@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1090: (2016-03-21 )
LEPLVSVIIPVYNVEKYVKRCLDSVLEQTYHNLEVIVVNDGATDNSAKVIKSISDNRIRYFEKENGGQATARNFGLDVATGDYIVMVDSDDYISKNLVETCLDTVQKTNADLVLFTSYNVNQEGKMQYIKRDKGIKVLDAGPTPWNKFYQADLWKGSRFPVGYWYEDLGIIPVVTLKAKNPVKIQDALYYYITDRADSQSNIQQVDHFLDVVIMLENVETELKKLGIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKFPNWGSYPYQAGGKLTATLKKKALWLYLHHLYLLGDLVWKYPFSIRSKQTGF

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10..-.-.-....20.......--.30--..--......40.....-----...50.-.--.--.-----.--...-60------------.--------.-....---------.---------..70........80------........90..-......100......-.110.......120..----------------...-------.----.----130...-.-------------------.-------.----------...140..-.....150..-.--.-...160.--.--......----------170----------.....-...----180........190.......200.......-210.......220..---------.---....230.......240.......250.......260.......270.......280.......290......-.300-........-----------------310....---...320.....---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEPLVSVIIPVYN-V-E-KYVKRCLDSVLEQ--TYH--NL--EVIVVNDGATDNS-----AKVIKS-I--S--D-----N--RIR-Y-------------F--------E-KENG---------G---------QATARNFGLDVATG------DYIVMVDSDDYI-SKNLVETCLDTVQKT-NADLVLFTSYNVNQEG----------------KMQ-------Y----I----K--RDK-G-------------------I-------K----------VLDAGPTP-WNKFYQADLW-K--G-SRFPV-G--Y--WYEDLG----------II-----------PVVTL-KAK----N-PVKIQDALYYYITDRADSQSNIQQVDHFL-DVVIMLENVETELKK---------L---GIYEESKDQLAYLYIEHLIYRLVLRKAIYITNKQERKKLIKKISTIIQEKFPNWGSYPYQAGGKLTATLKKKA-LWL--YLHHLYLL-----------------GDLVWKY---PFSIRSKQTGF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 Fugue 81.0725% -87 - C2 -2Z86 CHS_ECOLX A:[4-625] IDIDAATKIMCSNAKAISLNEVEKNEIISKYREITAKKSERAELKEVEPIPLDWPSDLTLPPLPESTNDYVWAGKRKELLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPESVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPQLLQQKVPYFYRKKEKIESATLKRVPLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-HYAN--H-----P--RVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------N--------------------------L-------------------I-------S----------NGYNWPIY-SREKLTSAMI-C--H-H----------------------------F-----------RMFTA-RAW----N-LTEGFN----------ESISNAVDYDMYL-KLSEVG--------------------------------------PFKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKY-TWE--KI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 71.8921% -64 - C2 -2D7I GLT10_HUMAN A:[35-570] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQKLKDWHDKEAIRRDAQRVGNGEQGRPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLPDIRHPNCNSKRYLETLPNTSIIIPFHN-EGW-SSLLRTVHSVLNR--SPP--ELVAEIVLVDDFSDREHLK---KPLEDY-M--A--LF----P--SVR-I-------------L--------RTKKRE---------G---------LIRTRMLGASVATG------DVITFLDSHCEA-NVNWLPPLLDRIARN-RKTIVCPMIDVIDHD-----------------DFR-------Y----E----T--QAG-D---------------------------------------AMRGAFD-WEMYYKRIPI-P--P-EL-----------QKADP----------SD-----------PFESP-VMA----G-GLFAVDRKWFWELGGYDPGLEIW-----------GGEQYEISFKV---------WMCGG----RMEDIPCSRVGH-IYR-------------------------------KYVPYKVPAGVSLARNLKRVAEVWMDEYAEYIYQR-----------------RPEYRHL---SAGDVAVQKKLRSSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLEGCVRGRGEAAWNNMQVFTFTWREDIRPGDPQHTKKFCFDAISHTSPVTLYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRIFMNTCNPSSLTQQWLFEHTNSTVLEKFNRN
