284] -----IIVKNVSKVFKK-GKV----VA--LDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELY--------F-------D-------DRLV----A-----SNGKLI-VPPE------DRKIGMVFQ--TWALYPNLTAFENIAFP-LTNMKMSKEEIRKRVEEVAKILDI-HHVLNH----FPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRL---GVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEI--NELEGKVTNE----------GV-----VIG--S----LRFPVS--V-----S----S---D----R--------AIIGI--RPE--DVK---LS-----------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 75.7245%-114 - C2 -3PUZ MALK_ECOLI B:[4-239] -----VQLQNVTKAW-G-EVV----V---SKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF--------I-------G-------EKRM----N-----D------TPPA------ERGVGMVFQ--SYALYPHLSVAENMSFG-LKLAGAKKEVINQRVNQVAEVLQL-AHLLDR----KPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL---GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSP--KM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 75.6045%-116 - C2 -3PUV MALK_ECOLI A:[4-239] -----VQLQNVTKAW-G-EVV----V---SKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLF--------I-------G-------EKRM----N-----D------TPPA------ERGVGMVFQ--SYALYPHLSVAENMSFG-LKLAGAKKEVINQRVNQVAEVLQL-AHLLDR----KPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL---GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSP--KM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------