@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo1091: (2016-03-21 )
LHKLSVVIAVYNVSEYIEACLTSVLEQNYKNVELIIVNDGSTDDTFQKVEKLVDGHTNVILIDQENQGVSAVRNNGVKAATGDYLGFVDGDDIIAKDMFQKMMDSFEMSDADMVTIGVARLSGDKVYPSTLHERYMVEKKEATTIEETPALLYDTTSWNKVFKKSFWDKHHLEFPEGQMYEDIALMIPAFLYAEKVNIIPDVGYYWRSREGGAKSITQRRNDIAMVNDRLLALKKVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAPKDYYLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKKITK
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........-----10.-.-.-.....20-.........30-.--........40....-.-...50.---......--.60.-..--------.-....---------70........80........90..-.-.....100------....----...-.-110.....---..120...-----------....130-----------....--....--.-------140.------.-.----..--------..150.......160-.........170....-----.-..---180.........190....-....200...---....210.......220.......230..--.....240...-----....250.......260.......270.-......280---........290...------....300........----310.......320.......330.....---------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LH
K
L
S
V
V
I
A
-----VY
N
-
V
-
S
-
E
Y
I
E
A
C
--
L
T
S
V
L
E
QNYK--
N
--
V
E
L
I
I
V
NDGST
D
D
T
-
F
-
Q
K
V
E
K
L
---VDGHT
N
--
V
I
L
I
-DQ--------E-NQ
G
V
---------
S
A
V
RNNGVKAATG
D
Y
L
GFVDG
D
D
I
-
I
-
A
K
D
M
F
Q
K
-------
M
M
D
S----FEM-S-DA
D
M
V
T
I
G
---
V
A
RLSGDK-----------V
Y
P
S
T
-------------
L
H
E
R
--
Y
M
V
E--K-------KEAT------T-I----EE--------TP
A
L
L
Y
DTT
S
W
N
K
---
V
F
K
K
S
F
W
D
KHHLEFPE-----G-
Q
M
---
Y
--
E
D
I
A
L
M
I
P
A
F
-
L
Y
A
E
K
-VNIIPDVG
Y
Y
---WRSREG
G
A
K
S
I
T
Q
RRN
D
I
A
M
V
N
D
R
L
L
A
L
K
--
K
V
N
Q
V
L
N
EKNI-----Q
G
D
L
R
YQNERK
N
F
E
I
D
L
F
S
M
I
E
W
A
FLAP-
K
D
Y
Y
L
A
L
Q
----
P
L
I
K
N
Y
V
E
Q
E
M
K
T
T
------
A
LNDI
P
-
K
E
K
K
R
L
F
K
----
A
L
LANNR
P
A
F
L
L
N
S
Y
I
Y
F
G
K
K
A
V
K
K
ITK---------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
83.84
20%
-81
- C1 -
2Z86
4
CHS_ECOLX
A:
[4-625]
IDID
A
A
T
K
I
M
C
S
N
A
KA
I
S
L
N
E
V
E
K
N
E
I
I
S
K
Y
R
E
I
T
A
K
K
S
E
R
A
E
L
K
EVEPIPLDWPSDLTLPPLPESTND
Y
V
W
A
G
K
RKELLIID
G
L
S
I
V
I
P
T
YNR
A
K
I
L
A
I
T
L
A
C
L
C
N
QKTI
Y
D
Y
E
V
I
V
A
D
DGSKEN
I
E
E
I
V
R
E
F
E
SLLN
I
K
Y
V
R
Q
K
D
YGYQ
L
C
A
V
R
N
L
G
L
R
A
AKYN
Y
V
A
I
L
D
CD
M
A
P
N
PL
W
V
Q
S
Y
M
E
L
L
A
V
DDN
V
A
L
I
G
P
R
K
Y
I
D
TSKHT
Y
L
D
F
L
S
Q
KSLINEIPESVDWR
I
E
H
F
K
N
T
D
NLRLCNTPFRFFSGG
N
V
A
F
A
K
K
W
L
F
R
A
GWFDEEFTHWGG
E
D
N
E
F
G
Y
R
L
Y
R
E
G
C
Y
F
R
S
V
EGA
M
A
Y
H
Q
E
P
PQLLQQKVPYFYRKKEKIESATLKR
V
P
L
