@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1171: (2016-03-22 )
MQKVSFKTDLYIGQGATDRLLDFKDKQIFIVTDPFMVSSGMINAITDKIDQSNTYTIFSEIIPDPPIENVVAGIEVLNECDANLMIAIGGGSAIDAAKAMKFFGQKLGTVRAMPFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDADLVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGNDLEAREKMHNASCLAGMAFNITSLGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAGITSDFGNNPDNRAAERYTAIAKLLKMPASNTRLGVRSLINAIKQLQKKLNMPTTLTECGISRTDLNENIAQIAEGALNDGCTATNPRTPTETDVSAILEKMLA

Atome Classification :

(21 SA) .........10........20..---..------....----30.....--...40........50.-..-.-.....60........70........80........90........100---------.....------....-------------110----------..-----------......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280--.........290.......--300....--.--....--310.......320.......330.......340.......350.......360.......370.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MQKVSFKTDLYIGQGATDRLLDF---KD------KQIF----IVTDPFM--VSSGMINAITDKID-Q-SN-T-YTIFSEIIPDPPIENVVAGIEVLNECDANLMIAIGGGSAIDAAKAM-----------KFFGQ------KLGT-------------VR-----------AM-----------PFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDADLVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGNDLEAREKMHNASCLAGMAFNITSLGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAGITSD----FGNNPDNRAAERYTAIAKL--L--KMPA--S--NTRL--GVRSLINAIKQLQKKLNMPTTLTECGISRTDLNENIAQIAEGALNDGCTATNPRTPTETDVSAILEKMLA
60 HHSearch 95.6634% -92 - C3 -1RRM FUCO_ECOLI A:[4-384] -NRMILNETAWFGRGAVGALTDEVKRRGY-----QKAL----IVTDKTL--VQCGVVAKVTDKMD-AAGL-A-WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAI-----------GIISN------NPEFADVRSLEGLSPTNKP-----------SV-----------PILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVAG--DKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADF---------------TGEKYRDIARV--M--GVKVEGM--SLEE--ARNAAVEAVFALNRDVGIPPHLRDVGVRKE----DIPALAQAALDDVCTGGNPREATLEDIVELYHTAWE
59 HHSearch 92.9833% -98 * C3 *3OX4 ADH2_ZYMMO A:[5-383] --TFYIPFVNEMGEGSLEKAIKDLNGSGF-----KNAL----IVSDAFM--NKSGVVKQVADLLK-AQGI-N-SAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAI-----------ALVAT------NGGEVKDYEGIDKSK--KP-----------AL-----------PLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASV---------------VAGRLKDVGVA--M--GLDI--ANLGDKE--GAEATIQAVRDLAASIGIPANLTELGAKKE----DVPLLADHALKDACALTNPRQGDQKEVEELFLSAF-
61 HHSearch 90.8534% -94 - C3 -3BFJ DHAT_KLEPN A:[7-387] --DYLVPNVNFFGPNAISVVGERCQLLGG-----KKAL----LVTDKGL--RKDGAVDKTLHYLR-EAGI-E-VAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGI-----------GIAAT------HEGDLYQYAGIETLT--NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYNLIA---------------NPEKFADIAEL--M--GENITGL--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKET----DFPYMAEMALKDGNAFSNPRKGNEQEIAAIFRQAF-
44 PsiBlast_CBE 88.9333% -93 - C3 -3BFJ DHAT_KLEPN E:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
43 PsiBlast_CBE 88.7133% -92 - C3 -3BFJ DHAT_KLEPN F:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
