Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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3D Common Core:

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Complexes Modeling

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Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1027: (2016-03-20 )
MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYLVKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASALIRNKLEEHGLLRQTKIYEYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNIFRDVEGRIIFATFASNIYRLQQVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPKDTFIDVHQLNKTPAGNVTILCTGSQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNTTSVNRTINLLYQAGAEVIHGKVNNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGEFRMQKIHAESAEECGVPEENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFIYMRESGNLIGEAQGLLTRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV

Atome Classification :

	(20 SA)									.........10........20........30........40.--------------------...--.-----.-..-------50.....----------...60-----------.....-....70........80......-----..--90----.........100.......110.---------.----------------...-.---------.120---------........130-........140.......---150..--.--....160.....------..170-.......180---........190.......200..--------..--...-210.......-220--.---.......230.......240.......-----250------.-------........260...---...-.-270..--------------.---------..-------..280-----.---.-.---....-.-.290......-.300--.........310.......320.......330......-.340--.-----.------.-..-----...-350----......-.--360-.-......370.......380--.......390.......400..-.....---410.......420.......430.......440.......450.......460.......470.......480...----....490.......500.......510-.......520.......530.......540.......550...
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKF--------------------PED--E-----L-LG-------IDYVIPD----------YSYL------------VKNKD-KIKGLFITHGHEDHIGGVPYLL-----RD--L-----NIPIYAGKLASALIRNKLEEHGL---------L----------------RQT-K---------IYE----------YEEDDVFKF-R-KTSISFFRTTHSIPDTYG---IVVKT--P--SGNIVHTGDFKF------DFTPV-GEPANLTKM----AEIGKEGVLCLLSDSTNAEVPNF--------TM--SER-VVGESIKNIF-RD---V---EGRIIFATFASNIYRLQQVVESSIETG-----R--------K-------IAVFGRSMESAMEI---GKQ-L-GYIQA--------------P---------KD-------TFI-------D---V-H---QLNK-T-PAGNVTILCT-GS----QGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPIPGNT-TS-V--N-----R------T-IN-----LLY-QAG----AEVIHG-K--VNN-I-HTSGHGGQQEQKLMLRLMK--PKFFMPIHGEFRMQKIHAESAE-ECGVP---EENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPD----IISRGFIYMRESGNLIGEAQGLLTRHL-NKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV
1	PsiBlast_PDB	99.69	81%	-113	- C1 -	3ZQ4		RNJ1_BACSU	A:[6-555]	-----NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKF--------------------PED--E-----L-LG-------IDYVIPD----------YTYL------------VKNED-KIKGLFITHGHEDHIGGIPYLL-----RQ--V-----NIPVYGGKLAIGLLRNKLEEHGL---------L----------------RQT-K---------LNI----------IGEDDIVKF-R-KTAVSFFRTTHSIPDSYG---IVVKT--P--PGNIVHTGDFKF------DFTPV-GEPANLTKM----AEIGKEGVLCLLSDSTNSENPEF--------TM--SER-RVGESIHDIF-RK---V---DGRIIFATFASNIHRLQQVIEAAVQNG-----R--------K-------VAVFGRSMESAIEI---GQT-L-GYINC--------------P---------KN-------TFI-------E---H-N---EINR-M-PANKVTILCT-GS----QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNT-IS-V--S-----R------T-IN-----QLY-RAG----AEVIHG-P--LND-I-HTSGHGGQEEQKLMLRLIK--PKFFMPIHGEYRMQKMHVKLAT-DCGIP---EENCFIMDNGEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPD----LISRGFVYMRESGDLINDAQELISNHL-QKVMERKTTQWSEIKNEITDTLAPFLYEKTKRRPMILPIIMEV
21	PsiBlast_CBE	99.24	81%	-114	- C1 -	3ZQ4		RNJ1_BACSU	E:[6-555]	-----NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKF--------------------PED--E-----L-LG-------IDYVIPD----------YTYL------------VKNED-KIKGLFITHGHEDHIGGIPYLL-----RQ--V-----NIPVYGGKLAIGLLRNKLEEHGL---------L----------------RQT-K---------LNI----------IGEDDIVKF-R-KTAVSFFRTTHSIPDSYG---IVVKT--P--PGNIVHTGDFKF------DFTPV-GEPANLTKM----AEIGKEGVLCLLSDSTNSENPEF--------TM--SER-RVGESIHDIF-RK---V---DGRIIFATFASNIHRLQQVIEAAVQNG-----R--------K-------VAVFGRSMESAIEI---GQT-L-GYINC--------------P---------KN-------TFI-------E---H-N---EINR-M-PANKVTILCT-GS----QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNT-IS-V--S-----R------T-IN-----QLY-RAG----AEVIHG-P--LND-I-HTSGHGGQEEQKLMLRLIK--PKFFMPIHGEYRMQKMHVKLAT-DCGIP---EENCFIMDNGEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPD----LISRGFV------DLINDAQELISNHL-QKVMERKTTQWSEIKNEITDTLAPFLYEKTKRRPMILPIIMEV
23	PsiBlast_CBE	98.49	81%	-113	- C1 -	3ZQ4		RNJ1_BACSU	C:[6-555]	-----NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKF--------------------PED--E-----L-LG-------IDYVIPD----------YTYL------------VKNED-KIKGLFITHGHEDHIGGIPYLL-----RQ--V-----NIPVYGGKLAIGLLRNKLEEHGL---------L----------------RQT-K---------LNI----------IGEDDIVKF-R-KTAVSFFRTTHSIPDSYG---IVVKT--P--PGNIVHTGDFKF------DFTPV-GEPANLTKM----AEIGKEGVLCLLSDSTNSENPEF--------TM--SER-RVGESIHDIF-RK---V---DGRIIFATFASNIHRLQQVIEAAVQNG-----R--------K-------VAVFGRSMESAIEI---GQT-L-GYINC--------------P---------KN-------TFI-------E---H-N---EINR-M-PANKVTILCT-GS----QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNT-IS-V--S-----R------T-IN-----QLY-RAG----AEVIHG-P--LND-I-HTSGHGGQEEQKLMLRLIK--PKFFMPIHGEYRMQKMHVKLAT-DCGIP---EENCFIMDNGEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPD----LISRGFV--------INDAQELISNHL-QKVMERKTTQWSEIKNEITDTLAPFLYEKTKRRPMILPIIMEV
22	PsiBlast_CBE	98.26	81%	-115	- C1 -	3ZQ4		RNJ1_BACSU	D:[6-555]	