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
R
K
D
L
-
S
L
A
C
V
Y
T
T
---
N
R
N
I
D
R
E
G
-----------
N
L
I
S
N
-------------
G
Y
N
W
--
P
I
Y
S
--
R
-------
E
K
L
T
------
S
-
A
----
M
I
--------
C
H
H
F
--------
R
---
M
F
T
A
R
A
W
N
L
T
E
G
F
N
E
S
-----
I
-
S
N
---
A
--
V
D
Y
D
M
Y
L
K
L
S
-
E
V
G
-
P
-
F
K
H
I
N
K
I
C
Y
N
---
R
V
L
H
-----------------------------------------------------------------------------------------------
S
I
K
------
K
L
D
I
Q
K
-
E
N
H
F
K
V
V
N
----
E
S
L
S
R
L
G
I
K
K
Y
K
Y
S
P
L
T
N
L
N
E
C
R
K
Y
T
W
E
K
I-------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
73.40
15%
-74
- C1 -
2D7I
6
GLT10_HUMAN
A:
[35-570]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQKLKDWHD
K
E
A
I
R
R
D
A
Q
RVGNGEQGRPYPMTDAERVDQAYRENGFN
I
Y
V
S
D
K
ISLN
R
S
L
P
DIRH
P
N
C
N
S
KRYLE
T
L
P
N
T
S
I
I
I
P
-----
F
H
N
-
E
G
W
-
S
S
L
L
R
T
--
V
H
S
V
L
N
R
S
P
P
--
E
LV
A
E
I
V
L
V
D
D
F
S
D
R
E
H
-
L
K
K
P
L
E
D
Y
---
M
A
L
F
P
S
--
V
R
I
L
R
T
K
--------
K
-
R
E
G
L
---------
I
R
T
R
M
L
G
A
S
V
A
T
G
D
V
I
T
F
L
D
S
H
C
E
-
A
-
N
V
N
W
L
P
P
-------
L
L
D
R
----
I
A
R
-
N
-
R
K
T
I
V
C
P
M
---
I
D
V
I
D
H
D
D
-----------
F
--------------------
R
--
Y
E
T
Q
--
A
-------
G
D
-------------------------
A
M
R
G
A
F
D
---
W
E
M
---
Y
Y
K
R
I
P
I
P
P
E
L
Q
K
A
D
P
-----
S
-
D
P
---
F
--
E
--
S
P
V
M
A
G
G
-
L
F
A
V
D
-
R
K
W
F
W
E
L
G
G
Y
DPG
L
E
I
W
G
G
E
Q
Y
E
I
S
F
K
---
V
W
M
C
G
G
R
M
E
D
I
P
C
S
R
V
G
H
I
Y
R
K
Y
V
P
-----
Y
K
V
P
A
G
V
S
L
A
R
N
L
K
R
V
A
E
V
W
M
D
----
E
Y
-
A
E
Y
I
Y
Q
R
R
----
P
E
Y
R
H
L
S
A
G
D
---------------
V
-
A
V
Q
K
K
L
R
S
----
S
L
N
C
K
S
F
K
W
F
M
T
K
I
A
W
D
L
P
K
F
Y
P
P
V
E
P
P
AAAW
G
E
I
R
N
VGTG
L
C
A
D
T
KHGALGSPL
R
L
E
G
C
VRGRGEAAWNNMQ
V
F
T
FTWRE
D
I
R
P
G
DPQHTKKFCFDAISHT
S
P
V
T
LYDCHSMKGNQ
L
W
K
Y
R
KDKTLYHPVSG
S
C
M
D
C
S
ESD
H
R
I
F
M
N
TCNPSSLTQ
Q
W
L
F
EHTN
S
T
V
L
E
KFNRN
40
HHSearch
70.72
15%
-86
- C1 -
2D7I
5
GLT10_HUMAN
A:
[111-342]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
P
N
T
S
I
I
I
P
-----
F
H
N
-
E
-
G
W
S
S
L
L
R
T
--
V
H
S
V
L
N
R
S
P
P
EL
V
--
A
E
I
V
L
V
D
D
F
S
D
R
E
H
L
K
-
K
P
L
E
D
Y
---
M
A
L
F
P
S
--
V
R
I
L
-
R
T
--------
K
K
R
E
G
L
---------
I
R
T
R
M
L
G
A
S
V
A
T
G
D
V
I
T
F
L
D
S
H
C
E
-
A
-
N
V
N
W
L
P
P
-------
L
L
D
R
----
I
A
R
-
N
-
R
K
T
I
V
C
P
M
---
I
D
V
I
D
H
D
D
-----------
F
R
Y
E
T
QAGD---------
A
M
R
G
--
A
F
D
W
--
E
-------
M
Y
Y
K
R
I
P
IPP
E
-
L
QKAD
P
S
--------
D
P
F
E
S
P
V
M
A
G
G
L
F
---
A
V
D
R
K
W
F
W
E
L
G
G
-
Y
D
P
-----
G
-
L
E
IWG
G
--
E
Q
Y
E
I
S
F
K
V
W
-
M
C
G
G
R
-
M
E
D
I
P
C
S
R
V
G
---
H
I
Y
R
K
Y
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
Fugue
69.42
17%
-34
- C1 -
4MND
4
DIPPS_ARCFU
A:
[40-457]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
M
K
A
V
I
L
A
A
G
LGGG
V
P
K
-
P
-
L
-
V
R
V
G
G
C
E
I
I
L
R
T
M
K
L
L
S
P
--
H
--
V
S
E
F
I
I
V
A
S
R
Y
A
D
D
-
I
-
D
A
F
L
K
D
---
K
G
F
N
Y
K
--
I
V
R
H
-
D
R
--------
P
-
E
K
G
----------
N
G
Y
S
L
L
V
A
K
N
H
V
E
D
R
F
I
L
T
M
G
D
H
V
-
Y
-
S
Q
Q
F
I
E
K
A
V
R
GE
G
V
I
A
D
R
EPRF
V
D
I
-
G
-
E
A
T
K
I
R
V
E
DGR
V
A
K
I
G
K
D
L
REFDCVDTG
F
F
V
L
D
D
S
-------------
I
F
E
H
--
A
E
K
L
--
R
DRE
E
I
P
L
S
E
I
V
------
K
-
L
----
A
R
--------
L
P
V
T
Y
V
D
G
E
L
W
M
D
---
V
D
T
K
E
D
V
R
R
A
N
R
A
L
V
S
A
A
VGD
G
-
F
I
---
S
--
R
K
I
N
R
K
I
S
T
R
-
I
S
A
A
I
-
V
N
K
V
N
P
N
Q
M
T
---
L
I
S
F
L
V
G
A
F
S
A
L
A
S
F
F
S
I
P
L
A
G
L
L
Y
Q
F
S
S
--
I
L
D
G
C
D
G
E
I
A
R
A
S
LKM
S
K
K
G
G
Y
V
D
S
I
L
D
R
F
V
D
F
L
F
L
A
I
I
A
L
L
Y
P
-
K
T
A
T
V
A
M
F
A
I
F
G
S
V
M
V
S
Y
T
S
E
K
Y
K
A
E
FGESIR
V
L
N
Y
I
P
G
K
R
D
E
R
I
F
L
I
M
I
F
C
L
L
S
A
I
S
L
Q
W
I
F
W
M
F
L
F
V
A
A
I
S
L
T
R
V
V
V
T
L
L
A
V
L
V
S-------------------------------------------------------------------------------------------------------------------------------------------
27
Fugue
67.42
18%
-59
- C1 -
1QG8
2
SPSA_BACSU
A:
[1-255]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
K
V
S
V
I
M
T
-----
S
Y
N
-
K
-
S
-
D
Y
V
A
K
S
--
I
S
S
I
L
S
Q
T
F
S
--
D
--
F
E
L
F
I
M
D
D
N
S
N
E
E
T
-
L
-
N
V
I
R
P
F
---
L
N
D
N
R
V
--
R
F
Y
Q
-
S
D
ISG
V
K
E
R
T
E
-
K
T
R
Y
---------
A
A
L
I
N
Q
A
I
E
M
A
E
G
E
Y
I
T
Y
A
T
D
D
N
I
-
Y
-
M
P
D
R
L
L
K
-------
M
V
R
E
----
L
D
T
-
H
-
P
E
K
A
V
I
Y
S
---
A
S
K
T
Y
H
L
N
-----------
D
I
V
K
E
-------------
T
V
R
P
--
A
A
Q
V
--
T
-------
W
N
A
P
------
C
-
A
----
I
D
--------
H
C
S
V
M
H
R
Y
S
V
L
E
K
---
V
K
E
K
F
--
G
S
Y
W
D
E
S
P
A
-----
F
-
Y
R
---
I
--
G
D
A
R
F
F
W
R
V
---------------------------------------------------------------------------------------------
N
H
F
-
Y
P
F
Y
P
L
D
E
----
E
L
D
L
N
Y
I
T
E
F
V
R
N
L
------
P
P
Q
R
N
C
-
R
E
L
R
E
S
L
K
----
K
L
G
M
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
67.38
35%
-122
- C1 -
2Z86
2
CHS_ECOLX
C:
[377-479]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
67.33
35%
-115
- C1 -
2Z87
2
CHS_ECOLX
B:
[376-480]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
