@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1477: (2016-03-25 )
MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAKVKRVVMTSNFGAIGFSNADKNSITTEAYWTDELAKGLSAYEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD

Atome Classification :

(20 SA) .........10........20........30........40........50........60.....----...70........80........90........100.......110....---.-..120.......130-.-..-...--.--140-----......--.---.150..-.----.--...160.......170.---......180.......190...-----....200.......210..-..-------....220........230.......240.......250.......260.......270.......280.......290.......300.......310.......320........330.......340-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSK----DEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEA---K-VKRVVMTSNFGAIGF-S-NA-DKN--S--IT------TEAYWT--D---ELAKGL-S----A--YEKSKLIAEKEAWKFME---NETELEFATINPVAIFGPSQSN-----HVSGSFDLLKNLLNGS-MK-RV-------INIPL-NVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKP-ISTKEEAVLAAVDSLAKYGLLD-
172 Fugue 94.5028% -85 - C3 -4QTZ - ? A:[1-321] LGNVVCVTGASGYIASWLVRLLLHRGYTVKATVRDPNDPKKVDHLVKLDGAKER--LQLFKANLLE----EGAFDSVVQGCHGVFHTASPFYHDVKDPQAELIDPALKGTLNVLNSCAKS---PSLKRVVLTSSIAAVAY-N-GK-PRT--PDVVV------DETWFTDAD---FCAKSN-L----W--YVVSKTLAEEAAWKFVK---EN-NIDMVTINPAMVIGPLLQP-----VLNTSAAAILNLINGA--Q-TF-------PNASF-GWVNVKDVANAHILAYENASASGRHCLV--ERVAHYSEVVRILRELYPSL--QLPEKCADDKPYVPI-----------------YQVSKEKAKS-LGL-E-YTPLEVSIKETVESLKEKKFANL
3 PsiBlast_PDB 92.1231% -92 * C2 *4PVC - GRE2_YEAST A:[2-291] ---SVFVSGANGFIAQHIVDLLLKEDYKVIGSARSQEKAENLTEAFGNNPKFSME----VVPDISKLDAFDHVFQKHGKDIKIVLHTASPFCFDITDSERDLLIPAVNGVKGILHSIKKYAADS-VERVVLTSSYAAV-F-D-MA-KENDKS--LTFNEESWNPATWE--S---CQSDPV-N----A--YCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQMFDKDVKKHLNTSCELVNSLMHLS-PEDKI-------PELFG-GYIDVRDVAKAHLVAFQKRETIGQRLIVS-EARFTMQDVLDILNEDFPVLKGNIP---------------------------------------------------------------------
22 PsiBlast_CBE 91.0831% -88 - C2 -4PVD GRE2_YEAST B:[2-291] ---SVFVSGANGFIAQHIVDLLLKEDYKVIGSARSQEKAENLTEAFGNNPKFSME----VVPDISKLDAFDHVFQKHGKDIKIVLHTASPFCFDITDSERDLLIPAVNGVKGILHSIKKYAADS-VERVVLTSSYAAV-F-D-MA-KENDKS--LTFNEESWNPATWE--S---CQSDPV-N----A--YCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQMFDKDVKKHLNTSCELVNSLMHLS-PEDKI-------PELFG-GYIDVRDVAKAHLVAFQKRETIGQRLIVS-EARFTMQDVLDILNEDFPVLKGNIP---------------------------------------------------------------------
4 PsiBlast_PDB 90.7331% -87 - C2 -4PVD GRE2_YEAST A:[2-291] ---SVFVSGANGFIAQHIVDLLLKEDYKVIGSARSQEKAENLTEAFGNNPKFSME----VVPDISKLDAFDHVFQKHGKDIKIVLHTASPFCFDITDSERDLLIPAVNGVKGILHSIKKYAADS-VERVVLTSSYAAV-F-D-MA-KENDKS--LTFNEESWNPATWE--S---CQSDPV-N----A--YCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQMFDKDVKKHLNTSCELVNSLMHLS-PEDKI-------PELFG-GYIDVRDVAKAHLVAFQKRETIGQRLIVS-EARFTMQDVLDILNEDFPVLKGNIP---------------------------------------------------------------------
31 PsiBlast_CBE 90.0131% -91 - C2 -3BXX DFRA_VITVI B:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
155 HHSearch 89.3529% -87 - C3 -2RH8 ? A:[9-336] -KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQK-KVSHLLEL--QELGDLKIFRADLTD----ELSFEAPIAGCDFVFHVATPVHF---------IKPAIQGVVNVMKACTRAK--S-VKRVILTSSAAAVTI-N-QLDGTG--L--VV------DEKNWT--D---I--PPT-W----G--YPASKTLAEKAAWKFAE---E-NNIDLITVIPTLMAGSSLTS-----DVPSSIGLAMSLITGNEFL-INGMKGMQMLSGSV-SIAHVEDVCRAHIFVAEKESA-SGRYIC-CAANTSVPELAKFLSKRYPQYK--VPTDFG-D--------FP----P-----KSKLIISSEKLVK-EGFSFKYGIEE-IYDESVEYFKAKGLL--
