@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1466: (2016-03-25 )
VKLAKKWRDWYIESGKKYLFPLLLVCFAVIAYFLVCQMTKPESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISDEVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLVSLFMLFIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQNDATSGITIFILLSGATSVVMLRDYSRRSAIMLSGFMVGLINMIYVLLLLLINNSTLLQVSTLMALGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPNHPLLKKILMKAPGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQGINPHDRLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........------20........30.....--...40-........50........60........70........80........90........100.......110......--.120.......130.......140.......150....--...160.......170...-....180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.....-..290.......300.----......310.......320-----........330.......340.......350......------.360.......370....-...380.......390....-...400....-----...410.......420.......430.......440----.........-450....--...460.......470...-----------....480.......490-------------......-..500.......510....--...520.......530----.-..----......540.......550.......560.---...-..--.--570......--.580..------------.....590--------.-..-.-------.----....600.......610...--....620.......630.......640.......650.....--..660...-....670...---------....680.......690.......700.......710......-------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKLAKKWRDWYIESGKKYL------FPLLLVCFAVIAYFLVC--QMTKP-ESYNVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFAYVNEVNAEAQEKDTKN--KEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITS--NISDEVFTTLIEAKSKDFN-VMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYYKNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYRQLKMLHLLDQK-MPVKQYAGFAIFIIAL----AAILFLYTKKQTQPKAKK------MQTMLIFSSVYLVSLFMLFIILFLETQNIANIAFLFP------AAFAPMILKILLNEKYAF-LSVIFIAVTSLLTFQNDATS-GITIFILLSG-----ATSVVMLRDYSRRSAIMLSGFMVGLINMIYVLLL------LLINNSTLL-QVSTLMA--LGYAFLGGFGAFILGVGVI-----------PLFETIFGLLTTSRLV--------------ELANPN-HPLLKKILMKAPGTYHHSM--MVANLAEACADKIG------A-NS----LLVRVGCFYHDIGKTLRPPYFVENQLQGIN---PHD-RL--T--PEQSRDIIL--SHTKDG------------AEILKE----------N-HM-P-------Q----PIIDIALQHHGTTLLKYFYF--KAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKD---------RFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD-------
10 PsiBlast_CBE 98.68100% -73 - C3 -4S1B ? D:[1-214] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANPN-HPLLKKILMKAPGTYHHSM--MVANLAEACADKIG------A-NS----LLVRVGCFYHDIGKTLRPPYFVENQLQGIN---PHD-RL--T--PEQSRDIIL--SHTKDG------------AEILKE----------N-HM-P-------Q----PIIDIALQHHGTTLLKYFYF--KAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKD---------RFLDGQFTECDITIQEIKIIRDTLIATLNGIY------------------
1 PsiBlast_PDB 95.83100% -72 - C3 -4S1B ? A:[5-220] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPLLKKILMKAPGTYHHSM--MVANLAEACADKIG------A-NS----LLVRVGCFYHDIGKTLRPPYFVENQ---IN---PHD-RL--T--PEQSRDIIL--SHTKDG------------AEILKE----------N-HM-P-------Q----PIIDIALQHHGTTLLKYFYF--KAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKD---------RFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQY------------
37 Fugue 95.5799% -72 - C3 -4S1B ? A:[5-220] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPLLKKILMKAPGTYHHSM--MVANLAEACADKIG------A-NS----LLVRVGCFYHDIGKTLRPPYFVENQI---N---PHD-RL--T--PEQSRDIIL--SHTKDG------------AEILKE----------N-HM-P-------Q----PIIDIALQHHGTTLLKYFYF--KAKETNPDVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKD---------RFLDGQFTECDITIQEIKIIRDTLIATLNGIYHQRIQY------------