-----NDQTAVFALGGLGEIGKNTYAVQFQDEIVLIDAGIKF--------------------PED--E-----L-LG-------IDYVIPD----------YTYL------------VKNED-KIKGLFITHGHEDHIGGIPYLL-----RQ--V-----NIPVYGGKLAIGLLRNKLEEHGL---------L----------------RQT-K---------LNI----------IGEDDIVKF-R-KTAVSFFRTTHSIPDSYG---IVVKT--P--PGNIVHTGDFKF------DFTPV-GEPANLTKM----AEIGKEGVLCLLSDSTNSENPEF--------TM--SER-RVGESIHDIF-RK---V---DGRIIFATFASNIHRLQQVIEAAVQNG-----R--------K-------VAVFGRSMESAIEI---GQT-L-GYINC--------------P---------KN-------TFI-------E---H-N---EINR-M-PANKVTILCT-GS----QGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNT-IS-V--S-----R------T-IN-----QLY-RAG----AEVIHG-P--LND-I-HTSGHGGQEEQKLMLRLIK--PKFFMPIHGEYRMQKMHVKLAT-DCGIP---EENCFIMDNGEVLALKGDEASVAGKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPD----LISRGFV------DLINDAQELISNHL-QKVM------WSEIKNEITDTLAPFLYEKTKRRPMILPIIMEV
35	HHSearch	83.91	42%	-92	* C1 *	3BK2		RNJ_THET2	A:[14-561]	-----QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF--------------------PEE--G-----M-PG-------VDLLIPR----------VDYL------------IEHRH-KIKAWVLTHGHEDHIGGLPFLL-----PM--IFGKESPVPIYGARLTLGLLRGKLEEFGLR--------P----------------GAF-N---------LKE----------ISPDDRIQV-GRYFTLDLFRMTHSIPDNSG---VVIRT--P--IGTIVHTGDFKL------DPTPIDGKVSHLAKV----AQAGAEGVLLLIADATNAERPGY--------TP--SEM-EIAKELDRVI-GR---A---PGRVFVTTFASHIHRIQSVIWAAEKYG-----R--------K-------VAMEGRSMLKFSRI---ALE-L-GYLKV--------------K---------D--------RLY-------T---L-E---EVKD-L-PDHQVLILAT-GS----QGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNE-EA-V--N-----R------V-IN-----RLY-ALG----AYVLYP-P--TYK-V-HASGHASQEELKLILNLTT--PRFFLPWHGEVRHQMNFKWLAE-SMSRP---PEKTLIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVITALAGEDP-----VVE----VVSRGFVKAG--ERLLGEVRRMALEAL-KNGVR-EKKPLERIRDDIYYPVKKFLKKATGRDPMILPVVIE-
5	PsiBlast_PDB	83.81	41%	-92	- C1 -	3BK2		RNJ_THET2	A:[14-561]	-----QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF--------------------PEE--G-----M-PG-------VDLLIPR----------VDYL------------IEHRH-KIKAWVLTHGHEDHIGGLPFLLPMIFGKE--S-----PVPIYGARLTLGLLRGKLEEFGL---------R----------------PGAFN---------LKE----------ISPDDRIQVGR-YFTLDLFRMTHSIPDNSG---VVIRT--P--IGTIVHTGDFKL------DPTPIDGKVSHLAKV----AQAGAEGVLLLIADATNAERPGY--------TP--SEM-EIAKELDRVI-GR---A---PGRVFVTTFASHIHRIQSVIWAAEKYG-----R--------K-------VAMEGRSMLKFSRI---ALE-L-GYLKV------------------------KD-------RLY-------T---L-E---EVKD-L-PDHQVLILAT-GS----QGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNE-EA-V--N-----R------V-IN-----RLY-ALG----AYVLYP-P--TYK-V-HASGHASQEELKLILNLTT--PRFFLPWHGEVRHQMNFKWLAE-SMSRP---PEKTLIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVIT---------ALAGEDPVVEVVSRGFVKAGE--RLLGEVRRMALEALKNGVREKKPLE--RIRDDIYYPVKKFLKKATGRDPMILPVVIE-
4	PsiBlast_PDB	83.21	41%	-90	- C1 -	3BK1		RNJ_THET2	A:[14-561]	-----QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF--------------------PEE--G-----M-PG-------VDLLIPR----------VDYL------------IEHRH-KIKAWVLTHGHEDHIGGLPFLLPMIFGKE--S-----PVPIYGARLTLGLLRGKLEEFGL---------R----------------PGAFN---------LKE----------ISPDDRIQVGR-YFTLDLFRMTHSIPDNSG---VVIRT--P--IGTIVHTGDFKL------DPTPIDGKVSHLAKV----AQAGAEGVLLLIADATNAERPGY--------TP--SEM-EIAKELDRVI-GR---A---PGRVFVTTFASHIHRIQSVIWAAEKYG-----R--------K-------VAMEGRSMLKFSRI---ALE-L-GYLKV------------------------KD-------RLY-------T---L-E---EVKD-L-PDHQVLILAT-GS----QGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNE-EA-V--N-----R------V-IN-----RLY-ALG----AYVLYP-P--TYK-V-HASGHASQEELKLILNLTT--PRFFLPWHGEVRHQMNFKWLAE-SMSRP---PEKTLIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVIT---------ALAGEDPVVEVVSRGFVKAGE--RLLGEVRRMALEALKNGVREKKPLE--RIRDDIYYPVKKFLKKATGRDPMILPVVIE-
