@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1453: (2016-03-25 )
MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEHIDVRKGNGLAVIEKKDVIDTIVIAGMGGALIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKIYEIMVLAPSKKPVAWTKQEIFFGPCLLKDQSAIFKSKWRHEANTWQNIIQTISNNQPVSPENQAKIRELEHKIALVEDVLK

Atome Classification :

(20 SA) -----------------------------------------.......--..10.......--.20...------.....30........40........50........60........----70........80...-.....90......--------------------------..----100---.------------.......110.......120.---.--.--------....130.......140.......150....-----...160..-----.....170.--------------------......180.......190---------------.......200.......210-------------........220-........230..-----------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------MNEEQLS--KRLEKVASYIT--KNERIA------DIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT----EHIDVRKGNGLAVIE-KKDVIDTIVIAGM--------------------------GG----AL----I------------RTILEEGAAKLAGVTKLILQP---N--I--------AAWQLREWSEQNNWLITSEAILREDNKIYEI-----MVLAPSKK-----PVAWTKQEI--------------------FFGPCLLKDQSAIFKSKWR---------------HEANTWQNIIQTISNNQPV--------------SPENQAKIR-E-LEHKIALVEDVLK-----------------------------------------------------------------------------------------------------------
28 HHSearch 84.5896% -44 - C2 -3GNL - ? A:[9-240] -------------------------------------------EEQLS--KRLEKVASYIT--KNERIA------DIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIE-KKDAIDTIVIAGM--------------------------GG----TL----I------------RTILEEGAAKLAGVTKLILQP---N--I--------AAWQLREWSEQNNWLITSEAILREDNKVYEI-----MVLAPSEK-----PVTWTKQEI--------------------FFGPCLLKEQSAIFKSKWR---------------HEANTWQNIIQTISNNQPV--------------STENQAKIR-E-LEHKIALVEDVLK-----------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 84.3695% -44 - C2 -3GNL - ? A:[9-240] -------------------------------------------EEQLS--KRLEKVASYIT--KNERIA------DIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIE-KKDAIDTIVIAGM--------------------------GG----TL----I------------RTILEEGAAKLAGVTKLILQP---N--I--------AAWQLREWSEQNNWLITSEAILREDNKVYEI-----MVLAPSEK-----PVTWTKQEI--------------------FFGPCLLKEQSAIFKSKWR---------------HEANTWQNIIQTISNNQPV--------------STENQAKIR-E-LEHKIALVEDVLK-----------------------------------------------------------------------------------------------------------
26 HHSearch 83.0444% -90 - C2 -3KR9 - ? A:[1-221] ---------------------------------------------MIS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-------KLSASDV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFALGQIPEKNLE--------------------ERQ-V-LVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 81.0044% -96 - C2 -3KR9 - ? A:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFALGQI---------------------PEKNLEER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 79.5444%-105 - C2 -3KU1 ? D:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFAL-----------------------------EER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 79.2944%-103 - C2 -3KU1 ? C:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFAL-----------------------------EER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
47 Fugue 79.2890% -34 - C2 -3GNL - ? A:[9-242] -------------------------------------------EEQLS--KRLEKVASYIT--KNERIA------DIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLT----EQIDVRKGNGLAVIE-KKDA-IDTIVIAGM-------------------------GG----TL----I------------RTILEEGAAKLAGVTKLILQP---N--I--------AAWQLREWSEQNNWLITSEAILREDNKVYEIM----VLAPSEK------PVTWTKQEI--------------------FFGPCLLKEQSAIFKSKWR---------------HEANTWQNIIQTISNNQPV--------------STENQAKIR-E-LEHKIALVEDVLKEG---------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 79.0644%-100 - C2 -3KU1 ? H:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFAL-----------------------------EER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 78.9544%-101 - C2 -3KU1 ? G:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFAL-----------------------------EER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 78.5444%-104 - C2 -3KU1 ? B:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFAL-----------------------------EER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 78.0244%-100 - C2 -3KU1 ? A:[2-221] ----------------------------------------------IS--KRLELVASFVS--QGAILL------DVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLK----EKIQVRLANGLAAFE-ETDQVSVITIAGM--------------------------GG----RL----I------------ARILEEGLGKLANVERLILQP---N--N--------REDDLRIWLQDHGFQIVAESILEEAGKFYEI-----LVVEAGQM-----KLSAS--DV--------------------RFGPFLSKEVSPVFVQKWQ---------------KEAEKLEFAL-----------------------------EER-QVLVDKIQAIKEVL------------------------------------------------------------------------------------------------------------
