@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo1401: (2016-03-24 )
MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASGRGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDEAKYLVRPANFPDDTTPGTGMVFVKSNQHEIAVINMQGRTFLADLDDPFRKMDYLIEEAKKRTNIIFVDFHAETTSEKEAMGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKTALPTRFEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD
Atome Classification :
(20 SA)
------------------------------.........10.----------------.......20.......----.30........40.....----.----------..----50......-..60........70.--..--.....80....-.....90---...--.---.-----..-----.100..-----....----.110.......120.---------.--------.---------..--...130.......140..-.......150.....---------.------------.160...-.--...170.......180...---------------.--.----------..190.......200-.-......210.......220--..--...------....230.......240....--...250.......260.....----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------------------
M
K
I
L
F
I
G
D
V
V
G
S----------------I
G
R
D
A
I
T
E
Y
L
P
Q
L
K
K
K----YK
P
T
I
T
V
INGENAASGRG----
I
----------
T
E
----
K
I
Y
K
D
F
L
E
-LGA
N
A
V
T
LGNHTWDN--
R
D
--
I
F
E
F
I
D
-E
A
K
Y
-LVRPANF---PDD--T---T-----PG-----T
G
M
V
F
V
-----KSNQ----
H
E
I
A
V
I
NMQG
R
T
F
-L---------A--------D---------LD--
D
P
F
R
K
M
D
Y
L
I
E
E
A
K--KR-T
N
I
I
F
V
D
FHAETTSE---------K------------E
A
M
G
W
Y
L-D--
G
R
V
T
A
V
V
GT
H
T
H
V
QTSDNR---------------I--L----------PEGT
A
Y
L
TDTGMTG
P
-
Y
-
D
A
I
LG
M
E
K
E
A
V
I
R
R
F
K
T
----AL--PTR------FEVPKT
G
R
A
V
L
SG
C
L
I
T
LDES--TG
K
A
Q
K
I
D
R
I
L
INEDHPFSFD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_CBE
99.49
66%
-106
- C2 -
4B2O
3
YMDB_BACSU
C:
[1-262]
------------------------------
M
R
I
L
F
I
G
D
V
V
G
S
----------------
P
G
R
D
M
V
K
E
Y
V
P
K
L
K
T
K
----
Y
K
P
H
F
T
I
I
N
G
E
N
A
A
H
G
K
G
----
L
----------
T
E
----
K
I
Y
H
S
L
I
Q
-
S
G
A
D
A
I
T
M
G
N
H
T
W
D
K
--
K
E
--
I
F
D
F
I
D
-
D
V
P
N
-
L
V
R
P
A
N
F
---
P
E
G
--
T
---------
P
G
-----
K
G
I
T
Y
V
-----
K
A
N
G
----
K
E
L
A
V
I
N
L
Q
G
R
T
F
-
L
---------
P
--------
P
---------
L
D
--
D
P
F
L
K
A
D
E
L
I
A
E
A
A
--
K
R
-
T
P
Y
I
F
I
D
F
H
A
E
A
T
S
E
---------
K
------------
L
A
L
G
W
Y
T
-
D
--
G
R
A
S
A
V
V
G
T
H
T
H
V
Q
T
A
D
N
R
---------------
I
--
L
----------
P
K
G
T
A
Y
I
T
D
V
G
M
T
G
P
-
Y
-
D
G
I
L
G
M
D
R
E
T
I
I
K
R
F
K
T
----
N
L
--
P
V
R
------
F
T
V
A
E
-
G
K
T
T
L
S
G
V
V
I
D
I
D
D
Q
--
T
K
K
A
V
K
I
E
R
I
L
I
N
D
D
H
M
F
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_CBE
99.47
66%
-105
- C2 -
4B2O
3
YMDB_BACSU
D:
[1-262]
------------------------------