9 PsiBlast_CBE 95.43100% -72 - C3 -4S1C ? A:[4-215] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N-HPLLKKILMKAPGTYHHSM--MVANLAEACADKIG------A-NS----LLVRVGCFYHDIGKTLRPPYFVENQLQGIN---PHD-RL--T--PEQSRDIIL--SHTKDG------------AEILKE----------N-HM-P-------Q----PIIDIALQHHGTTLLKYFYF--KAKE----VKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKD---------RFLDGQFTECDITIQEIKIIRDTLIATLNGIYH-----------------
2 PsiBlast_PDB 94.84100% -73 - C3 -4S1C ? D:[4-215] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N-HPLLKKILMKAPGTYHHSM--MVANLAEACADKIG------A-NS----LLVRVGCFYHDIGKTLRPPYFVENQLQGIN---PHD-RL--T--PEQSRDIIL--SHTKDG------------AEILKE----------N-HM-P-------Q----PIIDIALQHHGTTLLKYFYF--KAK----DVKEADYRYSGPKPQTKEIAIINISDSVEAAVRSS--TEPTMAKI-TEIIDGIIKD---------RFLDGQFTECDITIQEIKIIRDTLIATLNGIYH-----------------
40 Fugue 68.0114% -73 - C3 -3TM8 ? A:[20-328] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMDYVS-IRVSTLRGDQKIDFNAYVKI-NDKMILYLRRGDSFEGERLKRLKDKKLRKMYILTDEENSYRTYLQKNIE------TAYDDTTGKDIQTRADI--IQGSQQNNAEEVFENPENV-----------ESYNYCKDAAGKYVNF--------------IMSNAQALSAVMNIENTDKTISHHGV--TVSTLSIALAQKLGITDP--K-KT----QLLTLGALLHDYGHHHSPL-------NLNQ---PLD-SM--S---PEDLALWK--KHPIEG------------AQKVQDK---------K-HF-D-------Q----TVINIIGQHE---------------ETINGTGPKGLREKDMDPLAVLVSSANAMDRLITFEGVP--KAEAAKKL-MIDHVGKHPL---------QHIQHLNDILKGL-------------------------------------
14 HHSearch 53.8023% -28 - C3 -3TM8 ? A:[159-327] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIENTDKTISHHGV--TVSTLSIALAQKLG------I-TDPKKTQLLTLGALLHDYGHHHSPLN-------LNQ---PLD-SM--S--PEDL-ALWK--KHPIEG------------AQKVQD----------KKHF-D-------Q----TVINIIGQHEETING-TG-P--KGLRE-KDM-------------DPLAVLVSSANAMDRLITFE--GVP----K-AEAAKKLMID-----------HVGKHPL---------QHIQHLNDILKG--------------------
43 Fugue 51.1914% -42 - C1 -3W3W IMB3_YEAST A:[3-1077] ALPEEVNRTLLQIVQAFASDNQIRSVAEKALSEEWITENNIEYLLTFLAEQAAFSQDTTVAALSAVLFRKLALKAPITHIRKEVLAQIRSSLLKGFLSERADSIRHKLSDAIAECVQDDLPAWPELLQALIESLKSGNPNFRESSFRILTTVPYLITAVDINSILPIFQSGFTDASDNVKIAAVTAFVGYFKQLPKSEWSKLGILLPSLLNSLPRFLDDGKDDALASVFESLIELVELAPKLFKDMFDQIIQFTDMVIKNKDLEPPARTTALELLTVFSENAPQMCKSNQNYGQTLVMVTLIMM-TEVSIDDDDAAEWIESDDTDDEEEVTYDHARQALDRVALKLGGEYLAAPLFQYLQQMITSTEWRERFAAMMALSSAAEGCADVLIGEIPKILDMVIPLINDPHPRVQYGCCNVLGQISTDFSPFIQRTAHDRILPALISKLTSECTSRVQTHAAAALVNFSEFAS-KDILEPYLDSLLTNLLVLLQSNKLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLLLNVLKVNSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNSDALRSYLEQSWSRICRILGDDFVPLLPIVIPPLLITAKATQDVGLIEEEEAANFQQYPDWDVVQVQGKHIAIHTSVLDDKVSAMELLQSYATLLRGQFAVYVKE-----VMEEIALPSLDFYLHDGVRAAGATLIPILLSCLLAAEELVLLWHKASSK-LIGGLMSEPMPEITQVYHNSLVNGIKVMGDNCLSEDQLAAFTKGVSANLTDTYERMQDRDEYNEDFTDEDLLDEI-NKSIAAVLKTTNGHYLKNLENIWPMINTFLLEPIL------V-IF----ALVVIGDLIQYEQTASMKNAFIPKVTECLI---SPD-AR--I--RQAASYIIG--VCAQYAPSTYADVCIPTLDTLVQI----------V-DG-S-------K----LEENRSSTENASAAIAKILY--AYNSNIPDTYTANWFKTLPTITDKEAASFNYQFLSQVCAQSN---------I-SAVVDSVIQA---------LN-----ERSLTVISSVKKLLGFLPSSDAMAIFNR--YPADIMEKVHKWF
17 HHSearch 50.8617% -24 - C3 -2O08 ? A:[16-166] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEHRYQHTI--GVMETAIDLAKLYG------A-DQ----QKAELAAIFHDYAKFRDKNEMRTLIR-------EKL-SQ--Q--DILFYGDEL--LHAPCG------------AYYVREE---------V-GI-E-------DE---DVLQAIRFHTTGR---------------P-------------NMSLLEKIIFLADYIEPNR-----QFP--------GVEKVRTQ-----------AKTDLNG---------AIISSLVNTITFLL------------------
19 HHSearch 50.2819% -20 - C3 -3CCG ? A:[16-167] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGEKRYKHSL--GVMDTAVRLAGIYN------E-DT----EKARIAGLVHDCAKKLPGEKIIEI----CT---NEGYEL--G--DEDIRNSYL--LHGLAG------------RILAKK----------VIGIDD-------E----DVLNAIEFHTTG------RP----------------------NMSLLEKIIYIADYIEPGR-----EFK---G-----VDELRKA-----------ADEDLNK---------ALLMSFDNTIKFV-------------------