3	PsiBlast_PDB	82.74	42%	-95	- C1 -	3T3O		RNJ_THET2	A:[15-562]	-----QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF--------------------PEE--G-----M-PG-------VDLLIPR----------VDYL------------IEHRH-KIKAWVLTHGAEDHIGGLPFLLPMIFGKE--S-----PVPIYGARLTLGLLRGKLEEFGL---------R----------------PGAFN---------LKE----------ISPDDRIQVGR-YFTLDLFRMTHSIPDNSG---VVIRT--P--IGTIVHTGDFKL------DPTPIDGKVSHLAKV----AQAGAEGVLLLIADATNAERPGY--------TP--SEM-EIAKELDRVI-GR---A---PGRVFVTTFASHIHRIQSVIWAAEKYG-----R--------K-------VAMEGRSMLKFSRI---ALE-L-GYLKV------------------------KD-------RLY-------T---L-E---EVKD-L-PDHQVLILAT-GS----QGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNE-EA-V--N-----R------V-IN-----RLY-ALG----AYVLYP-P--TYK-V-HASGHASQEELKLILNLTT--PRFFLPWHGEVRHQMNFKWLAE-SMSRP---PEKTLIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVIT---------ALAGEDPVVEVVSRGFVKAGE--RLLGEVRRMALEALKNGVREKKPLE--RIRDDIYYPVKKFLKKATGRDPMILPVVIE-
2	PsiBlast_PDB	82.51	42%	-96	- C1 -	3T3N		RNJ_THET2	A:[15-562]	-----QDHVEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF--------------------PEE--G-----M-PG-------VDLLIPR----------VDYL------------IEHRH-KIKAWVLTHGAEDHIGGLPFLLPMIFGKE--S-----PVPIYGARLTLGLLRGKLEEFGL---------R----------------PGAFN---------LKE----------ISPDDRIQVGR-YFTLDLFRMTHSIPDNSG---VVIRT--P--IGTIVHTGDFKL------DPTPIDGKVSHLAKV----AQAGAEGVLLLIADATNAERPGY--------TP--SEM-EIAKELDRVI-GR---A---PGRVFVTTFASHIHRIQSVIWAAEKYG-----R--------K-------VAMEGRSMLKFSRI---ALE-L-GYLKV------------------------KD-------RLY-------T---L-E---EVKD-L-PDHQVLILAT-GS----QGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNE-EA-V--N-----R------V-IN-----RLY-ALG----AYVLYP-P--TYK-V-HASGHASQEELKLILNLTT--PRFFLPWHGEVRHQMNFKWLAE-SMSRP---PEKTLIGENGAVYRLTRETFEKVGEVPHGVLYVDGLGVGDITEEILADRRHMAEEGLVVIT---------ALAGEDPVVEVVSRGFVKAGE--RLLGEVRRMALEALKNGVREKKPLE--RIRDDIYYPVKKFLKKATGRDPMILPVVIE-
25	PsiBlast_CBE	76.62	40%	-94	- C1 -	5A0T		?	B:[21-452]	----------VTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLF--------------------PEE--E-----Q-PG-------IDLILPD----------FTSI------------RDRLD-DIEGIVLTHGHEDHIGGVPFLL-----REK-P-----DIPLIGSKLTLALIEAKLQEHRI---------R----------------PYTLE---------VAE----------GHRERVGPF-----DCEFVAVNHSIPDALA---VAIRT--P--AGMVVHTGDFKM------DQLPLDGRLTDLHAF----ARLSEEGIDLLLADSTNAEVPGF--------VP--PER-DISNVLRQVF-AN---A---RKRIIVASFASHVHRIQQILDAAHEYG-----R--------R-------VAFVGRSMVRNMGI---ARD-L-GYLKV--------------P---------PG-------LVV-------D---V-K---TLDD-L-PDSEVVLVCT-GS----QGEPMAALSRMANRDH-QIRIVNGDTVILASSLIPGNE-NA-V--Y-----R------V-IN-----GLT-RWG----ANVVHK-G--NAK-V-HVSGHASAGELLYFYNICR--PKNLMPVHGEWRHLRANAELGA-LTGVP---HDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVD---------------------------------------------------------------------------------------------------------------------