67.26
35%
-123
- C1 -
2Z86
2
CHS_ECOLX
A:
[377-483]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
66.16
35%
-116
- C1 -
2Z86
2
CHS_ECOLX
D:
[377-488]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
65.88
35%
-118
- C1 -
2Z86
2
CHS_ECOLX
B:
[377-480]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
65.83
35%
-122
- C1 -
2Z87
2
CHS_ECOLX
A:
[376-482]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
S
I
Y
I
P
-----
A
Y
N
-
C
-
S
-
K
Y
I
V
R
C
--
V
E
S
A
L
N
Q
T
I
T
--
D
--
L
E
V
C
I
C
D
D
G
S
T
D
D
T
-
L
-
R
I
L
Q
E
H
---
Y
A
N
H
P
R
--
V
R
F
I
-
S
Q
--------
K
-
N
K
G
I
---------
G
S
A
S
N
T
A
V
R
L
C
R
G
F
Y
I
G
Q
L
D
S
D
D
F
-
L
-
E
P
D
A
V
E
L
-------
C
L
D
E
----
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
63.65
11%
-64
- C1 -
1XHB
4
GALT1_MOUSE
A:
[8-466]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N
R
S
L
P
DVRL
E
G
C
K
T
K
V
Y
P
D
N
L
P
T
T
S
V
V
I
V
-----
F
H
N
E
A
-
W
-
S
T
L
L
R
T
--
V
H
S
V
I
N
R
S
P
R
--
H
MI
E
E
I
V
L
V
D
D
A
S
E
R
D
F
-
L
K
R
P
L
E
S
Y
---
V
K
K
L
K
V
P
V
H
V
I
R
-
M
E
--------
Q
-
R
S
G
L
---------
I
R
A
R
L
K
G
A
A
V
S
R
G
Q
V
I
T
F
L
D
A
H
C
E
-
C
-
T
A
G
W
L
E
P
-------
L
L
A
R
----
I
K
H
-
D
-
R
R
T
V
V
C
P
I
---
I
D
V
I
S
D
D
T
-----------
F
E
Y
M
A
G
S
DM
T
Y
G
G
F
N
WKL
N
F
R
W
--
Y
P
V
P
--
Q
-------
R
E
M
D
------
R
-
R
----
K
G
--------
D
R
T
L
P
V
R
T
P
T
M
A
G
G
L
F
S
I
D
R
D
Y
F
Q
E
I
G
T
Y
D
A
G
-----
M
-
D
I
---
W
GG
E
N
L
E
I
S
F
R
I
W
-
Q
C
G
G
T
-
L
E
I
V
T
C
S
H
V
G
---
H
V
F
G
--
Q
I
I
N
K
N
N
R
R
L
A
E
V
W
M
D
E
F
K
N
F
F
Y
--
I
I
S
P
G
V
T
K
V
D
Y
-----
G
D
I
S
S
R
L
G
L
R
R
K
L
Q
---
C
K
P
F
S
W
Y
L
E
N
I
Y
P
D
S
Q
I
P
R
H
----
Y
F
S
L
G
E
I
R
N
V
E
T
N
Q
------
C
L
D
N
M
A
-
R
K
E
N
E
K
V
G
----
I
F
N
C
H
G
M
G
G
--
N
Q
V
F
S
Y
T
A
N
K
E
I
R
T
D
D
L
C
L
D
V
S
K
LN
G
P
V
T
M
L
KCHHLKGNQ
L
W
E
Y
D
PVKLTLQHVNSN
Q
C
L
D
K
A
TEEDSQ
V
P
S
I
R
DCTGSRSQQWLLRNV---------------------------------------------------------------------------
5
PsiBlast_PDB
63.14
26%
-124
- C1 -
1QGQ
2
SPSA_BACSU
A:
[2-127]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
S
V
I
M
T
-----
S
Y
N
-
K
-
S
-
D
Y
V
A
K
S
--
I
S
S
I
L
S
Q
T
F
S
--
D
--
F
E
L
F
I
M
D
D
N
S
N
E
E
T
-
L
-
N
V
I
R
P
F
---
L
N
D
N
-
R
--
V
R
F
Y
-
Q
S
--------
D
-
I
S
G
V
K
E
R
T
EKT
R
Y
A
A
L
I
N
Q
A
I
E
M
A
E
G
E
Y
I
T
Y
A
T
D
D
N
I
-
Y
-
M
P
D
R
L
L
K
-------
M
V
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
62.46
26%
-129
- C1 -
1QGS
2