M
R
I
L
F
I
G
D
V
V
G
S
----------------
P
G
R
D
M
V
K
E
Y
V
P
K
L
K
T
K
----
Y
K
P
H
F
T
I
I
N
G
E
N
A
A
H
G
K
G
----
L
----------
T
E
----
K
I
Y
H
S
L
I
Q
-
S
G
A
D
A
I
T
M
G
N
H
T
W
D
K
--
K
E
--
I
F
D
F
I
D
-
D
V
P
N
-
L
V
R
P
A
N
F
---
P
E
G
--
T
---------
P
G
-----
K
G
I
T
Y
V
-----
K
A
N
G
----
K
E
L
A
V
I
N
L
Q
G
R
T
F
-
L
---------
P
--------
P
---------
L
D
--
D
P
F
L
K
A
D
E
L
I
A
E
A
A
--
K
R
-
T
P
Y
I
F
I
D
F
H
A
E
A
T
S
E
---------
K
------------
L
A
L
G
W
Y
T
-
D
--
G
R
A
S
A
V
V
G
T
H
T
H
V
Q
T
A
D
N
R
---------------
I
--
L
----------
P
K
G
T
A
Y
I
T
D
V
G
M
T
G
P
-
Y
-
D
G
I
L
G
M
D
R
E
T
I
I
K
R
F
K
T
----
N
L
--
P
V
R
------
F
T
V
A
E
-
G
K
T
T
L
S
G
V
V
I
D
I
D
D
Q
--
T
K
K
A
V
K
I
E
R
I
L
I
N
D
D
H
M
F
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_CBE
99.31
66%
-106
- C2 -
4B2O
3
YMDB_BACSU
B:
[1-262]
------------------------------
M
R
I
L
F
I
G
D
V
V
G
S
----------------
P
G
R
D
M
V
K
E
Y
V
P
K
L
K
T
K
----
Y
K
P
H
F
T
I
I
N
G
E
N
A
A
H
G
K
G
----
L
----------
T
E
----
K
I
Y
H
S
L
I
Q
-
S
G
A
D
A
I
T
M
G
N
H
T
W
D
K
--
K
E
--
I
F
D
F
I
D
-
D
V
P
N
-
L
V
R
P
A
N
F
---
P
E
G
--
T
---------
P
G
-----
K
G
I
T
Y
V
-----
K
A
N
G
----
K
E
L
A
V
I
N
L
Q
G
R
T
F
-
L
---------
P
--------
P
---------
L
D
--
D
P
F
L
K
A
D
E
L
I
A
E
A
A
--
K
R
-
T
P
Y
I
F
I
D
F
H
A
E
A
T
S
E
---------
K
------------
L
A
L
G
W
Y
T
-
D
--
G
R
A
S
A
V
V
G
T
H
T
H
V
Q
T
A
D
N
R
---------------
I
--
L
----------
P
K
G
T
A
Y
I
T
D
V
G
M
T
G
P
-
Y
-
D
G
I
L
G
M
D
R
E
T
I
I
K
R
F
K
T
----
N
L
--
P
V
R
------
F
T
V
A
E
-
G
K
T
T
L
S
G
V
V
I
D
I
D
D
Q
--
T
K
K
A
V
K
I
E
R
I
L
I
N
D
D
H
M
F
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
99.17
66%
-106
- C2 -
4B2O
3
YMDB_BACSU
A:
[1-262]
------------------------------
M
R
I
L
F
I
G
D
V
V
G
S
----------------
P
G
R
D
M
V
K
E
Y
V
P
K
L
K
T
K
----
Y
K
P
H
F
T
I
I
N
G
E
N
A
A
H
G
K
G
----
L
----------
T
E
----
K
I
Y
H
S
L
I
Q
-
S
G
A
D
A
I
T
M
G
N
H
T
W
D
K
--
K
E
--
I
F
D
F
I
D
-
D
V
P
N
-
L
V
R
P
A
N
F
---
P
E
G
--
T
---------
P
G
-----
K
G
I
T
Y
V
-----
K
A
N
G
----
K
E
L
A
V
I
N
L
Q
G
R
T
F
-
L
---------
P
--------
P
---------
L
D
--
D
P
F
L
K
A
D
E
L
I
A
E
A
A
--
K
R
-
T
P
Y
I
F
I
D
F
H
A
E
A
T
S
E
---------
K
------------
L
A
L
G
W
Y
T
-
D
--
G
R
A
S
A
V
V
G
T
H
T
H
V
Q
T
A
D
N
R
---------------
I
--
L
----------
P
K
G
T
A
Y
I
T
D
V
G
M
T
G
P
-
Y
-
D
G
I
L
G
M
D
R
E
T
I
I
K
R
F
K
T
----
N
L
--
P
V
R
------
F
T
V
A
E
-
G
K
T
T
L
S
G
V
V
I
D
I
D
D
Q
--
T
K
K
A
V
K
I
E
R
I
L
I
N
D
D
H
M
F
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
87.15
45%
-91
- C2 -
1T70
-
?
A:
[1-255]
------------------------------
M
R
V
L
F
I
G
D
V
F
G
Q
----------------
P
G
R
R
V
L
Q
N
H
L
P
T
I
R
P
Q
----
F
D
--
F
V
I
V
N
M
E
N
S
A
G
G
F
G
----
M
----------
H
R
----
D
A
A
R
G
A
L
E
-
A
G
A
G
C
L
T
L
G
N
H
A
W
H
H
--
K
D
--
I
Y
P
M
L
S
-
E
D
T
Y
P
I
V
R
P
L
N
Y
---
A
D
P
--
G
---
T
-----
P
G
-----
V
G
W
R
T
F
-----
D
V
N
G
----
E
K
L
T
V
V
N
L
L
G
R
V
F
-
M
---------
E
--------
A
---------
V
D
--
N
P
F
R
T
M
D
A
L
L
E
--
R
--
D
D
-
L
G
T
V
F
V
D
F
H
A
E
A
T
S
E
---------
K
------------
E
A
M
G
W
H
L
-
A
--
G
R
V
A
A
V
I
G
T
H
T
H
V
P
T
A
D
T
R
---------------
I
--
L
----------
K
G
G
T
A
Y
Q
T
D
A
G
F
T
G
P
-
H
-
D
S
I
I
G
S
A
I
E
G
P
L
Q
R
F
L
T
----
E
R
--
P
H
R
------
Y
G
V
A
E
-
G
R
A
E
L
N
G
--
V
A
L
H
F
E
--
G
G
K
A
T
A
A
E
R
Y
R
F
I
E
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
86.64
45%
-95
- C2 -
1T70
-
?
A:
[1-255]
------------------------------
M
R
V
L
F
I
G
D
V
F
G
Q
----------------
P
G
R
R
V
L
Q
N
H
L
P
T
I
R
P
Q
------
F
D
F
V
I
V
N
M
E
N
S
A
G
G
F
G
----
M
----------
H
R
----
D
A
A
R
G
A
L
E
-
A
G
A
G
C
L
T
L
G
N
H
A
W
H
H
--
K
D
--
I
Y
P
M
L
S
E
D
T
Y
P
-
I
V
R
P
L
N
Y
---
A
D
P
--
G
---
T
-----
P
G
-----
V
G
W
R
T
F
-----
D
V
N
G
----
E
K
L
T
V
V
N
L
L
G
R
V
F
-
M
---------
E
--------
A
---------
V
D
--
N
P
F
R
T
M
D
A
L
L
E
R
D
----
D
-
L
G
T
V
F
V
D
F
H
A
E
A
T
S
E
---------
K
------------
E
A
M
G
W
H
L
-
A
--
G
R
V
A
A
V
I
G
T
H
T
H
V
P
T
A
D
T
R
---------------
I
--
L
----------
K
G
G
T
A
Y
Q
T
D
A
G
F
T
G
P
-
H
-
D
S
I
I
G
S
A
I
E
G
P
L
Q
R
F
L
T
----
E
R
--
P
H
R
------
Y
G
V
A
E
G
R
-
A
E
L
N
G
V
A
L
H
F
E
----
G
G
K
A
T
A
A
E
R
Y
R
F
I
E
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
86.57
41%
-90
- C2 -
1T71
2
Y349_MYCPN
A:
[5-272]
------------------------------
I
K
F
I
F
L
G
D
V
Y
G
K
----------------
A
G
R
N
I
I
K
N
N
L
A
Q
L
K
S
K
----
Y
Q
A
D
L
V
I
V
N
A
E
N
T
T
H
G
K
G
----
L
----------
S
L
----
K
H
Y
E
F
L
K
E
-
A
G
V
N
Y
I
T
M
G
N
H
T
W
F
Q
--
K
L
D-
L
A
V
V
I
N
--
K
K
D
-
L
V
R
P
L
N
L
---
D
T
S
FA
F
H--
N
-----
L
G
-----
Q
G
S
L
V
F
-----
E
F
N
K
----
A
K
I
R
I
T
N
L
L
G
T
S
V
P
L
---------
P
F
-------
K
---------
T
T
--
N
P
F
K
V
L
K