4 PsiBlast_PDB 88.5633% -90 - C3 -2BL4 FUCO_ECOLI A:[22-384] ----------WFGRGAVGALTDE---VK------RRGYQKALIVTDKTL--VQCGVVAKVTDKMD-A-AGLA-WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAI-----------GIISNNP----EFAD-------------VR-----------SLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVA--GDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTG---------------EKYRDIARV--M--GVKV--E--GMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRK----EDIPALAQAALDDVCTGGNPREATLEDI---------
46 PsiBlast_CBE 88.5433% -91 - C3 -3BFJ DHAT_KLEPN C:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
27 PsiBlast_CBE 88.2833% -90 - C3 -2BL4 FUCO_ECOLI B:[22-384] ----------WFGRGAVGALTDE---VK------RRGYQKALIVTDKTL--VQCGVVAKVTDKMD-A-AGLA-WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAI-----------GIISNNP----EFAD-------------VR-----------SLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVA--GDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTG---------------EKYRDIARV--M--GVKV--E--GMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRK----EDIPALAQAALDDVCTGGNPREATLEDI---------
3 PsiBlast_PDB 88.1733% -91 - C3 -2BI4 FUCO_ECOLI A:[22-384] ----------WFGRGAVGALTDE---VK------RRGYQKALIVTDKTL--VQCGVVAKVTDKMD-A-AGLA-WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAI-----------GIISNNP----EFAD-------------VR-----------SLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVA--GDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTG---------------EKYRDIARV--M--GVKV--E--GMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRK----EDIPALAQAALDDVCTGGNPREATLEDI---------
28 PsiBlast_CBE 87.9533% -90 - C3 -2BI4 FUCO_ECOLI B:[22-384] ----------WFGRGAVGALTDE---VK------RRGYQKALIVTDKTL--VQCGVVAKVTDKMD-A-AGLA-WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAI-----------GIISNNP----EFAD-------------VR-----------SLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVA--GDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTG---------------EKYRDIARV--M--GVKV--E--GMSLEEARNAAVEAVFALNRDVGIPPHLRDVGVRK----EDIPALAQAALDDVCTGGNPREATLEDI---------
5 PsiBlast_PDB 87.9233% -86 - C3 -1RRM FUCO_ECOLI A:[13-375] ----------WFGRGAVGALTDE---VK------RRGYQKALIVTDKTL--VQCGVVAKVTDKMD-A-AGLA-WAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAI-----------GIISNNP----EFAD-------------VR-----------SLEGLSPTNKPSVPILAIPTTAGTAAEVTINYVITDEEKRRKFVCVDPHDIPQVAFIDADMMDGMPPALKAATGVDALTHAIEGYITRGAWALTDALHIKAIEIIAGALRGSVA--GDKDAGEEMALGQYVAGMGFSNVGLGLVHGMAHPLGAFYNTPHGVANAILLPHVMRYNADFTG---------------EKYRDIARVMGV--KVEG--M--SLEE--ARNAAVEAVFALNRDVGIPPHLRDVGVRK----EDIPALAQAALDDVCTGGNPREATLEDI---------
47 PsiBlast_CBE 87.8833% -89 - C3 -3BFJ DHAT_KLEPN B:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
29 PsiBlast_CBE 87.7833% -92 - C3 -3BFJ DHAT_KLEPN T:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
6 PsiBlast_PDB 87.7633% -92 - C3 -3BFJ DHAT_KLEPN A:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
