@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1228: (2016-03-22 )
IANTVILVDQPTLEKMKQTYLPFSNPKLPPGAVFAAKKPGVSITGYKSRKVMFQGVNGEAEAKKWVATLPESKAKAPSVSKGILPANFASKNVIGSDEVGTGDFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLVPHSVLLCPNPKYNELQKRGMNQGQMKALLHNRAIENVLKKLAPIKPEAILIDQFAEKNTYYRYLAKEPSIIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVAAEIIERFGLETLAKYTKQHFANTEKALKMVKK

Atome Classification :

(20 SA) .........10........20..-......30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150........160.......170.......180.......190.--......200-------..-..-..-.210.....-..------220.......230.......240.......250.......260.......270.......280--..----...-.--...290.......300......---
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) IANTVILVDQPTLEKMKQTYLPF-SNPKLPPGAVFAAKKPGVSITGYKSRKVMFQGVNGEAEAKKWVATLPESKAKAPSVSKGILPANFASKNVIGSDEVGTGDFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLV-PHSVLLCPNPKYNELQKRGMNQGQMKALLHNRAIENVLKKLAP--IKPEAILID-------QF-AE-KN-TYYRYLAKE-PS------IIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVAAEII----ER----FGL-E--TLAKYTKQHFANTEKALKMVKK---
23 HHSearch 99.5249% -92 - C4 -2D0B ? A:[2-307] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAK----
45 Fugue 99.4648% -92 - C4 -2D0B ? A:[2-309] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAKRR--
2 PsiBlast_PDB 99.3248% -92 - C4 -2D0B ? A:[2-308] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAKR---
44 Fugue 99.2348% -95 - C4 -3ASM - ? A:[2-309] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFAGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAKRR--
1 PsiBlast_PDB 99.1248% -91 - C4 -2D0A - ? A:[2-308] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAKR---
4 PsiBlast_PDB 99.1048% -94 - C4 -3ASM - ? A:[2-308] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFAGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAKR---
3 PsiBlast_PDB 98.0448% -91 - C4 -2D0C ? A:[2-308] -SNYVIQADQQLLDALRAHYEGA-LSDRLPAGALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAKWISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETV-PHAVTVLDNPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAP--AEPEAIIID-------EF-LK-RD-SYFRYLSDE-DR------IIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARII----RA----RGE-E--MLETCAKLHFANTKKALAIAKR---
24 HHSearch 73.9328% -81 - C4 -3VN5 - RNH3_AQUAE A:[2-256] ---PSLKISPSEAEKIQNYLVSSGFRKINAPYTLWALEGNGVKVYYYKTGSLLIQGKNSEKVLKEVLN-------------------LLEKKKLPGCDESGKGDIFGSLVLCCVCIPEENYLKVSSLNPRDTKRLSDKRVERLYLALKPLV-KAYCYEIKPEEYNKLYRKFRNLNKMMTHFYKLLIERVKEEC-----GVSEVVVD-------KY-QP-SN-P------------------FGEDVIFETEAE-RNLAVAVASIFARYKFLQSLKEVERELGIKIPKGTSKEVKELAKSLK----N-------------PERFIKLNFN--------------
6 PsiBlast_PDB 73.7726% -82 - C4 -4PY5 ? A:[27-266] -----------------------------PEHAQYRLRLNDAILTVYKSGSVVYGG-KGREKLKELVAETVLSDTELPR---------------IGCNEAGKGEFVGPLVVACIVADEKCLKRLIELGVKDSKKLSNEKVEELASEITETC-HGKVKLLIPEKYNRAYSKFKNINRLLEAVYREIVSDLCEKFS-----PKVVVVD-------KF-S---N-RAEEVLKDV-VK------GARLEV--RPKAED-DLAVAAASIVAKAVRLKTMKELEKRFKVKLPEG-----NTGLAELL----KK----TPK-E--LHEKLFKLHFS--------------
5 PsiBlast_PDB 71.3328% -88 - C4 -3VN5 - RNH3_AQUAE A:[29-250] ------------------------------PYTLWALEGNGVKVYYYKTGSLLIQGKNSEKVLKEVLNLLEKKK----------LP---------GCDESGKGDIFGSLVLCCVCIPEENYLKVSSLNPRDTKRLSDKRVERLYLALKPLV-KAYCYEIKPEEYNKLYRKFRNLNKMMTHFYKLLIERVKEECG-----VSEVVVD-------KY-QP-SN-PF------------------GEDVIFETEAER-NLAVAVASIFARYKFLQSLKEVERELGIKIPKGTSKEVKELAKSLKNP--ER----F-------------------------------
27 HHSearch 64.1522% -71 - C4 -1I39 - RNH2_ARCFU A:[1-200] --------------------------------------------------------------------------------------------MKAGIDEAGKGCVIGPLVVAGVACSDE--DRLRKLGVKDSKKLSQGRREELAEEIRKIC-RTEVLKVSPENLDERMA-AKTINEILKECYAEIILRLK---------PEIAYVD-------SP-DVIPE-RLSRELEEI-T---------GLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVL----KE----WIASG--RIPSCVRMRWKTVSNLRQK------