E
L
I
L
K
R
----
D
-
C
D
L
H
I
V
D
F
H
A
E
T
T
S
E
---------
K
------------
N
A
F
C
M
A
F
-
D
--
G
Y
V
T
T
I
F
G
T
H
T
H
V
P
S
A
D
L
R
---------------
I
--
T
----------
P
K
G
S
A
Y
I
T
D
V
G
M
C
G
P
-
G
F
G
S
V
I
G
A
N
P
E
Q
S
I
R
L
F
C
A
----
G
S
--
R
E
H
------
F
E
V
S
K
C
G
-
A
Q
L
N
G
V
F
F
E
V
D
V
N
--
T
K
K
V
I
K
T
E
A
I
R
I
V
E
D
D
P
R
Y
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
85.91
39%
-88
- C2 -
1T71
2
Y349_MYCPN
A:
[5-270]
------------------------------
I
K
F
I
F
L
G
D
V
Y
G
K
----------------
A
G
R
N
I
I
K
N
N
L
A
Q
L
K
S
K
----
Y
Q
A
D
L
V
I
V
N
A
E
N
T
T
H
G
K
G
----
L
----------
S
L
----
K
H
Y
E
F
L
K
E
-
A
G
V
N
Y
I
T
M
G
N
H
T
W
F
Q
--
K
L
--
D
L
A
V
V
I
-
N
K
K
D
-
L
V
R
P
L
N
L
-----
D
--
T
---
S
FAFHN
L
G
-----
Q
G
S
L
V
F
-----
E
F
N
K
----
A
K
I
R
I
T
N
L
L
G
T
S
V
-
P
---------
L
--------
P
---------
F
K
T
T
N
P
F
K
V
L
K
E
L
I
--
L
K
--
R
D
-
C
D
L
H
I
V
D
F
H
A
E
T
T
S
E
---------
K
------------
N
A
F
C
M
A
F
-
D
--
G
Y
V
T
T
I
F
G
T
H
T
H
V
P
S
A
D
L
R
---------------
I
--
T
----------
P
K
G
S
A
Y
I
T
D
V
G
M
C
G
P
G
F
-
G
S
V
I
G
A
N
P
E
Q
S
I
R
L
F
C
A
----
G
S
--
R
E
H
------
F
E
V
S
K
C
G
-
A
Q
L
N
G
V
F
F
E
V
D
V
N
--
T
K
K
V
I
K
T
E
A
I
R
I
V
E
D
D
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
84.93
38%
-97
- C2 -
2Z06
3
?
A:
[1-251]
------------------------------
M
R
V
L
F
I
G
D
V
M
A
E
----------------
P
G
L
R
A
V
G
L
H
L
P
D
I
R
D
------
R
Y
D
L
V
I
A
N
G
E
N
A
A
R
G
K
G
----
L
----------
D
R
----
R
S
Y
R
L
L
R
E
-
A
G
V
D
L
V
S
L
G
N
H
A
W
D
H
--
K
E
--
V
Y
A
L
L
E
--
S
E
P
-
V
V
R
P
L
N
Y
---
P
P
G
------
T
-----
P
G
-----
K
G
F
W
R
L
-----
E
V
G
G
----
E
S
L
L
F
V
Q
V
M
G
R
I
F
-
M
---------
D
--------
P
---------
L
D
--
D
P
F
R
A
L
D
R
L
L
E
--
E
--
E
K
-
A
D
Y
V
L
V
E
V
H
A
E
A
T
S
E
---------
K
------------
M
A
L
A
H
Y
L
D
G
--
R
-
A
S
A
V
L
G
T
H
T
H
V
P
T
L
D
A
T
---------------
R
--
L
----------
P
K
G
T
L
Y
Q
T
D
V
G
M
T
G
T
-
Y
-
H
S
I
I
G
G
E
V
E
T
F
L
A
R
F
L
T
----
G
R
--
P
Q
P
------
F
R
A
A
Q
G
K
-
A
R
F
H
A
T
E
L
V
F
E
----
G
G
R
P
V
A
I
S
P
Y
V
W
E
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
80.92
43%
-102
- C2 -
2Z06
3
?