48 Fugue 53.1123% -42 - C2 -4QPP ANM6_HUMAN A:[48-376] --------------------------------YYECYSDVSVHEEMIADRVRTDAYRLGIL--RNWAALRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEA-SAIWQQAREVVRFNGLE----DRVHVLPGP-VETVE-LPEQVDAIVSEWM--------------------------GY----GL----LHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQ--M--------LEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVL-LRYKVGDQEEKTKDFAMED-----------------------------------------------------------------------------------------------------
34 HHSearch 50.7317% -59 - C2 -1L3I CBIT_METTH A:[32-157] ------------------------------------------------------------G--KNDVAV------DVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLG----DNVTLMEGDAPEALC-KIPDIDIAVVGGS--------------------------GG-----E----L------------QEILRIIKDKLKPGGRIIVTA---I--LLE------TKFEAMECLRDLGFDVNIT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50 Fugue 50.3319% -63 - C2 -4Y2H ANM6_HUMAN B:[1-352] SIAAEREAALERPRRTKRERDQLYYECYSDVSVHEEMIADRVRTDAYR--LGILRNWAAL---RGKTVL------DVGAGTGILSIFCAQAG-ARRVYAVEA-SAIWQQAREVVRFNGLE----DRVHVLPGP-VETVE-LPEQVDAIVSEWM--------------------------GY----GL----L------------HESM----------------L---S--S--------VLHARTKWLKEGGLLLPASAEL----FIAPI-----SDQMLEWR-----LGFWSQVKQ--------------------HYGV----DMSCLEGFATR---------------CLMGHSEIVVQGLSGEDVL--------------A--RPQRFA-Q-LELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED
35 HHSearch 48.6216% -50 * C2 *2B3T PRMC_ECOLI A:[109-258] ---------------------------------------------------------------QPCRIL------DLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-----KNIHILQSDWFSALA-GQ-QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGM---AD----I------------VHIIEQSRNALVSGGFLLLEH---G--WQ-------QGEAVRQAFILAGYHDV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 48.0114% -53 - C2 -3A27 TYW2_METJA A:[115-246] ---------------------------------------------------------FISN--ENEVVV------DMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-----NVIPILADNRDVEL-KD-VADRVIMGYV--------------------------H------K----T------------HKFLDKTFEFLKDRGVIHYHE---T--VAEKIMYERPIERLKFYAEKNGYKLI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 47.8614% -42 - C2 -3TM4 ? A:[217-357] ---------------------------------------------------------------DGGSVL------DPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVL----DKIKFIQGDATQLSQ-YVDSVDFAISNLP--------------------------YGSMIPDL----Y------------MKFFNELAKVLEKRGVFITTE----------------KKAIEEAIAENGFEIIHHRVIGHGGL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 HHSearch 46.4714% -57 - C2 -3JWG ? A:[15-147] -----------------------------------------------Q--QRLGTVVAVLKSVNAKKVI------DLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFS-GYDAATVIEV--------------------------IE----HLDENRL------------QAFEKVLFEFTRPQTVIVSTP---N------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39 HHSearch 46.1414% -57 - C2 -3E05 ? A:[40-168] ---------------------------------------------------------------DDLVMW------DIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVAR-----NVTLVEAFAPEGLD-DLPDPDRVFIGGS--------------------------GG-----M----L------------EEIIDAVDRRLKSEGVIVLNA---V--TLD------TLTKAVEFLEDHGYMVEVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 45.8816% -43 - C2 -2NXC - PRMA_THET8 A:[115-241] --------------------------------------------------------ARHLR--PGDKVL------DLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAKRNGV------RPRFLEGSLEAALP-FG-PFDLLVANL---------------------------YA----EL----H------------AALAPRYREALVPGGRALLTG---ILKD--------RAPLVREAMAGAGFRPLEE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------