@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1322: (2016-03-23 )
MSTELLDALHVLEHDKGISREVLVEAIEAALTSAYKRNFKDAQNVRVDLNMENGSIRVLARKEAVEQVFDSRLEISMEEAHKLNPVYQPGDVVELEVTPKDFGRIAAQTAKQVVTQRVREAERGIIYDEFIDREDDIMTGIVERQDSRFIYVNLGKIEAILSQNEQMPNETYHAHDRIKVYLTKVEKTTKGPQIFVSRTHPGLLKRLFEMEVPEIYDGVVEIKSVAREAGDRSKISVYTANEEVDPVGACVGPKGARVQTIVNELKGEKIDIVEWSEDPFTFVANALSPSKVLDVIVNEADQATTVIVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETVATELGIYPRNGVEAPEVEEAESETFTEDEE

Atome Classification :

(20 SA) ----------------------------------.........10.......-.20........30........40........-50........60........70........80.........90.......-.100.......110.......120.......130.......140.....----.-----.150..---.----...---.160.-....------.----------------.--170-.....-..180.......190------.........200.---......210.......220.......230-.--------------......240-------------........250.......260.......--270.......280....---...290....----------....-300.......310.......320.......330.......340.......350.......360.......370
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------MSTELLDALHVLEHDKGI-SREVLVEAIEAALTSAYKRNFKDAQNVRVDL-NMENGSIRVLARKEAVEQVFDSRLEISMEEA-HKLNPVYQPGDVVELEVT-PKDFGRIAAQTAKQVVTQRVREAERGIIYDEFIDREDDIMTGIVERQDS----R-----FIYVNL---G----KIE---AILSQ-NEQM------P----------------N--ETY-HAHDR-IKVYLTKVEKTTK--------GPQIFVSRTHPGL---LKRLFEMEVPEIYDGVVEIKSVAREAGDR-S--------------KISVYTAN--------------EEVDPVGACVGPKGARVQTIVNELKGEK--IDIVEWSEDPFTFVANA---LSPSK-VLDV----------IVNE-ADQATTVIVPDYQLSLAIGKRGQNARLAAKLTGWKIDIKSETVATELGIYPRNGVEAPEVEEAESETFTEDEE
21 HHSearch 92.4147% -73 - C6 -1HH2 - ? P:[1-341] ----------------------------------MNIGLLEALDQLEEEKGI-SKEEVIPILEKALVSAYRKNFGNSKNVEVVI-DRNTGNIKVYQLLEVVEEVEDPATQISLEEA-KKIDPLAEVGSIVKKELN-VKNFGRIAAQTAKQVLIQRIRELEKEKQFEKYSELKGTVTTAEVIRVMG----E-----WADIRI---G----KLE---TRLPK-KEWI------P----------------G--EEI-KAGDL-VKVYIIDVVKTTK--------GPKILVSRRVPEF---VIGLMKLEIPEVENGIVEIKAIAREPGVR-T--------------KVAVASND--------------PNVDPIGACIGEGGSRIAAILKELKGEK--LDVLKWSDDPKQLIANA---LAPAT-VIEV----------EILDKENKAARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIKPI--------------------------------
43 Fugue 91.5446% -73 - C6 -1HH2 - ? P:[1-344] ----------------------------------MNIGLLEALDQLEEEKGI-SKEEVIPILEKALVSAYRKNFGNSKNVEVVI-DRNTGNIKVYQLLEVVEEVEDPATQISLEEA-KKIDPLAEVGSIVKKELN-VKNFGRIAAQTAKQVLIQRIRELEKEKQFEKYSELKGTVTTAEVIRVMG----E-----WADIRI---G----KLE---TRLPK-KEWI------P----------------G--EEI-KAGDL-VKVYIIDVVKTTK--------GPKILVSRRVPEF---VIGLMKLEIPEVENGIVEIKAIAREPGVR-T--------------KVAVASND--------------PNVDPIGACIGEGGSRIAAILKELKGEK--LDVLKWSDDPKQLIANA---LAPAT-VIEVE---------ILDK-ENKAARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIKPIMNL-----------------------------
1 PsiBlast_PDB 91.2947% -75 - C6 -1HH2 - ? P:[1-339] ----------------------------------MNIGLLEALDQLEEEKGI-SKEEVIPILEKALVSAYRKNFGNSKNVEVVI-DRNTGNIKVYQLLEVVEEVEDPATQISLEEA-KKIDPLAEVGSIVKKELN-VKNFGRIAAQTAKQVLIQRIRELEKEKQFEKYSELKGTVTTAEVIRVMG----E-----WADIRI---G----KLE---TRLPK-KEWI------P----------------G--EEI-KAGDL-VKVYIIDVVKTTK--------GPKILVSRRVPEF---VIGLMKLEIPEVENGIVEIKAIAREPGVR-T--------------KVAVASND--------------PNVDPIGACIGEGGSRIAAILKELKGEK--LDVLKWSDDPKQLIANA---LAPAT-VIEVE---------ILDK-ENKAARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIK----------------------------------