A:
[1-220]
------------------------------
M
R
V
L
F
I
G
D
V
M
A
E
----------------
P
G
L
R
A
V
G
L
H
L
P
D
I
R
D
R
----
Y
D
--
L
V
I
A
N
G
E
N
A
A
R
G
K
G
----
L
----------
D
R
----
R
S
Y
R
L
L
R
E
-
A
G
V
D
L
V
S
L
G
N
H
A
W
D
H
--
K
E
--
V
Y
A
L
L
--
E
S
E
P
-
V
V
R
P
L
N
Y
---
P
P
G
--
T
---------
P
G
-----
K
G
F
W
R
L
-----
E
V
G
G
----
E
S
L
L
F
V
Q
V
M
G
R
I
F
-
M
---------
D
--------
P
---------
L
D
--
D
P
F
R
A
L
D
R
L
L
E
E
E
K
-----
A
D
Y
V
L
V
E
V
H
A
E
A
T
S
E
---------
K
------------
M
A
L
A
H
Y
L
-
D
--
G
R
A
S
A
V
L
G
T
H
T
H
V
P
T
L
D
A
T
---------------
R
--
L
----------
P
K
G
T
L
Y
Q
T
D
V
G
M
T
G
T
-
Y
-
H
S
I
I
G
G
E
V
E
T
F
L
A
R
F
L
T
----
G
R
--
P
Q
P
------
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
80.59
43%
-100
- C2 -
2Z06
4
?
B:
[1-220]
------------------------------
M
R
V
L
F
I
G
D
V
M
A
E
----------------
P
G
L
R
A
V
G
L
H
L
P
D
I
R
D
R
----
Y
D
--
L
V
I
A
N
G
E
N
A
A
R
G
K
G
----
L
----------
D
R
----
R
S
Y
R
L
L
R
E
-
A
G
V
D
L
V
S
L
G
N
H
A
W
D
H
--
K
E
--
V
Y
A
L
L
--
E
S
E
P
-
V
V
R
P
L
N
Y
---
P
P
G
--
T
---------
P
G
-----
K
G
F
W
R
L
-----
E
V
G
G
----
E
S
L
L
F
V
Q
V
M
G
R
I
F
-
M
---------
D
--------
P
---------
L
D
--
D
P
F
R
A
L
D
R
L
L
E
E
E
K
-----
A
D
Y
V
L
V
E
V
H
A
E
A
T
S
E
---------
K
------------
M
A
L
A
H
Y
L
-
D
--
G
R
A
S
A
V
L
G
T
H
T
H
V
P
T
L
D
A
T
---------------
R
--
L
----------
P
K
G
T
L
Y
Q
T
D
V
G
M
T
G
T
-
Y
-
H
S
I
I
G
G
E
V
E
T
F
L
A
R
F
L
T
----
G
R
--
P
Q
P
------
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_CBE
80.56
43%
-101
- C2 -
2Z06
3
?
C:
[1-220]
------------------------------
M
R
V
L
F
I
G
D
V
M
A
E
----------------
P
G
L
R
A
V
G
L
H
L
P
D
I
R
D
R
----
Y
D
--
L
V
I
A
N
G
E
N
A
A
R
G
K
G
----
L
----------
D
R
----
R
S
Y
R
L
L
R
E
-
A
G
V
D
L
V
S
L
G
N
H
A
W
D
H
--
K
E
--
V
Y
A
L
L
--
E
S
E
P
-
V
V
R
P
L
N
Y
---
P
P
G
--
T
---------
P
G
-----
K
G
F
W
R
L
-----
E
V
G
G
----
E
S
L
L
F
V
Q
V
M
G
R
I
F
-
M
---------
D
--------
P
---------
L
D
--
D
P
F
R
A
L
D
R
L
L
E
E
E
K
-----
A
D
Y
V
L
V
E
V
H
A
E
A
T
S
E
---------
K
------------
M
A
L
A
H
Y
L
-
D
--
G
R
A
S
A
V
L
G
T
H
T
H
V
P
T
L
D
A
T
---------------
R
--
L
----------
P
K
G
T
L
Y
Q
T
D
V
G
M
T
G
T
-
Y
-
H
S
I
I
G
G
E
V
E
T
F
L
A
R
F
L
T
----
G
R
--
P
Q
P
------
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
79.54
36%
-70
- C2 -
1T71
2
Y349_MYCPN
A:
[1-281]
--------------------------M
M
N
S
I
K
F
I
F
L
G
D
V
Y
G
K
----------------
A
G
R
N
I
I
K
N
N
L
A
Q
L
K
S
K
----
Y
Q
A
D
L
V
I
V
N
A
E
N
T
T
H
G
K
G
----
L
----------
S
L
----
K
H
Y
E
F
L
K
E
-
A
G
V
N
Y
I
T
M
G
N
H
T
W
F
Q
--
K
L
--
D
L
A
V
V
I
-
N
K
K
D
-
L
V
R
P
L
N
L
DTS
F
A
F
--
H
---
N
-----
L
G
-----
Q
G
S
L
V
F
-----
E
F
N
K
----
A
K
I
R
I
T
N
L
L
G
T
S
V
-
P
---------
L
--------
P
---------
F
K
--
T
T
N
P
F
K
V
L
K
E
L
I
L
K
--
R
D
-
C
D
L
H
I
V
D
F
H
A
E
T
T
S
E
---------
K
------------
N
A
F
C
M
A
F
-
D
--
G
Y
V
T
T
I
F
G
T
H
T
H
V
P
S
A
D
L
R
---------------
I
--
T
----------
P
K
G
S
A
Y
I
T
D
V
G
M
C
G
P
G
F
-
G
S
V
I
G
A
N
P
E
Q
S
I
R
L
F
C
A
----
G
S
--
R
E
H
------
F
E
-
V
S
K
C
G
A
Q
L
N
G
V
F
F
E
V
D
V
N
--
T
K
K
V
I
K
T
E
A
I
R
I
V
E
D
D
P
R
Y
L
K
QDYFNLI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_CBE
79.40
43%
-97
- C2 -
2Z06
3
?
