@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1544: (2016-03-26 )
MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQMVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLLEKEDIEPPKLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDPVAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK

Atome Classification :

(21 SA) .........10........20........30........40........50........60........70........80.....---...90....-....100.......110.--.......120.......130.......140.......150.......160---....--------...--------.---.170...-....180..-.....190....-------...200.......210......-.220-.......230.......240.......250..-.....260....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLRNLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFL---LPAAQTTDK-NAVSGEQMVDLINQLR-P--DYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLL-----EKED--------IEP--------P---KLIINRI-RTQMMMNGD-VMDIDEITTHLS-------IELLGIIIDDDEVIRSSNSGDP-VAML-PNNRASQGYRNIARRILGESIPLMSIETKKAG-FFARLKQLFSGK
115 Fugue 94.6644%-101 - C2 -3Q9L MIND_ECOLI A:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLKAM--DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL-----ASKS--------RRAENGEEPIKE---HLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
23 PsiBlast_CBE 94.6444%-110 - C2 -3R9J MIND_ECOLI B:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKS---------------E--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
4 PsiBlast_PDB 94.6444%-105 - C2 -3R9I MIND_ECOLI A:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEN--------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
5 PsiBlast_PDB 94.4844%-110 - C2 -3R9J MIND_ECOLI A:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILAS---------------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
26 PsiBlast_CBE 94.3344%-108 - C2 -3R9I MIND_ECOLI B:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTR----ALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEN--------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
125 HHSearch 94.3245% -98 * C2 *3Q9L MIND_ECOLI A:[2-254] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLKAM--DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL-----ASKSRRAENGEEPIK--------E---HLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFR---------------------
24 PsiBlast_CBE 93.9444%-106 - C2 -3R9I MIND_ECOLI D:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEN--------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
3 PsiBlast_PDB 93.8344%-104 - C2 -3Q9L MIND_ECOLI A:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEN--------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
25 PsiBlast_CBE 93.6744%-110 - C2 -3R9I MIND_ECOLI C:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTR----ALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEN--------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
27 PsiBlast_CBE 93.6044%-104 - C2 -3Q9L MIND_ECOLI B:[2-258] -ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTEN-LYI---LPASQTRDK-DALTREGVAKVLDDLK-AM-DFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKSRRAEN--------GEE--------PIKEHLLLTRY-NPGRVSRGD-MLSMEDVLEILR-------IKLVGVIPEDQSVLRASNQGEP-VILD-INADAGKAYADTVERLLGEERPFRFIEE-----------------
1 PsiBlast_PDB 93.2851%-117 - C2 -4V03 ? A:[2-246] -AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSL-WL---LP---------VIDIEKWNKTVEEIK-NSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLL-----ESMD--------KRN--------Y---KVIVNRI-KWEMVKRGA-MLSVEDIVDILK-------AEIIGIIPEEPKLVDFTNRGEP-IVLD-EKFPASQAIIDTARRLMGESIPL----------------------