24	PsiBlast_CBE	76.34	40%	-94	- C1 -	5A0V		?	B:[21-452]	----------VTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLF--------------------PEE--E-----Q-PG-------IDLILPD----------FTSI------------RDRLD-DIEGIVLTHGHEDHIGGVPFLL-----REK-P-----DIPLIGSKLTLALIEAKLQEHRI---------R----------------PYTLE---------VAE----------GHRERVGPF-----DCEFVAVNHSIPDALA---VAIRT--P--AGMVVHTGDFKM------DQLPLDGRLTDLHAF----ARLSEEGIDLLLADSTNAEVPGF--------VP--PER-DISNVLRQVF-AN---A---RKRIIVASFASHVHRIQQILDAAHEYG-----R--------R-------VAFVGRSMVRNMGI---ARD-L-GYLKV--------------P---------PG-------LVV-------D---V-K---TLDD-L-PDSEVVLVCT-GS----QGEPMAALSRMANRDH-QIRIVNGDTVILASSLIPGNE-NA-V--Y-----R------V-IN-----GLT-RWG----ANVVHK-G--NAK-V-HVSGHASAGELLYFYNICR--PKNLMPVHGEWRHLRANAELGA-LTGVP---HDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVD---------------------------------------------------------------------------------------------------------------------
6	PsiBlast_PDB	75.51	40%	-93	- C1 -	5A0T		?	A:[21-455]	----------VTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLF--------------------PEE--E-----Q-PG-------IDLILPD----------FTSI------------RDRLD-DIEGIVLTHGHEDHIGGVPFLL-----REK-P-----DIPLIGSKLTLALIEAKLQEHRI---------R----------------PYTLE---------VAE----------GHRERVGPF-----DCEFVAVNHSIPDALA---VAIRT--P--AGMVVHTGDFKM------DQLPLDGRLTDLHAF----ARLSEEGIDLLLADSTNAEVPGF--------VP--PER-DISNVLRQVF-AN---A---RKRIIVASFASHVHRIQQILDAAHEYG-----R--------R-------VAFVGRSMVRNMGI---ARD-L-GYLKV--------------P---------PG-------LVV-------D---V-K---TLDD-L-PDSEVVLVCT-GS----QGEPMAALSRMANRDH-QIRIVNGDTVILASSLIPGNE-NA-V--Y-----R------V-IN-----GLT-RWG----ANVVHK-G--NAK-V-HVSGHASAGELLYFYNICR--PKNLMPVHGEWRHLRANAELGA-LTGVP---HDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVDGLS------------------------------------------------------------------------------------------------------------------
7	PsiBlast_PDB	75.31	40%	-92	- C1 -	5A0V		?	A:[21-455]	----------VTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLF--------------------PEE--E-----Q-PG-------IDLILPD----------FTSI------------RDRLD-DIEGIVLTHGHEDHIGGVPFLL-----REK-P-----DIPLIGSKLTLALIEAKLQEHRI---------R----------------PYTLE---------VAE----------GHRERVGPF-----DCEFVAVNHSIPDALA---VAIRT--P--AGMVVHTGDFKM------DQLPLDGRLTDLHAF----ARLSEEGIDLLLADSTNAEVPGF--------VP--PER-DISNVLRQVF-AN---A---RKRIIVASFASHVHRIQQILDAAHEYG-----R--------R-------VAFVGRSMVRNMGI---ARD-L-GYLKV--------------P---------PG-------LVV-------D---V-K---TLDD-L-PDSEVVLVCT-GS----QGEPMAALSRMANRDH-QIRIVNGDTVILASSLIPGNE-NA-V--Y-----R------V-IN-----GLT-RWG----ANVVHK-G--NAK-V-HVSGHASAGELLYFYNICR--PKNLMPVHGEWRHLRANAELGA-LTGVP---HDRIVIAEDGVVVDLVEGKAKITGKVQAGYVYVDGLS------------------------------------------------------------------------------------------------------------------