23 PsiBlast_CBE 89.2332% -99 - C2 -4R1S ? B:[13-270] ----VCVTGAGGFIASWLVKILLEKGYTVRGTVRN-PDDPKNGHLRELEGAKE--RLTLCKADLLD----YQSLREAINGCDGVFHTASPVT----DDPEQMVEPAVIGTKNVINAAAEA---N-VRRVVFTSSIGAVYMDP-NR-DPE--T--VV------DETCWS--DP--DFCKNTKN----W--YCYGKMVAEQAAWEEAK----EKGVDLVVINPVLVQGPLLQT-----TVNASVLHILKYLTGS-AK-TY-------ANSVQ-AYVDVKDVALAHILLYETPEASG-RYLC-AESVLHRGDVVEILSKFFPE---------------------------------------------------------------------------
30 PsiBlast_CBE 88.3631% -85 - C2 -3BXX DFRA_VITVI C:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
28 PsiBlast_CBE 88.1831% -84 - C2 -3BXX DFRA_VITVI E:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
27 PsiBlast_CBE 88.0831% -89 - C2 -3BXX DFRA_VITVI F:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
32 PsiBlast_CBE 87.7331% -92 - C2 -2NNL DFRA_VITVI F:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
8 PsiBlast_PDB 87.7231% -90 - C2 -2NNL DFRA_VITVI D:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
34 PsiBlast_CBE 87.6331% -87 - C2 -2IOD DFRA_VITVI C:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
25 PsiBlast_CBE 87.6331% -87 - C2 -3C1T DFRA_VITVI C:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
12 PsiBlast_PDB 87.3829%-112 - C2 -4R1U ? A:[30-294] ----VCVTGAGGFIASWLVKLLLERGYTVRGTVRNPEDP-KNGHLKELEGARE--RLTLHKVDLLD----LQSIQSVVHGCHGVFHTA----------PDEMLEPAVNGTKNVIIASAEA---K-VRRVVFTSSIGTVYM-DPNT-SRD--V--VV------DESYWS--DL--EHCKNTKN----W--YCYGKTVAEQSAWDIAK----ENQVDLVVVNPVVVLGPLLQP-----TINASTIHILKYLNGA-AK-TY-------VNATQ-SYVHVKDVALAHLLVYETNSASG-RYIC-CETALHRGEVVEILAKYFPEY--PLPTKC------------------------------------------------------------------
36 PsiBlast_CBE 87.3731% -89 - C2 -2C29 ? F:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
35 PsiBlast_CBE 87.2331% -89 - C2 -2IOD DFRA_VITVI B:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPM---SKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
26 PsiBlast_CBE 87.2331% -89 - C2 -3C1T DFRA_VITVI B:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPM---SKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
29 PsiBlast_CBE 87.1731% -87 - C2 -3BXX DFRA_VITVI D:[7-273] ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLAD----EGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAA---KTVRRLVFTSSAGTVNI-Q-E--HQL--P--VY------DESCWS--DMEFCRAKKM-T----AWMYFVSKTLAEQAAWKYAK----ENNIDFITIIPTLVVGPFIMS-----SMPPSLITALSPITGN-EA-HY-------SIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE---------------------------------------------------------------------------
171 Fugue 87.1327% -75 - C3 -2P4H - VESTR_MEDSA X:[5-326] -KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADRDVSFLTNL---PGASEK--LHFFNADLSN----PDSFAAAIEGCVGIFHTASPI--------EIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSF-N-GK-DKD--V--LD------ESDWSD--V---DLLRSV-KPFGWN--YAVSKTLAEKAVLEFGE---Q-NGIDVVTLILPFIVGRFVCP-----KLPDSIEKALVLVLGK-KE-QI-------GVTRF-HMVHVDDVARAHIYLLENSVPGG-RYNCS-PFIVPIEEMSQLLSAKYPEY--QILTV------------DELKEIKGAR----LPDLNTKKLVD-AGFDF-KYTIEDMFDDAIQCCKEKGYL--