3 PsiBlast_PDB 83.5439% -92 - C6 -4MTN ? A:[11-314] --------------------------------------IVDSIH---RDKSI-DKEIVFEGVEQAILSAARKHFGEEEVIEVHI-DRTSGQPMVKTNGR----------EIDRDEL----------GDI----------LGRISAQT-KQVMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEG----S-----AITVNI---G----KAE---AILPR-SEMI------P----------------G--ESH-RPNER-IRAVVLEVKKMGP--------RVRVVLSRAHPDF---VRRLLELEIPEVNERIIEIRSLAREAGYR-T--------------KVAVSCAD--------------SNIDPVGACVGVRGARIRNVGEELGGER--IEVVRWNDSLQVLVPNA---MQPSE-VEDV----------ILCP-MLGRVLVLVRDDQLSLAIGKRGQNVRLASKLVGWDIDVMT---------------------------------
20 PsiBlast_CBE 79.6848% -84 - C6 -2ATW NUSA_MYCTU C:[2-223] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSTREGEIVAGVIQR-DS----RANARGLVVVRI---GTETKASE---GVIPA-AEQV------P----------------G--ESY-EHGNR-LRCYVVGVTRGAR--------EPLITLSRTHPNL---VRKLFSLEVPEIADGSVEIVAVAREAGHR-S--------------KIAVRSNV--------------AGLNAKGACIGPMGQRVRNVMSELSGEK--IDIIDYDDDPARFVANA---LSPAK-VVSVS---------VIDQ-TARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDA-------------------------------
23 HHSearch 78.0449% -80 - C6 -2ASB NUSA_MYCTU A:[4-229] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------STREGEIVAGVIQRDSRANARG-----LVVVRI---GTETKASE---GVIPA-AEQV------P----------------G--ESY-EHGNR-LRCYVVGVTRGAR--------EPLITLSRTHPNL---VRKLFSLEVPEIADGSVEIVAVAREAGHR-S--------------KIAVRSNV--------------AGLNAKGACIGPMGQRVRNVMSELSGEK--IDIIDYDDDPARFVANA---LSPAK-VVSV----------SVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPG-------------------------
4 PsiBlast_PDB 77.9948% -82 - C6 -2ASB NUSA_MYCTU A:[4-223] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------STREGEIVAGVIQR-DS----RANARGLVVVRI---GTETKASE---GVIPA-AEQV------P----------------G--ESY-EHGNR-LRCYVVGVTRGAR--------EPLITLSRTHPNL---VRKLFSLEVPEIADGSVEIVAVAREAGHR-S--------------KIAVRSNV--------------AGLNAKGACIGPMGQRVRNVMSELSGEK--IDIIDYDDDPARFVANA---LSPAK-VVSVS---------VIDQ-TARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDA-------------------------------
5 PsiBlast_PDB 76.7648% -79 - C6 -2ATW NUSA_MYCTU A:[3-223] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------FSTREGEIVAGVIQR-DS----RANARGLVVVRI---GTETKASE---GVIPA-AEQV------P----------------G--ESY-EHGNR-LRCYVVGVTRGAR--------EPLITLSRTHPNL---VRKLFSLEVPEIADGSVEIVAVAREAGHR-S--------------KIAVRSNV--------------AGLNAKGACIGPMGQRVRNVMSELSGEK--IDIIDYDDDPARFVANA---LSPAK-VVSVS---------VIDQ-TARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDA-------------------------------
2 PsiBlast_PDB 72.5947% -14 - C6 -1L2F - ? A:[5-339] --------------------------------------LLEALDQLEEEKGI-SKEEVIPILEKALVSAYRKNFGNSKNVEVVI-DRNTGNIKVYQLLEVVEEVEDPATQISLEEA-KKIDPLAEVGSIVKKELN-VKNFGRIAAQTAKQVLIQRIRELEKEKQFEKYSELKGTVTTAEVIRVMG----E-----WADIRI---G----KLE---TRLPK-KEWI------P----------------G--EEI-KAGDL-VKVYIIDVVKTTK--------GPKILVSRRVPEF---VIGLMKLEIPEVENGIVEIKAIAREPGVR-T--------------KVAVASND--------------PNVDPIGACIGEGGSRIAAILKELKGEK--LDVLKWSDDPKQLIANA---LAPAT-VIEVE---------ILDK-ENKAARVLVPPTQLSLAIGKGGQNARLAAKLTGWKIDIK----------------------------------
