@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1554: (2016-03-26 )
MKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPKTEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFGIPAEKDAVGTQAYHDHGIIQEATRLIKKSFPKILVVADTCLCEFTDHGHCGVIENGEILNDESLELLKQTAVSQAAAGADIIAPSNMMDGFVQVIREGLDEAGFYDIPIMSYAVKYASAFYGPFRDAAGSAPQFGDRKSYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKNNTNLPVVAYNVSGEYAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK

Atome Classification :

(36 SA) .........10........20-........30........40........50........60........70........80--.--.---..--....-.90........100.......110.......120.......130.-.-.-....140.......150.......160.......170.......180..-.-.-...190.......200.......210..--.--....220.......230.......240.......250.......260-.-.-.....270.......280.......290.......300.......310.......320..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKNQFDRHRRLRKTKTMRDLV-RETVLHTDDLIYPIFVKDGKEPKTEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFG---I--P---AE--KDAV-GTQAYHDHGIIQEATRLIKKSFPKILVVADTCLCEFTDHGHCGVI-E-N-GEILNDESLELLKQTAVSQAAAGADIIAPSNMMDGFVQVIREGLDEAGF-Y-D-IPIMSYAVKYASAFYGPFRDAAGSAPQF--G--DRKSYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKN-N-T-NLPVVAYNVSGEYAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK
7 PsiBlast_PDB 95.2748%-106 - C5 -1W5P HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAV-----------NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
13 PsiBlast_PDB 94.6847%-105 - C5 -2WOQ HEM2_PSEAE A:[12-333] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRIMAYSAKYASAYYGPFRDAVGSASNLGKG--NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQL--
48 HHSearch 94.6252%-103 * C5 *1W1Z HEM2_CHLP8 A:[10-328] ----VHRPRRLRRTAALRNLV-QENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFG---I--P---EQ--KTED-GSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLV-K-D-GIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDH-S-D-VGILSYAAKYASSFYGPFRDALHSAPQF--G--DKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKE-R-F-DVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKLR-
10 PsiBlast_PDB 94.1247%-105 - C5 -1W56 HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCPFTTHGQDGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAVGSASNLGKG--NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
24 PsiBlast_CBE 94.0248%-110 - C5 -1W5Q HEM2_PSEAE B:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFR--------------NRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
25 PsiBlast_CBE 93.9848%-108 - C5 -1W5P HEM2_PSEAE B:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAV-----------NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
9 PsiBlast_PDB 93.9747%-109 - C5 -1W5N HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALCPFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAVGS---------NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
11 PsiBlast_PDB 93.8747%-104 - C5 -1W5M HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLDPFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAVGSASNLGKG--NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
12 PsiBlast_PDB 93.8147%-103 - C5 -1B4K HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRIMAYSAKYASAYYGPFRDAVGSASNLGKG--NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
72 Fugue 93.7947%-105 - C5 -1B4K HEM2_PSEAE A:[10-335] -YPY-TRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VTPV---EK--KSLD-AAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDD-D-GYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRIMAYSAKYASAYYGPFRDAVGSASNL--GKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-EFR--APTFVYQVSGEYAMHMGAIQNGWLAE-SVILESLTAFKRAGADGILTYFAKQAAEQLRR
8 PsiBlast_PDB 93.6547%-105 - C5 -1W5O HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCPFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAVGSASNLGKG--NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
22 PsiBlast_CBE 93.3652%-104 - C5 -1W1Z HEM2_CHLP8 B:[24-327] ------------------NLV-QENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFG---I--P---EQ--KTED-GSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLV-K-D-GIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDH-S-D-VGILSYAAKYASSFYGPFRDALHSAPQF--G--DKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKE-R-F-DVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKL--
5 PsiBlast_PDB 93.3651%-100 - C5 -1L6Y HEM2_ECOLI A:[6-318] ------RPRRLRKSPALRAMF-EETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFG---I--S---HH--TDET-GSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVL-C-E-HGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGF-K-D-TAIMSYSTKFASSFYGPFREAAGSALK---G--DRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRE-R-T-ELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAE----
2 PsiBlast_PDB 93.1852%-105 - C5 -2C1H HEM2_CHLP8 A:[24-327] ------------------NLV-QENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFG---I--P---EQ--KTED-GSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLV-K-D-GIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDH-S-D-VGILSYAAKYASSFYGPFRDALHSAPQF--G--DKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKE-R-F-DVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKL--
14 PsiBlast_PDB 93.1646%-104 - C5 -1GZG HEM2_PSEAE A:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQNGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAVGSASNLGKG--NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
21 PsiBlast_CBE 93.0052%-104 - C5 -2C1H HEM2_CHLP8 B:[24-327] ------------------NLV-QENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFG---I--P---EQ--KTED-GSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLV-K-D-GIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDH-S-D-VGILSYAAKYASSFYGPFRDALHSAPQF--G--DKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKE-R-F-DVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKL--
26 PsiBlast_CBE 92.9547%-107 - C5 -1W5O HEM2_PSEAE B:[12-335] ----YTRLRRNRRDDFSRRLV-RENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFP---VT-P---VE--KKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCPFTTHGQCGIL-D-DDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGH-T-N-VRVMAYSAKYASAYYGPFRDAVGS---------NKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKD-E-F-RAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR
1 PsiBlast_PDB 92.2852%-106 - C5 -1W1Z HEM2_CHLP8 A:[24-327] ------------------NLV-QENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFG---I--P---EQ--KTED-GSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLV-K-D-GIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDH-S-D-VGILSYAAKYASSFYGPFRDALHSAPQF--G--DKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKE-R-F-DVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKL--
3 PsiBlast_PDB 92.0451% -96 - C5 -1B4E HEM2_ECOLI A:[6-318] ------RPRRLRKSPALRAMF-EETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFG---I--S---HH--TDET-GSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVL-K-E-HGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGF-K-D-TAIMSYSTKFASSFYGPFREAAGSALK---G--DRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRE-R-T-ELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAE----