@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1433: (2016-03-24 )
VAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERNWGGTCVLRGCDPKKVLIGAREARNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSHSLQVGDDLIYAEKIVIATGATPSTLKVEGKEYIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKLHIKGKDSFSLQTDLIIGATGRMPNIAHLSLENASIDYTKKGIVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVNEKITYPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN

Atome Classification :

(20 SA) .........10........20......-..30......-.---------.40........50....-..------..60....-..-..70.---.-.--....-.80........90........100...-....110.......120..--.--.----.-----.---------...130.......140....---.-...150.------........160.-......170.......180..---...---..190.......200.......210.......-220.......230.-.-...-..240-.---..-----.--..------..-250-.......260.......270.......280........290.......300....-...310.......320....-...--330..--......340.......350.......360-----------.-.-..-.....370.-......380.......390.......400.......410.......420.......430.......440....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VAKFTYDVVIIGSGASGTTVAFEAQAA-GLKVAIVEER-N---------WGGTCVLRGCDPKKVLI-GA------REARNLST-RL-RGKGI---K-Q--AATI-SWTDLMAFKETFVENVPESRLASFQEA-GIETFFGAASFQDSH--SL--Q--V----G-----D---------DLIYAEKIVIATGA-TPSTL---K-VEGK--E------YIQTSDDFLSLE-KLPDSVVFIGGGYISFEFASI---ALA---AGRDVHIIHHNSEPLKKFDPDFVAALVANIKD-EGIHFHFDTDITKI-E-NDG-GKLH--I---KG-----K--DS------FS-LQT-DLIIGATGRMPNIAHLSLENASIDYTKKG-IVVNEKLQTPNNPHIYACGDVAATK-GAPLTPVVSLEAALVAKNVI-GVN--E-KIT--YPAIPSVVFTSPKLASIGISTEEAKAN-------------P-E-KY-QIKNHDTTS-WYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN
23 HHSearch 96.5531% -95 - C1 -3O0H ? A:[24-469] --SFDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEY-R---------IGGTCVIRGCVPKKLYF-YA------SQYAQEFS-KS-IGFGW---K-YA-DPIF-NWEKLVAAKNKEISRLEGLYREGLQNS-NVHIYESRAVFVDEH--TLELS--V----T-----G---------ERISAEKILIATGA-KIVSN-----IKGS--D------LCLTSNEIFDLE-KLPKSIVIVGGGYIGVEFANI---FHG---LGVKTTLLHRGDLILRNFDYDLRQLLNDAMVA-KGISIIYEATVSQV-Q-STE-NCYN--V---VL-----T--NG------QT-ICA-DRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMT-TNVSHIWAVGDVT--G-HIQLTPVAIHDAMCFVKNAF-E-----TTPD--YDLITTAVFSQPEIGTVGLSEEDALHR-------------Y-K-RV-EIYRTVFRP-MRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTM-
2 PsiBlast_PDB 93.6631% -89 - C1 -3O0H ? A:[24-469] --SFDFDLFVIGSGSGGVRAARLAGAL-GKRVAIAEEY-R---------IGGTCVIRGCVPKKLYF-YA------SQYAQEFS-KS-IGFGW---K-Y--ADPIFNWEKLVAAKNKEISRLEGLYREGLQNS-NVHIYESRAVFVDEH--TL--ELSV----T-----G---------ERISAEKILIATGAKIVSN------IKGS--D------LCLTSNEIFDLE-KLPKSIVIVGGGYIGVEFANI---FHG---LGVKTTLLHRGDLILRNFDYDLRQLLNDAMVA-KGISIIYEATVSQV-Q-STE-NCYN--V---VL-----T--NG------QT-ICA-DRVMLATGRVPNTTGLGLERAGVKVNEFG-AVVVDEKMTTNVSHIWAVGDV--TG-HIQLTPVAIHDAMCFVKNAF-E-------TTPDYDLITTAVFSQPEIGTVGLSEEDALHR-------------Y-K-RV-EIYRTVFRP-MRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTM-
22 HHSearch 92.7429% -86 - C1 -1GES GSHR_ECOLI A:[3-449] ---KHYDYIAIGGGSGGIASINRAAMY-GQKCALIEAK-E---------LGGTCVNVGCVPKKVMW-HA------AQIREAIH-MYGPDYGF---D-TT-INKF-NWETLIASRTAYIDRIHTSYENVLGKN-NVDVIKGFARFVDAK--TL--E--V----N-----G---------ETITADHILIATGG-RPSHP---D-IPGV--E------YGIDSDGFFALP-ALPERVAVVGAGYIGVELGGV---ING---LGAKTHLFEMFDAPLPSFDPMISETLVEVMNA-EGPQLHTNAIPKAV-V-KNTDGSLT--L---EL-----E--DG------RS-ETV-DCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQN-TNIEGIYAVGDNT--G-AVELTPVAVAAGRRLSERLF-NNKPDE-HLD--YSNIPTVVFSHPPIGTVGLTEPQAREQY------------GDD-QV-KVYKSSFTA-MYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTM-
39 HHSearch 90.1028% -88 - C1 -2YQU ? A:[1-444] ----MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKA---------LGGTCLRVGCIPSKALL-ET------TERIYEAKKGL-LGAKV---K----GVEL-DLPALMAHKDKVVQANTQGVEFLFKKN-GIARHQGTARFLSER--KV--L--VEE--T-----G---------EELEARYILIATGS-APLIP---P-WAQV--DYER---V-VTSTEALSFP-EVPKRLIVVGGGVIGLELGVV---WHR---LGAEVIVLEYMDRILPTMDLEVSRAAERVFKK-QGLTIRTGVRVTAV-V-PEA-KGAR--V---EL-----E--GG------EV-LEA-DRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLR-TRVPHIYAIGDVV--R-GPMLAHKASEEGIAAVEHMV-RGF--G-HVD--YQAIPSVVYTHPEIAAVGYTEEELKAQ-------------G-I-PY-KVGKFPYSA-SGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEA-
31 HHSearch 89.7229% -89 - C1 -3URH ? A:[26-480] -----YDLIVIGSGPGGYVCAIKAAQL-GMKVAVVEKRST---------YGGTCLNVGCIPSKALL-HA------SEMFHQAQHGL-EALGV---E-VA-NPKL-NLQKMMAHKDATVKSNVDGVSFLFKKN-KIDGFQGTGKVLGQG--KV--S--V----TNEKGEE---------QVLEAKNVVIATGS-DVAG------IPGV--EVAFDEKTIVSSTGALALE-KVPASMIVVGGGVIGLELGSV---WAR---LGAKVTVVEFLDTILGGMDGEVAKQLQRMLTK-QGIDFKLGAKVTGA-V-KSG-DGAK--V---TFEPV--KGGEA------TT-LDA-EVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQ-TSIAGVYAIGDVV--R-GPMLAHKAEDEGVAVAEIIA-GQA--G-HVN--YDVIPGVVYTQPEVASVGKTEEELKAA-------------G-V-AY-KIGKFPFTA-NGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEA-
37 HHSearch 87.2727% -85 - C1 -3DK9 GSHR_HUMAN A:[17-477] -AVASYDYLVIGGGSGGLASARRAAEL-GARAAVVESH-K---------LGGTCVNVGCVPKKVMW-NT------AVHSEFMH-DH-ADYGF---P-SC-EGKF-NWRVIKEKRDAYVSRLNAIYQNNLTKS-HIEIIRGHAAFTSDPKPTI--E--V----S-----G---------KKYTAPHILIATGG-MPSTPHESQ-IPGA--S------LGITSDGFFQLE-ELPGRSVIVGAGYIAVEMAGI---LSA---LGSKTSLMIRHDKVLRSFDSMISTNCTEELEN-AGVEVLKFSQVKEV-K-KTL-SGLE--VSMVTA-----V--PGRLPVMTMI-PDV-DCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQN-TNVKGIYAVGDVC--G-KALLTPVAIAAGRKLAHRLF-EYKEDS-KLD--YNNIPTVVFSHPPIGTVGLTEDEAIHKY------------G-IENV-KTYSTSFTP-MYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL-
26 HHSearch 86.1328% -85 * C1 *2EQ6 ? A:[4-450] --MKTYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAG-E---------VGGVCLNVGCIPTKALL-HA------AETLHHLK-VA-EGFGL---K-A--KPEL-DLKKLGGWRDQVVKKLTGGVGTLLKGN-GVELLRGFARLVGPK--EV--E--V----G-----G---------ERYGAKSLILATGS-EPLEL---KGFPFGE-D------V-WDSTRALKVEEGLPKRLLVIGGGAVGLELGQV---YRR---LGAEVTLIEYMPEILPQGDPETAALLRRALEK-EGIRVRTKTKAVGY-E-KKK-DGLH--V---RLEPAEGG--EG------EE-VVV-DKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARME-TSVPGVYAIGDAA--R-PPLLAHKAMREGLIAAENAA-GKD--S-AFD--Y-QVPSVVYTSPEWAGVGLTEEEAKRA-------------G-Y-KV-KVGKFPLAA-SGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEA-
34 HHSearch 86.1027% -89 - C1 -1EBD DLDH1_GEOSE A:[2-450] ---IETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG-N---------LGGVCLNVGCIPSKALI-SA------SHRYEQAK-HS-EEMGI---K-AE-NVTI-DFAKVQEWKASVVKKLTGGVEGLLKGN-KVEIVKGEAYFVDAN--TV--R--VVNGDS-----A---------QTYTFKNAIIATGS-RPIEL---P-NFKFSNR------I-LDSTGALNLG-EVPKSLVVIGGGYIGIELGTA---YAN---FGTKVTILEGAGEILSGFEKQMAAIIKKRLKK-KGVEVVTNALAKGA-E-ERE-DGVT--V---TYE----A--NGET----KT-IDA-DYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCR-TSVPNIFAIGDIV--P-GPALAHKASYEGKVAAEAIA-GHP--S-AVD--YVAIPAVVFSDPECASVGYFEQQAKDE-------------G-I-DV-IAAKFPFAA-NGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEA-
40 HHSearch 85.6930% -80 - C1 -2R9Z GASHR_MARGR A:[2-447] --TQHFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESK-A---------LGGTCVNVGCVPKKVMW-YA------SHLAEAVR-DA-PGFGV---Q-AS----L-DWPRLVAGRDRYIGAINSFWDGYVERL-GITRVDGHARFVDAH--TI--E--V----E-----G---------QRLSADHIVIATGG-RPIVP---R-LPGA--E------LGITSDGFFALQ-QQPKRVAIIGAGYIGIELAGL---LRS---FGSEVTVVALEDRLLFQFDPLLSATLAENMHA-QGIETHLEFAVAAL-E-RDA-QGTT--L---VA-----Q--DG------TRLEGF-DSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQN-TNVPGVYALGDIT--G-RDQLTPVAIAAGRRLAERLF-DGQSER-KLD--YDNIPTVVFAHPPLSKVGLSEPEARER-------------L-G-DVLTVYETSFTP-MRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEELVTL-
16 PsiBlast_PDB 85.3927% -89 - C1 -2WOW ? A:[8-474] -----FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQ-TSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGW-EF-DGSSV---K-A-------NWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKN--VV--V--V----R-----ETADPKSAVKERLQADHILLATGS-WPQMP---A-IPGI--E------HCISSNEAFYLP-EPPRRVLTVGGGFISVEFAGI---FNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTA-NGIEIMTNENPAKV-SLNTD-GSKH--V---TF-----E--SG------KT-LDV-DVVMMAIGRIPRTNDLQLGNVGVKLTPKG-GVQVDEFSRTNVPNIYAIGDI--TD-RLMLTPVAINEGAALVDTVF-GNK--P-RKTD-HTRVASAVFSIPPIGTCGLIEEVAAKE-------------F-E-KV-AVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSM-