2 PsiBlast_PDB 93.0950%-113 - C2 -4V02 ? A:[2-246] -AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAAIGLRNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSL-WL---LPA-------DVIDIEKWNKTVEEIK-NSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLL-----ESMD--------KRN--------Y---KVIVNRI-KWEMVKRGA-MLSVEDIVDILK-------AEIIGIIPEEPKLVDFTNRGEP-IVLD-EKFPASQAIIDTARRLMGESIPL----------------------
21 PsiBlast_CBE 91.9151%-116 - C2 -4V03 ? B:[2-246] -AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAD---RNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSL-WL---LPA--------VIDIEKWNKTVEEIK-NSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLL-----ESMD--------KRN--------Y---KVIVNRI-KWEMVKRGA-MLSVEDIVDILK-------AEIIGIIPEEPKLVDFTNRGEP-IVLD-EKFPASQAIIDTARRLMGESIPL----------------------
22 PsiBlast_CBE 90.4450%-112 - C2 -4V02 ? B:[2-246] -AEVIVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAAIGLRNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSL-WL---LPA--------VIDIEKWNKTVEEIK-NSGNYDYILVDSPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVIGLL-----ESMD--------KRN--------Y---KVIVNRI-KWEMVKRGA-MLSVEDIVDILK-------AEIIGIIPEEPKLVDFTNRGEP-IVLD-EKFPASQAIIDTARRLMGESIPL----------------------
127 HHSearch 77.5431%-102 - C2 -1G3Q ? A:[1-236] MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPD-VTLHDVLAGEANVEDAIYMT-QFDN-VYV---LPGAVDWEHVLKADPRKLPEVIKSLK-D--KFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVL-----KKAG--------LAI--------L---GFVLNRY-GRSDRD-----IPPEAAEDVME-------VPLLAVIPEDPAIREGTLEGIP-AVKYKPESKGAKAFVKLAEEIEKL--------------------------
8 PsiBlast_PDB 76.9431%-101 - C2 -1G3R ? A:[1-233] MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVT-LHDVLAGEANVEDA-IYMTQFDNVYVL---PGAVDWEHV-LKADPRKLPEVIKSLK-D--KFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVL-----KKAG--------LAI--------L---GFVLNRYGRSDRDIPPE-AAE-----DVME-------VPLLAVIPEDPAIREGTLEGIPAVKYK-PESKGAKAFVKLAEEI-----------------------------
7 PsiBlast_PDB 76.6831%-102 - C2 -1G3Q ? A:[1-233] MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLGVDDPDVT-LHDVLAGEANVEDA-IYMTQFDNVYVL---PGAVDWEHV-LKADPRKLPEVIKSLK-D--KFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVL-----KKAG--------LAI--------L---GFVLNRYGRSDRDIPPE-AAE-----DVME-------VPLLAVIPEDPAIREGTLEGIPAVKYK-PESKGAKAFVKLAEEI-----------------------------
10 PsiBlast_PDB 76.4530%-105 - C2 -4RZ2 - ? A:[33-292] ----IAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMDIGMGNIDILLGESSSLA--LADWFSARLPLSE-LVKSGP-EHLSYIAGGTGAAQWQGL-DTASIDRFLTELQAVA-S--QYDYLIFDMGAGASGERLYFLKSVDDVFVVTTPEPTAMTDAYAMMKYM-----HAAG--------SEA--------PF--SVIVNRA-GKER----E-GYEVFERLKHVTGRFLNKDIALLGIIPEDRTVARAVVSQTP-FVLLDPAAKASKAVRQMAFRY----AP----------RFFAKLRQLF---
124 HHSearch 75.8833% -97 - C2 -1HYQ - ? A:[2-233] -VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLP-VTLQNVLAGEARIDEAIYV--GPGG-VKV---VPAGVSLEGLRKANPEKLEDVLTQIM-E--STDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTKIVA-----ERLG--------TKV--------L---GVVVNRI-TTLGIE-----MAKNEIEAILE-------AKVIGLIPEDPEVRRAAAYGKP-VVLRSPNSPAARAIVELANYIA----------------------------
9 PsiBlast_PDB 74.8532% -98 - C2 -1ION ? A:[5-233] ----ISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDDVNI-TLHDVLAGDAKLEDA-IYMTQFENVYIL---PGAVDWEHV-IKADPRKLPEVIKSLK-G--KYDFILIDCPAGLQLRAMSAMLSGEEAILVTNPEISCLTDTMKVGMVL-----KKAG--------LAI--------L---GFILNRYGRSERDIPPEAAQDVMDVP-------------LLAVIPEDPVIREGTLEGIPAVKYK-PESKGAQAFIKLAEEV-----------------------------
11 PsiBlast_PDB 74.1430% -98 - C2 -4RZ3 ? A:[33-272] ----IAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMAIGMGNIDILLGESSSLA--LADWFSARLPLSE-LVKSGP-EHLSYIAGGTGAAQWQGL-DTASIDRFLTELQAVA-S--QYDYLIFDMGAGASGERLYFLKSVDDVFVVTTPEPTAMTDAYAMMKYM-----HAAG--------SEA--------PF--SVIVNRA-GKER----E-GYEVFERLKHVTGRFLNKDIALLGIIPEDRTVARAVVSQTP-FVLLDPAAKASKAVRQMAFRY----AP-----------------------