22 PsiBlast_CBE 71.6937%-133 - C2 -2Z86 CHS_ECOLX C:[375-501] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-H--Y--A-----NHPRVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------NL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 71.2537%-128 - C2 -2Z86 CHS_ECOLX D:[375-510] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-H--Y--A-----NHPRVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------NL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 69.6837%-134 - C2 -2Z86 CHS_ECOLX A:[375-505] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-H--Y--A-----NHPRVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------NL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 68.9237%-127 - C2 -2Z87 CHS_ECOLX A:[374-504] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-H--Y--A-----NHPRVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------NL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 68.8137%-121 - C2 -2Z87 CHS_ECOLX B:[374-502] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-H--Y--A-----NHPRVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------NL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 67.9837%-127 - C2 -2Z86 CHS_ECOLX B:[375-502] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLVSIYIPAYN-C-S-KYIVRCVESALNQ--TIT--DL--EVCICDDGSTDDT-----LRILQE-H--Y--A-----NHPRVR-F-------------I--------S-QKNK---------G---------IGSASNTAVRLCRG------FYIGQLDSDDFL-EPDAVELCLDEFRKDLSLACVYTTNRNIDREG----------------NL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 Fugue 67.5319% -94 - C2 -1QG8 SPSA_BACSU A:[1-255] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVSVIMTSYN-K-S-DYVAKSISSILSQ--TFS--DF--ELFIMDDNSNEET-----LNVIRP-F--LN-D-----N--RVR-F-------------Y--------Q-SDISGVKERTEKTR---------YAALINQAIEMAEG------EYITYATDDNIY-MPDRLLKMVRELDTH-PEKAVIYSASKTYHLN----------------------------------------------------------------------------------------------------------------------------------------------------DIVKE-TVR----P-AAQVTWNAPCAIDHCS---------------VMHRYSVLEKVKEK---------F---GSYWDESPAFYRIGDARFFWRVNHFYPF----YPLDEELDLNYITEFVRNLP-----PQRNCRELRESLKKLG-MG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 66.6117% -50 - C2 -1FO8 MGAT1_RABIT A:[1-343] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAVIPILVIACD---R-STVRRCLDKLLHYRPSAE--LF--PIIVSQDCGHEET-----AQVIAS-Y--G--S-----A--VTH-IRQPDLSNIAVQPDH--------R-KFQG---------Y---------YKIARHYRWALGQIFHNFNYPAAVVVEDDLEV-APDFFEYFQATYPLL-KADPSLWCVSAWNDNG----------------KEQ-------M----V----D--SSK-P-------------------E-------L----------LYRTDFFPGLGWLLLAELW-AELE-PKWPK-A--F--WDDWMRRPEQRKGRACVR-----------PEISR-TMT----F-GLKFIKLNQQFVPFTQLDLSYLQQEAYDR-DFLARVYG-APQLQV---------E---KVRTNDRKELGEVRVQY-------------TGRDSFKAFAKALG--VMDDLKS-GVPRAGYRGIVTFLFRGRR-VHL--APPQTWDG-----------------YDPSWT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 HHSearch 65.9419% -74 - C2 -2D7I GLT10_HUMAN A:[111-341] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPNTSIIIPFHN-E-GWSSLLRTVHSVLNR--SPPELVA--EIVLVDDFSDREHL----KKPLED-Y--MALF-----P--SVRIL-------------R--------T-KKRE---------G---------LIRTRMLGASVATG------DVITFLDSHCEA-NVNWLPPLLDRIARN-RKTIVCPMIDVIDHDD----------------FRYETQAGDAM----R----G--AFD-WEMYYKRIPIPPELQKADPSD-------P----------FESPVMAG-GLFAVDRKWFWE--L-GGYDP-GL-EIWGGEQYE----------IS-----------FKVWM-CGG----R-MEDIPCSRVGHIYRK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 65.4728%-115 - C2 -2D7I GLT10_HUMAN A:[112-230] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNTSIIIPFHN-E-GWSSLLRTVHSVLNR--SPP--ELVAEIVLVDDFSDREH-----LK--KP-L--E--DYMALFP--SVR-I-------------L--------RTKKRE---------G---------LIRTRMLGASVATG------DVITFLDSHCEA-NVNWLPPLLDRIARN-RKTIVC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 