8 PsiBlast_PDB 84.9528% -82 - C1 -2W0H ? A:[25-491] -----YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLMV-TG------AQYMDLIR-ES-GGFGWEMDR-E--SLCP-NWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAH--TV--V--V----R-----KSEDPHSDVLETLDTEYILIATGS-WPTRL---G-VPGD--E------FCITSNEAFYLE-DAPKRMLCVGGGYIAVEFAGIFNGYKP---CGGYVDLCYRGDLILRGFDTEVRKSLTKQLGA-NGIRVRTNLNPTKITK-NED-GSNH--V---HF-----N--DG------TE-EDY-DQVMLAIGRVPRSQALQLDKAGVRTGKNG-AVQVDAYSKTSVDNIYAIGDV--TN-RVMLTPVAINEGAAFVETVF-GGK--P-RATD-HTKVACAVFSIPPIGTCGMTEEEAAKN-------------Y-E-TV-AVYASSFTPLMHNISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSM-
15 PsiBlast_PDB 84.7727% -89 - C1 -2WOV ? A:[8-474] -----FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQ-TSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGW-EF-DGSSV---K-A-------NWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKN--VV--V--V----R-----ETADPKSAVKERLQADHILLATGS-WPQMP---A-IPGI--E------HCISSNEAFYLP-EPPRRVLTVGGGFISVEFAGI---FNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTA-NGIEIMTNENPAKV-SLNTD-GSKH--V---TF-----E--SG------KT-LDV-DVVMMAIGRIPRTNDLQLGNVGVKLTPKG-GVQVDEFSRTNVPNIYAIGDI--TD-RLMLTPVAINEGAALVDTVF-GNK--P-RKTD-HTRVASAVFSIPPIGTCGLIEEVAAKE-------------F-E-KV-AVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSM-
12 PsiBlast_PDB 84.4928% -84 - C1 -2X50 ? A:[25-491] -----YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLMV-TG------AQYMDLIR-ES-GGFGWEMDR-E--SLCP-NWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAH--TV--V--V----R-----KSEDPHSDVLETLDTEYILIATGS-WPTRL---G-VPGD--E------FCITSNEAFYLE-DAPKRMLCVGGGYIAVEFAGIFNGYKP---CGGYVDLCYRGDLILRGFDTEVRKSLTKQLGA-NGIRVRTNLNPTKITK-NED-GSNH--V---HF-----N--DG------TE-EDY-DQVMLAIGRVPRSQALQLDKAGVRTGKNG-AVQVDAYSKTSVDNIYAIGDV--TN-RVMLTPVAINEGAAFVETVF-GGK--P-RATD-HTKVACAVFSIPPIGTCGMTEEEAAKN-------------Y-E-TV-AVYASSFTPLMHNISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSM-
9 PsiBlast_PDB 84.4028% -85 - C1 -2YAU ? A:[25-491] -----YDLVVLGAGSGGLEAGWNAAVTHKKKVAVVDVQ-ATHGPPLFAALGGTCVNVGCVPKKLMV-TG------AQYMDLIR-ES-GGFGWEMDR-E--SLCP-NWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAH--TV--V--V----R-----KSEDPHSDVLETLDTEYILIATGS-WPTRL---G-VPGD--E------FCITSNEAFYLE-DAPKRMLCVGGGYIAVEFAGIFNGYKP---CGGYVDLCYRGDLILRGFDTEVRKSLTKQLGA-NGIRVRTNLNPTKITK-NED-GSNH--V---HF-----N--DG------TE-EDY-DQVMLAIGRVPRSQALQLDKAGVRTGKNG-AVQVDAYSKTSVDNIYAIGDV--TN-RVMLTPVAINEGAAFVETVF-GGK--P-RATD-HTKVACAVFSIPPIGTCGMTEEEAAKN-------------Y-E-TV-AVYASSFTPLMHNISGSKHKEFMIRIITNESNGEVLGVHMLGDSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEELCSM-
1 PsiBlast_PDB 84.3230% -82 - C1 -2R9Z GASHR_MARGR A:[5-448] -----FDLIAIGGGSGGLAVAEKAAAF-GKRVALIESK-A---------LGGTCVNVGCVPKKVMW-YA------SHL