6 PsiBlast_PDB 51.1234% -39 - C6 -2KWP - NUSA_ECOLI A:[1-126] ----------------------------------MNKEILAVVEAVSNEKAL-PREKIFEALESALATATKKKYEQEIDVRVQI-DRKSGDFDTFRRWLVVDEVTQPTKEITLEAA-RYEDESLNLGDYVEDQIE-SVTFDRITTQTAKQVIVQKVREAERAML-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 50.7334% -40 - C6 -2KWP - NUSA_ECOLI A:[1-128] ----------------------------------MNKEILAVVEAVSNEKAL-PREKIFEALESALATATKKKYEQEIDVRVQI-DRKSGDFDTFRRWLVVDEVTQPTKEITLEAA-RYEDESLNLGDYVEDQIE-SVTFDRITTQTAKQVIVQKVREAERAMLVP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 49.7621% -71 - C6 -2A19 - IF2A_YEAST A:[8-89] --------------------------------------------------------------------------------------------------------------------------------------------------------------------YENKYPEIDDIVMVNVQQIAE----M-----GAYVKL---LEYD-NIE---GMILL-S----------SI--------------Q--KLI-RVGKN-DVAVVLRVDKE----------KGYIDLSKRRV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 43.7820% -42 - C6 -1KL9 IF2A_HUMAN A:[13-90] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------PEVEDVVMVNVRSIAE----M-----GAYVSLLEYN----NIE---GMILL-SEL-------------------------------RIGRN-ECVVVIRVDKE----------KGYIDLSKRRVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39 HHSearch 42.8512% -42 - C6 -1Y14 - RPB7_YEAST B:[78-166] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKPFKGEVVDGTVVSCSQ----H-----GFEVQV---G----PMK---VFVTK-HLMP------QDLTFNASYQSS-----E--DVI-TIKSR-IRVKIEGCISQVS--------SIHAIGSIKED----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 42.5919% -48 - C6 -2K4K - GS13_BACSU A:[6-80] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVGSVYTGKVTGLQA----Y-----GAFVALD--E----ETQ---GLVHI-SEVTHGFVKDI----------------N--EHL-SVGDE-VQVKVLAVDEE----------KGKISLSIRATQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 Fugue 42.0919% 1 - C1 -4L8N ? A:[6-457] NTSICRLGFTYDISQSKNWGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEVSVDEIPQLLNPAGRN------DVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKP----D-----LLIQTF---Y----FFDKNPNYLGA-NEKE------P----------------T--YRYNFSHSKMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPG-----RVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAA-GIRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKY-PQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRP----------TIRSEVTVEIK-
37 HHSearch 41.7715% -13 * C6 *2CQO - NO40_HUMAN A:[13-91] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------PALYTIFQGEVAMVTD----Y-----GAFIKIP--GC---RKQ---GLVHR-THMSSCRVDKP----------------S--EIV-DVGDK-VWVKLIGREMKND--------RIKVSLSMKVVN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 41.6318% -42 - C6 -2K52 - A:[4-73] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPGKFYKGVVTRIEK----Y-----GAFINLN--E----QVR---GLLRP-RDMI------S----------------LRLENL-NVGDE-IIVQAIDVRPE----------KREIDFKYIPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 41.4613% -44 - C6 -2B8K - RPB7_YEAST G:[79-171] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------FKPFKGEVVDGTVVSCSQ----H-----GFEVQV---G----PMK---VFVTK-HLMP------QDLTFNAGSNPPSYQSSE--DVI-TIKSR-IRVKIEGCISQVS--------SIHAIGSIKEDYLGAI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 40.3820% -20 - C6 -1JJG - ? A:[30-100] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSPGSVHEGIVY-FKD----G-----IFKVRL---LGYE-GHE---CILLDYLNYR------QDTLDRL----------K--ERL--VGRV-IKTRVVRADGL------------YVDLRR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------