Fugue 60.4412% -82 - C2 -1XHB GALT1_MOUSE A:[8-466] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEA-W-STLLRTVHSVINR--SPR--HMIEEIVLVDDASERDFLKRPLESYVKK-L--K--V-----P--VHV-I-------------R--------M-EQRS---------G---------LIRARLKGAAVSRG------QVITFLDAHCEC-TAGWLEPLLARIKHD-RRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLN-------F----R----W--YPV-P-------------------Q-------R----------EMDRRKGD-RTLPVRTPTM-A--G-GLFSIDR--D--YFQEIG----------TYDAGMDIWGGENLEISF-RIWQCGGT-LEIVTCSHVGHVFGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRL---GLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTAN-KEI--RTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCTGSRSQQWLLRNV--------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 57.7429%-107 - C2 -1QGQ SPSA_BACSU A:[1-116] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVSVIMTSYN-K-S-DYVAKSISSILSQ--TFS--DF--ELFIMDDNSNEET-----LNVIRPFL--N--D-----N--RVR-F-------------Y--------Q-SDIS---------GVKERTEKTRYAALINQAIEMAEG------EYITYATDDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 57.1929%-104 - C2 -1H7L SPSA_BACSU A:[1-115] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVSVIMTSYN-K-S-DYVAKSISSILSQ--TFS--DF--ELFIMDDNSNEET-----LNVIRPFL--N--D-----N--RVR-F-------------Y--------Q-SDIS---------GVKERTEKTRYAALINQAIEMAEG------EYITYATDDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 57.1629%-101 - C2 -1H7Q SPSA_BACSU A:[1-114] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVSVIMTSYN-K-S-DYVAKSISSILSQ--TFS--DF--ELFIMDDNSNEET-----LNVIRPFL--N--D-----N--RVR-F-------------Y--------Q-SDIS---------GVKERTEKTRYAALINQAIEMAEG------EYITYATDDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 56.9729%-111 - C2 -1QGS SPSA_BACSU A:[1-116] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVSVIMTSYN-K-S-DYVAKSISSILSQ--TFS--DF--ELFIMDDNSNEET-----LNVIRPFL--N--D-----N--RVR-F-------------Y--------Q-SDIS---------GVKERTEKTRYAALINQAIEMAEG------EYITYATDDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 56.9229%-106 - C2 -1QG8 - SPSA_BACSU A:[1-116] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKVSVIMTSYN-K-S-DYVAKSISSILSQ--TFS--DF--ELFIMDDNSNEET-----LNVIRPFL--N--D-----N--RVR-F-------------Y--------Q-SDIS---------GVKERTEKTRYAALINQAIEMAEG------EYITYATDDN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 HHSearch 56.7017% -86 * C2 *3CKJ GPGS_MYCPA A:[46-267] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGRTISVVLPALD-E-E-DTIGSVIDSISPL--VDGL-VD--ELIVLDSGSTDDT-----EIRAVA-A--G------------AR-V-------------VSREQALPEV-PIRP---------G---------KGEALWRSLAASRG------DIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRP-------------------------------GRVTELVARP--LLA-ALRP----------------E-------L----------GCILQPLG-GEYAATRELL-T--S-VPFAP-G-----YGVEIG----------LL-----------VDTFDRLGL----DAIAQVNLGVREHRNRP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 56.5432% -51 - C2 -3BCV - ? A:[3-218] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIPKVSVIVPIYN-V-E-KYLDQCVQALLAQ--TLS--DI--EIILIDDESPDNC-----PKICDD-Y--AAQY-----P--NIK-V-------------I--------H-KKNA---------G---------LGMACNSGLDVATG------EYVAFCDSDDYV-DSDMYMTMYNVAQKY-TCDAVFT----------------------------------------------FKLYKNK-------------------NEIHTLLKDLIASDPYAREERAIQVSA-KVVLYRRNLIEK--KHLRFVS-ERIL--PSEDLI----------FN-----------VDVLA-NSN----I-VCVLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------