D:
[1-220]
------------------------------
M
R
V
L
F
I
G
D
V
M
A
E
----------------
P
G
L
R
A
V
G
L
H
L
P
D
I
R
D
R
----
Y
D
--
L
V
I
A
N
G
E
N
A
A
R
G
K
G
----
L
----------
D
R
----
R
S
Y
R
L
L
R
E
-
A
G
V
D
L
V
S
L
G
N
H
A
W
D
H
--
K
E
--
V
Y
A
L
L
--
E
S
E
P
-
V
V
R
P
L
N
Y
---
P
P
G
--
T
---------
P
G
-----
K
G
F
W
R
L
-----
E
V
G
G
----
E
S
L
L
F
V
Q
V
M
G
R
I
F
-
M
---------
D
--------
P
---------
L
D
--
D
P
F
R
A
L
D
R
L
L
E
E
E
K
-----
A
D
Y
V
L
V
E
V
H
A
E
A
T
S
E
---------
K
------------
M
A
L
A
H
Y
L
-
D
--
G
R
A
S
A
V
L
G
T
H
T
H
V
P
T
L
D
A
T
---------------
R
--
L
----------
P
K
G
T
L
Y
Q
T
D
V
G
M
T
G
T
-
Y
-
H
S
I
I
G
G
E
V
E
T
F
L
A
R
F
L
T
----
G
R
--
P
Q
P
------
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
63.22
19%
-85
- C2 -
3IVE
5
?
A:
[7-269]
------------------------------
V
T
I
I
Y
T
N
D
L
H
A
H
V
E
P
Y
K
V
PWIADGKRDI
G
G
W
A
N
I
T
T
L
V
K
Q
E
K
A
K
----
N
K
A
T
W
F
F
D
A
G
D
Y
F
T
G
P
Y
I
S
S
L
T
K
----------
G
K
----
A
I
I
D
I
M
N
T
-
M
P
F
D
A
V
T
I
G
N
H
E
F
D
H
--
G
W
D
N
T
L
L
Q
L
S
-
Q
A
K
F
-
P
I
V
Q
G
N
I
---
F
Y
Q
NS
S
KS-
F
-----
W
D
-----
K
P
Y
T
I
I
-----
E
K
D
G
----
V
K
I
G
V
I
G
L
H
G
V
F
A
-
F
N
D
TVSAATR
V
--------
G
I
E
-------
A
R
--
D
E
I
K
W
L
Q
R
Y
I
D
E
L
K
--
G
K
-
V
D
L
T
V
A
L
I
H
E
G
V
P
A
R
---------
Q
SSMD
V
R
R
A
L
D
K
D
I
Q
T
A
S
Q
V
-
K
--
G
-
L
D
I
L
I
T
G
H
A
H
V
G
T
P
E
P
I
-----------------------------
K
V
G
N
T
L
I
L
S
T
D
S
G
G
I
-
D
-
V
G
K
L
V
L
D
Y
K
E
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
58.96
17%
-91
- C2 -
2Z1A
4
?