SPSA_BACSU
A:
[2-127]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
S
V
I
M
T
-----
S
Y
N
-
K
-
S
-
D
Y
V
A
K
S
--
I
S
S
I
L
S
Q
T
F
S
--
D
--
F
E
L
F
I
M
D
D
N
S
N
E
E
T
-
L
-
N
V
I
R
P
F
---
L
N
D
N
-
R
--
V
R
F
Y
-
Q
S
--------
D
-
I
S
G
V
K
E
R
T
EKT
R
Y
A
A
L
I
N
Q
A
I
E
M
A
E
G
E
Y
I
T
Y
A
T
D
D
N
I
-
Y
-
M
P
D
R
L
L
K
-------
M
V
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
62.43
26%
-124
- C1 -
1QG8
-
SPSA_BACSU
A:
[2-127]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
S
V
I
M
T
-----
S
Y
N
-
K
-
S
-
D
Y
V
A
K
S
--
I
S
S
I
L
S
Q
T
F
S
--
D
--
F
E
L
F
I
M
D
D
N
S
N
E
E
T
-
L
-
N
V
I
R
P
F
---
L
N
D
N
-
R
--
V
R
F
Y
-
Q
S
--------
D
-
I
S
G
V
K
E
R
T
EKT
R
Y
A
A
L
I
N
Q
A
I
E
M
A
E
G
E
Y
I
T
Y
A
T
D
D
N
I
-
Y
-
M
P
D
R
L
L
K
-------
M
V
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
61.92
26%
-123
- C1 -
1H7L
2
SPSA_BACSU
A:
[2-126]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
S
V
I
M
T
-----
S
Y
N
-
K
-
S
-
D
Y
V
A
K
S
--
I
S
S
I
L
S
Q
T
F
S
--
D
--
F
E
L
F
I
M
D
D
N
S
N
E
E
T
-
L
-
N
V
I
R
P
F
---
L
N
D
N
-
R
--
V
R
F
Y
-
Q
S
--------
D
-
I
S
G
V
K
E
R
T
EKT
R
Y
A
A
L
I
N
Q
A
I
E
M
A
E
G
E
Y
I
T
Y
A
T
D
D
N
I
-
Y
-
M
P
D
R
L
L
K
-------
M
V
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
61.82
26%
-121
- C1 -
1H7Q
2
SPSA_BACSU
A:
[2-125]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
S
V
I
M
T
-----
S
Y
N
-
K
-
S
-
D
Y
V
A
K
S
--
I
S
S
I
L
S
Q
T
F
S
--
D
--
F
E
L
F
I
M
D
D
N
S
N
E
E
T
-
L
-
N
V
I
R
P
F
---
L
N
D
N
-
R
--
V
R
F
Y
-
Q
S
--------
D
-
I
S
G
V
K
E
R
T
EKT
R
Y
A
A
L
I
N
Q
A
I
E
M
A
E
G
E
Y
I
T
Y
A
T
D
D
N
I
-
Y
-
M
P
D
R
L
L
K
-------
M
V
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
HHSearch
61.52
17%
-79
* C1 *
3CKJ
5
GPGS_MYCPA
A:
[47-265]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
R
T
I
S
V
V
L
P
-----
A
L
D
-
E
-
E
-
D
T
I
G
S
V
--
I
D
S
I
S
P
L
V
D
G
L-
V
--
D
E
L
I
V
L
D
S
G
S
T
D
D
T
-
E
-
I
R
A
V
A
A
---
G
-------
A
R
V
V
-
S
R
EQALPE
V
P
I
-
R
P
G
K
---------
G
E
A
L
W
R
S
L
A
A
S
R
G
D
I
V
V
F
V
D
S
D
L
I
-
N
P
H
P
M
F
V
P
W
-------
L
V
G
P
----
L
L
T
-
G
D
G
V
H
L
V
K
S
F
---
Y
R
R
P
-----------------------------------
G
R
--
V
T
E
L
V
A
R
-------
P
L
L
A
------
A
-
L
----
R
P
--------
E
L
G
C
I
L
Q
P
L
G
G
E
Y
---
A
A
T
R
E
L
L
T
S
V
P
--
F
A
P
-----
G
-
Y
----
G
--
V
E
I
G
L
L
V
D
T
F
D
R
L
G
L
D
A
I
A
Q
V
N
L
G
V
R
E
---
H
R
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
60.93
24%
-51
- C1 -
3BCV
-
?