45 PsiBlast_CBE 87.3233% -91 - C3 -3BFJ DHAT_KLEPN D:[26-385] -----------------ERCQLL---GG------KKAL----LVTDKGLR--KDGAVDKTLHYLR-E-AG-IEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEGDLYQYAGI------ETLT-------------NP-----------LP-----------PIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGMAFNNANLGYVHAMAHQLGGLYDMPHGVANAVLLPHVARYN----------LIANP-----EKFADIAEL--MGENITG--L--STLD--AAEKAIAAITRLSMDIGIPQHLRDLGVKETDF----PYMAEMALKDGNAFSNPRKGNEQEIAAIFRQ---
1 PsiBlast_PDB 87.0533% -87 - C3 -3OWO ADH2_ZYMMO A:[14-379] -----------MGEGSLEKAI-----KDLNGSGFKNAL----IVSDAFM--NKSGVVKQVADLLKAQ-GI-N-SAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAI-----------ALVAT------NGGE-------------VKDYEGIDKSKKPAL-----------PLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVA------GRLKD-------VGVAMG--L--DIAN--L--GDKE--GAEATIQAVRDLAASIGIPANLTELGAKK----EDVPLLADHALKDACALTNPRQGDQKEVEELF-----
26 PsiBlast_CBE 87.0233% -84 - C3 -3OWO ADH2_ZYMMO B:[14-379] -----------MGEGSLEKAI-----KDLNGSGFKNAL----IVSDAFM--NKSGVVKQVADLLKAQ-GI-N-SAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAI-----------ALVAT------NGGE-------------VKDYEGIDKSKKPAL-----------PLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVA------GRLKD-------VGVAMG--L--DIAN--L--GDKE--GAEATIQAVRDLAASIGIPANLTELGAKK----EDVPLLADHALKDACALTNPRQGDQKEVEELF-----
24 PsiBlast_CBE 86.5733% -86 - C3 -3OWO ADH2_ZYMMO D:[14-379] -----------MGEGSLEKAI-----KDLNGSGFKNAL----IVSDAFM--NKSGVVKQVADLLKAQ-GI-N-SAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAI-----------ALVAT------NGGE-------------VKDYEGIDKSKKPAL-----------PLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVA------GRLKD-------VGVAMG--L--DIAN--L--GDKE--GAEATIQAVRDLAASIGIPANLTELGAKK----EDVPLLADHALKDACALTNPRQGDQKEVEELF-----
7 PsiBlast_PDB 86.5031% -95 - C3 -4FR2 ? A:[45-396] ----------------------------------KKPV----IVTDKFLENLKNGAVAQTLASLK-K-SG-VDYVVYNGVEPNPKIHNIKEVKTLYEKEDADSIITVGGGSAHDTGKGA-----------GIIMTNGDDITKLAG-------------IE-----------TLKNPLP------PLIAVNTTAGTGSELTRHAVITNEETHLKFVVVSWRNIPLVSFNDPTLMLDIPKGLTAATGMDAFVQAVEPYVSVDHNPITDSQCIQAIKLIESSLREAVANGHNLQARTKMVEAEMLAGMAFNNANLGYVHAMAHQLGGQYDAPHGVCCALLLPYAEEYN--LIAD-------------PERFAELARI--MGENTDG--L--STRD--AAELSIKAMKQLSEDVGIPHSIKDIGAKPEDFD----LMAENALKDGNAFSNPRKGTKEDIVKIFQE---
2 PsiBlast_PDB 86.4933% -86 - C3 -3OX4 ADH2_ZYMMO A:[14-379] -----------MGEGSLEKAI-----KDLNGSGFKNAL----IVSDAFM--NKSGVVKQVADLLKAQ-GI-N-SAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAI-----------ALVAT------NGGE-------------VKDYEGIDKSKKPAL-----------PLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVNDPLLMVGMPKGLTAATGMDALTHAFEAYSSTAATPITDACALKAASMIAKNLKTACDNGKDMPAREAMAYAQFLAGMAFNNASLGYVHAMAHQLGGYYNLPHGVCNAVLLPHVLAYNASVVA------GRLKD-------VGVAMG--L--DIAN--L--GDKE--GAEATIQAVRDLAASIGIPANLTELGAKK----EDVPLLADHALKDACALTNPRQGDQKEVEELF-----
13 PsiBlast_PDB 40.1330% -65 - C3 -3W5S ? A:[131-329] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PQIVIPTTY-AGSEVTP--ILGQTENGVKTTLRGPEILPEVVIYDAELTLGLPVGISMTSGLNAMAHAAEALYARDRNPIASMMAVEGLRAMIEALPGVRMEPQDTKARETALYGAWLCGTVLGAVGMSLHHKLCHTLGGSLDLPHAETHAVLLPYTIAYVEQAVPDQLAPLAALVGGRAGTGLYDFAAR--L--GAPA--S--LAAL--GV--------------------------------------------------------------------