A:
[30-291]
------------------------------
L
T
L
V
H
T
N
D
T
H
A
H
L
E
P
V
E
L
T
L
SG
E
K
T
P
V
-
G
G
V
A
R
R
V
A
L
F
D
R
V
W
A
R
----
A
K
N
P
L
F
L
D
A
G
D
V
F
Q
G
T
L
Y
F
N
Q
Y
R
----------
G
L
----
A
D
R
Y
F
M
H
R
-
L
R
Y
R
A
M
A
L
G
N
H
E
F
D
L
--
G
P
G
P
L
A
D
F
L
K
-
G
A
R
F
-
K
V
V
S
A
N
V
---
D
A
S
RE
P
RLK
G
-----
L
F
-----
A
P
Y
A
V
V
-----
V
V
G
G
----
E
R
V
G
I
I
G
L
T
T
P
D
T
-
R
---------
E
ISNPGP--
T
V
A
-------
F
L
--
D
P
Y
E
S
A
Q
K
A
V
Y
E
L
L
A
-
K
G
-
V
N
K
I
V
V
L
S
H
L
G
Y
G
E
D
----------------------
L
K
L
A
R
R
L
-
V
--
G
-
V
Q
V
I
V
G
G
H
S
H
T
L
L
G
S
F
P
HKELSPAGPY
P
T
V
--
V
K
N
P
----------
E
G
K
D
V
L
V
V
Q
A
W
E
W
G
K
-
V
-
V
G
L
L
E
V
T
F
D
A
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
57.27
43%
-5
- C2 -
2CV9
-
?
A:
[2-220]
-------------------------------
R
V
L
F
I
G
D
V
M
A
E
----------------
P
G
L
R
A
V
G
L
H
L
P
D
I
R
D
R
----
Y
D
--
L
V
I
A
N
G
E
N
A
A
R
G
K
G
----
L
----------
D
R
----
R
S
Y
R
L
L
R
E
-
A
G
V
D
L
V
S
L
G
N
H
A
W
D
H
--
K
E
--
V
Y
A
L
L
--
E
S
E
P
-
V
V
R
P
L
N
Y
---
P
P
G
--
T
---------
P
G
-----
K
G
F
W
R
L
-----
E
V
G
G
----
E
S
L
L
F
V
Q
V
M
G
R
I
F
-
M
---------
D
--------
P
---------
L
D
--
D
P
F
R
A
L
D
R
L
L
E
E
E
K
-----
A
D
Y
V
L
V
E
V
H
A
E
A
T
S
E
---------
K
------------
M
A
L
A
H
Y
L
-
D
--
G
R
A
S
A
V
L
G
T
H
T
H
V
P
T
L
D
A
T
---------------
R
--
L
----------
P
K
G
T
L
Y
Q
T
D
V
G
M
T
G
T
-
Y
-
H
S
I
I
G
G
E
V
E
T
F
L
A
R
F
L
T
----
G
R
--
P
Q
P
------
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
HHSearch
56.45
18%
-74
* C2 *
1HP1
5
USHA_ECOLI
A:
[9-280]
------------------------------
I
T
V
L
H
T
N
D
H
H
G
H
FWRNEYGE--------
Y
G
L
A
A
Q
K
T
L
V
D
G
I
R
K
E
V
A
A
E
G
G
S
V
L
L
L
S
G
G
D
I
N
T
G
V
P
E
S
D
L
Q
D
----------
A
E
----
P
D
F
R
G
M
N
L
-
V
G
Y
D
A
M
A
I
G
N
H
E
F
D
N
--
P
L
T
V
L
R
Q
Q
E
K
-
W
A
K
F
-
P
L
L
S
A
N
I
---
Y
Q
K
ST
G
E--
R
-----
L
F
-----
K
P
W
A
L
F
-----
K
R
Q
D
----
L
K
I
A
V
I
G
L
T
T
D
D
T
-
A
---------
K
IGNPEYFT
D
I
E
-------
F
R
--
K
P
A
D
E
A
K
L
V
I
Q
E
L
Q
Q
T
E
K
-
P
D
I
I
I
A
A
T
H
M
G
H
Y
D
N
GEHGSNAPG
D
------------
V
E
M
A
R
A
L
-
P
AG
S
-
L
A
M
I
V
G
G
H
S
Q
D
P
V
C
M
A
A
ENKKQVDYVPG
T
P
C
K
P
--
D
----------
Q
Q
N
G
I
W
I
V
Q
A
H
E
W
G
K
-
Y
-
V
G
R
A
D
F
E
F
R
N
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
53.87
17%
-69
- C2 -
3JYF
11
?