A:
[4-218]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
P
K
V
S
V
I
V
P
-----
I
Y
N
-
V
-
E
-
K
Y
L
D
Q
C
--
V
Q
A
L
L
A
Q
T
L
S
--
D
--
I
E
I
I
L
I
D
D
E
S
P
D
N
C
-
P
-
K
I
C
D
D
Y
---
A
A
Q
Y
P
N
--
I
K
V
I
-
H
K
--------
K
-
N
A
G
L
---------
G
M
A
C
N
S
G
L
D
V
A
T
G
E
Y
V
A
F
C
D
S
D
D
Y
-
V
-
D
S
D
M
Y
M
T
-------
M
Y
N
V
----
A
Q
K
-
Y
-
T
C
D
A
V
F
T
---------------------------------------------FK
L
Y
K
N
--
K
-------
N
E
I
H
------
T
L
L
----
K
D
LIASD
P
Y
A
R
E
E
R
A
I
Q
V
S
A
K
V
V
---
L
Y
R
R
N
L
I
E
K
K
H
L
R
F
V
S
-----
E
R
I
L
P--
S
--
E
D
L
I
F
N
V
D
V
L
-
A
N
S
N
I
-
V
C
V
L
P
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
Fugue
60.62
14%
-47
- C1 -
3CKJ
5
GPGS_MYCPA
A:
[15-329]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLRDTRPG
D
T
W
L
ADR
S
W
N
R
P
GWT
V
A
E
L
E
A
A
KA
G
R
T
I
S
V
V
L
P
-----
A
L
D
-
E
-
E
-
D
T
I
G
S
V
--
I
D
S
I
S
P
L
V
D
G
L-
V
--
D
E
L
I
V
L
D
S
G
S
T
D
D
T
-
E
-
I
R
A
V
A
A
G
A
R
V
V
S
R
E
Q
--
A
L
P
E
-
V
P
--------
I
-
R
P
G
K
---------
G
E
A
L
W
R
S
L
A
A
S
R
G
D
I
V
V
F
V
D
S
D
L
I
N
P
-
H
P
M
F
V
P
W
-------
L
V
G
P
----
L
L
T
-
G
-
D
G
V
H
L
-
V
K
---
S
F
Y
R
R
P
G
R
-----------
V
T
E
L
V
-------------
A
R
P
L
--
L
A
A
L
--
R
-------
P
E
L
G
------
C
-
I
----
L
Q
--------
P
L
G
G
E
-------
Y
---
A
A
T
R
E
L
L
T
S
V
P
F
----------------
A
--
P
G
Y
G
V
E
I
G
L
L
-
V
D
T
F
D
-
R
L
--------------------------------
G
L
D
A
I
A
Q
V
--
N
L
G
V
--
R
E
H
R
N
-----
R
P
L
A
E
L
G
A
M
S
R
Q
V
I
A
T
L
L
S
R
C
G
I
P
D
S
G
V
-
G
L
T
Q
F
V
A
D
----
G
P
E
G
Q
S
Y
T
Q
H
T
W
P
V
------
S
L
A
D
R
P
--------------
P
M
Q
A
I
R
P
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------