16 HHSearch 49.3117% 5 - C3 -2OGI ? A:[24-142] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDKRFNHVL--GVERAAIELAERYG------Y-DK----EKAGLAALLHDYAKELSDDEFLRLID-------K-Y-QPDPD--LKKW-GNNI--WHGLVG------------IYKIQED---------L-AIKD-------Q----DILAAIAKHTVG------S---------A-------------QMSTLDKIVYVADYIEHNR-----------------------------------------------------------------------------------
28 HHSearch 48.069% -34 - C3 -1U6Z PPX_ECOLI A:[318-497] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TASSLANQYHIDSEQAR--RVLDTTMQMYEQWREQQPKLA-HPQLE-ALLRWAAMLHEVGLNINHS------------------------------------GLHRHS------------AYILQN----------S-DL-PGFNQEQQL----MMATLVRYHRKAIKL-DDLPRFTLFKK-KQ-------------FLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDSHWTLR-------------FPHDWFSQNALVLLDLEKEQEYWEGVA----------------------
20 HHSearch 47.2920% -5 - C3 -3HC1 ? A:[116-290] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSTLWAHSL--GVARIAKLIAERTG------FLNP----VNVYVAGLLHDVGEVFINFFRGKEFSQVVTLV-DEE-KI--TFGQAEERLFGT--SHCEVG------------FALAKR----------W-SL-N-------E----FICDTILYHHDI----EAVP--Y-------------------KQAAIVAMVAFADEYCTLRRLG--F--EGHKP-VDSVRTLLENHPSWGVIRRSLGGSDFDE---------KLIVAELDS-----------------------
18 HHSearch 46.8210% -24 - C3 -3M1T ? A:[102-263] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLADFWGNTF--EVAIICQELAKRLG------T-LP----EEAFTCGILHSIGELLIVNGDPAVAATISAAVADGA-DR--N--LMEKELLGY--DNAEIG------------ALLAQS----------W-KF-T-------P----HLVKGIQFQNHPKSA-------------E-------------PYSKLAGMLAMAKQIAADWDKI--PDD---ER-TSWLAQINI-----------LAGIKVDL---------GGLAEKLAKM----------------------
27 HHSearch 45.8016% -0 - C3 -2DQB ? A:[73-204] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YRTRLTHTL--EVAQVSRSIARALG------L-NE----DLTEAIALSHDLGHPPFGHTGEH--------------VL--N--ALMQDHGGF--EHNAQA------------LRILTHLEVRYPGFRGL-NL-T-------Y----EVLEGIATHEA------------------------------GQGTLEAQVVDLSDAIAYAAHD---------------------------------------------------------------------------------
36 HHSearch 45.5814% -4 - C3 -2QGS ? A:[23-129] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGHDIAHVE--RVYNNACYIAKRENI-----T-DT----LVIELSSLLHDTVDSKLT----------------DE----------------I--LAYDQL------------KQFLST----------L-DL-S-------SEISQQVLYIIKHMS-----------------------------HV-KLSIDGEIVRDADRLDAIG-----------------------------------------------------------------------------------
5 PsiBlast_PDB 45.0031% 15 - C3 -3TMC ? A:[169-260] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHGV--TVSTLSIALAQKLGITDP--K-KT----QLLTLGALLHDYGHHHSPLNL--NQ--------PLD-SM--S--PE---DLALWKKHPIEG------------AQKVQDK---------K-HF-D-------Q----TVINIIGQHEET------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 44.9316% -1 - C3 -3DJB ? A:[22-140] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASGHDWYHIR--RVHKMAISLSEQEG------G-NR----FIIEMAALLHDVAD--LNES-------------------------------EE--AGMKKV------------SDWLEE----------L-HV-E-------EEESKHVLHIIANMS-----------------------------------IEGKLVQDADRLDALG-----------------------------------------------------------------------------------
11 PsiBlast_CBE 44.8931% 18 - C3 -3TMC ? B:[169-260] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHGV--TVSTLSIALAQKLGITDP--K-KT----QLLTLGALLHDYGHHHSPLNL--NQ--------PLD-SM--S--PE---DLALWKKHPIEG------------AQKVQDK---------K-HF-D-------Q----TVINIIGQHEET------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_CBE 44.7931% 15 - C3 -3TM8 ? B:[169-260] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHGV--TVSTLSIALAQKLGITDP--K-KT----QLLTLGALLHDYGHHHSPLNL--NQ--------PLD-SM--S--PE---DLALWKKHPIEG------------AQKVQDK---------K-HF-D-------Q----TVINIIGQHEET------------------------------------------------------------------------------------------------------------------------------------