A:
[9-332]
------------------------------
L
R
I
M
E
T
T
D
L
H
S
N
MMDFDYYKDAATEK--
F
G
L
V
R
T
A
S
L
I
E
Q
A
R
A
E
----
V
K
N
S
V
L
V
D
N
G
D
V
I
Q
G
S
P
L
G
D
--
Y
M
A
A
K
GLKEGD
V
H
----
P
V
Y
K
A
M
N
T
-
L
N
Y
A
V
G
N
L
G
N
H
E
F
N
Y
--
G
L
D
F
L
H
K
A
L
A
-
G
A
K
F
-
P
Y
V
N
A
N
I
---
I
D
A
KT
G
K--
P
-----
M
F
-----
T
P
Y
L
I
Q
D
T
R
V
V
D
S
D
G
Q
I
H
T
L
R
I
G
Y
I
G
F
V
P
P
Q
I
-
M
---------
T
W
D
K
ANLNG
K
V
T
-------
V
N
--
D
I
T
E
T
A
R
K
Y
I
P
E
M
R
A
-
K
G
-
A
D
V
V
V
V
V
A
H
S
G
L
S
A
D
---------
P
YQAMAENS----
V
Y
Y
L
S
Q
V
-
P
--
G
-
V
D
A
I
M
F
G
H
A
H
A
V
F
P
G
K
D
---------------
F
--
A
NIKGADIAKG
T
L
N
G
V
P
A
V
M
P
G
M
W
G
D
-
H
-
L
G
V
V
D
L
V
L
N
N
D
S
G
K
W
Q
V
T
Q
S
K
A
E
A
R
P
I
Y
DAVAKK
S
L
A
A
E
D
--
G
K
L
V
S
V
L
K
A
D
H
D
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
Fugue
53.34
17%
-74
- C2 -
3ZTV
4
5NTD_HAEIN
A:
[8-573]
H
K
A
V
E
L
S
I
L
H
I
N
DHHSYL
E
P
H
E
T
R
I
NLNG
Q
Q
T
K
V
D
I
G
----------------------
G
F
S
A
V
N
A
K
L
N
K
L
R
K
K
----
Y
K
N
P
L
V
L
H
A
G
-
D
A
I
T
G
T
L
----
Y
----------
F
T
L
F
GG
S
A
D
A
A
V
M
N
A
G
N
F
H
Y
F
T
L
G
N
H
E
F
D
A
G
N
E
G
--
L
L
K
L
L
E
-
P
L
K
I
-
P
V
L
S
A
N
V
---
I
P
D
--
K
---
S
-----
S
I
LYNKW
K
P
Y
D
I
F
-----
T
V
D
G
----
E
K
I
A
I
I
G
L
D
T
V
N
K
-
T
---------
V
--------
N
S
S
S
P
G
KD
V
K
F
Y
--
D
E
I
A
T
A
Q
I
M
A
N
A
L
K
--
Q
Q
G
I
N
K
I
I
L
L
S
H
A
G
S
E
K
N
---------
I
------------
E
I
A
Q
K
-
V
-
N
--
D
-
I
D
V
I
V
T
G
D
S
H
------
Y
---------------
L
--
Y
----------
G
N
D
E
L
R
S
L
K
L
P
V
I
Y
E
-
Y
----------
P
L
E
F
K
N
P
N
----
G
E
--
P
V
F
------
V
M
E
G
W
A
Y
S
A
V
V
G
D
L
G
V
K
F
S
P
E
G
I
A
S
I
T
R
K
I
P
H
V
L
M
S
S
H
K
L
Q
V
K
N
SEG
K
W
A
E
L
T
G
D
E
R
K
K
A
L
D
T
L
K
S
MKSISLD
D
H
D
A
K
T
D
K
L
I
A
K
Y
K
S
E
K
D
R
L
A
Q
EIV
G
V
I
T
G
S
A
M
P
G
G
SANRIPNKAGSNPEGS
I
A
T
R
F
I
A
E
T
M
Y
N
E
L
KTVD
L
T
I
Q
N
AGGVRA
D
I
L
P
G
N
VT
F
N
D
A
Y
T
F
L
PFGN
T
L
Y
T
Y
KME
G
S
L
V
K
Q
V
L
E
D
A
M
Q
F
A
L
VDGSTGA
F
P
Y
G
A
G
I
R
Y
E
A
N
ETPNAEGKRLV
S
V
E
V
L
NKTQ
Q
W
E
P
IDDNKRYL
V
G
T
N
A
Y
V
A
G
GKDGY
K
T
F
G
K
L
FNDPKYEGVDTYLP
D
A
E
S
F
I
K
F
M
K
K
H
P
HFEAYTSSN
V
K
F
N
A
ST