26 HHSearch 64.0323% -82 - C4 -1IO2 - RNH2_THEKO A:[1-209] -------------------------------------------------------------------------------------------MKIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVLDDYVILELPPDVIGSR---EGTLNEFEVENFAKALNSLKV-------KPDVIYAD-------AA-DVDEE-RFARELGER-LN-------FEAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYG---EIGSGYPSDPRTRAFLENYYRE----HG-----EFPPIVRKGWKTLKKIAEKVE----
28 HHSearch 63.1923% -67 - C4 -1UAX - RNH2_PYRHO A:[1-207] -------------------------------------------------------------------------------------------MKVAGVDEAGRGPVIGPLVIGVAVIDEKNIERLRDIGVKDSKQLTPGQREKLFSKLIDILDDYYVLLVTPKEIDERH---HSMNELEAEKFVVALNSLRI-------KPQKIYVD-------SA-DVDPK-RFASLIKAG-LK-------YEATVIAEHKADAKYEIVSAASIIAKVTRDREIEKLKQKYG---EFGSGYPSDPRTKEWL----EEYYKQYG-----DFPPIVRRTWETARKIEER------
46 Fugue 63.1723% -83 * C4 *1IO2 - RNH2_THEKO A:[1-213] -------------------------------------------------------------------------------------------MKIAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVL-DDYVILELPPDVIGSR--EGTLNEFEVENFAKALNSL--KVKP-----DVIYADAADVDEERF-AR-EL-GERLNF--------------EAEVVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYGEI---GSGYPSDPRTRAFL----EN----YYR-EHGEFPPIVRKGWKTLKKIAEKVESEKK
25 HHSearch 62.6724% -75 - C4 -1EKE RNH2_METJA A:[1-224] -------------------------------------------------------------------------------------------MIIIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVK---ELTKNKRAYLKKLLENLG-YVEKRILEAEEINQLMN-SINLNDIEINAFSKVAKNLIEKLNIR-DDEIEIYID-------AC-ST-NTKKFEDSFKDK-IEDIIKERNLNIKIIAEHKADAKYPVVSAASIIAKAERDEIIDYYKKIYG---DIGSGYPSDPKTIKFL----ED----YFK-KHKKLPDIARTHWKTCKRILDKSKQ---
7 PsiBlast_PDB 62.6626% -81 - C4 -1UAX - RNH2_PYRHO A:[3-183] ---------------------------------------------------------------------------------------------VAGVDEAGRGPVIGPLVIGVAVIDEKNIERLRDIGVKDSKQLTPGQREKLFSKLIDIL-DDYYVLLVTPK--EIDERHHSMNELEAEKFVVAL-NSLR------IKPQKIYVD-------SA-DV-DP-KRFASLIKA-GL------KYEATVIAEHKADAKYEIVSAASIIAKVTRDREIEKLKQKYG---EFGSGYPSDPRTKEWL----EE----Y-------------------------------
16 PsiBlast_PDB 62.3326% -85 - C4 -1I39 - RNH2_ARCFU A:[4-177] -----------------------------------------------------------------------------------------------GIDEAGKGCVIGPLVVAGVACSDE--DRLRKLGVKDSKKLSQGRREELAEEIRKIC-RTEVLKVSPENLDER----MAAKTINEILKECYAEIILR------LKPEIAYVD-------S-----PD-VIPERLSRELEE------ITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVL----KE----W-------------------------------
17 PsiBlast_PDB 61.4526% -78 - C4 -1I3A RNH2_ARCFU A:[24-197] -----------------------------------------------------------------------------------------------GIDEAGKGCVIGPLVVAGVACSDE--DRLRKLGVKDSKKLSQGRREELAEEIRKIC-RTEVLKVSPENLDER----MAAKTINEILKECYAEIILR------LKPEIAYVD-------S-----PD-VIPERLSRELEE------ITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVL----KE----W-------------------------------
14 PsiBlast_PDB 61.0626% -82 - C4 -3P83 - RNH2_ARCFU D:[4-177] -----------------------------------------------------------------------------------------------GIDEAGKGCVIGPLVVAGVACSDE--DRLRKLGVKDSKKLSQGRREELAEEIRKIC-RTEVLKVSPENLDER----MAAKTINEILKECYAEIILR------LKPEIAYVD-------S-----PD-VIPERLSRELEE------ITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVL----KE----W-------------------------------
10 PsiBlast_PDB 60.6027% -98 - C4 -2DFE - RNH2_THEKO A:[3-164] ---------------------------------------------------------------------------------------------IAGIDEAGRGPVIGPMVIAAVVVDENSLPKLEELKVRDSKKLTPKRREKLFNEILGVL-DDYVILELPPDV---------IGSREGTLNEFEVENFAKALNSLKVKPDVIYAD-------AADVD-EE-RFARELGER-LN------FEAE-VVAKHKADDIFPVVSAASILAKVTRDRAVEKLKEEYG-------------------------------------------------------------