@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1780: (2016-03-28 )
MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEIGMQEVTVDEFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINHPEIKHGKIRIAFTPDEEIGRGPERFDVEAFGAKYAYTMDGGPLGELEYESFNAASAKITFKGNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPEYTEGYEGFYHLISLNGDVEQARSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEIVDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGENFHGKFEYVALESMVKATEVIIEVARLFEEKE

Atome Classification :

(20 SA) ---.........10........20........30........40.....---...50...----------------------.------....60......-.--.70.........80-----........90.....--...100-----.....-..110......----.120-----------.-.-..--------.-....130..------.....140.......150..----.-....160-.......170.......180..--.......---190.-........----------200-.-----------.----.----.....210----------------....-----------------.....220-.--.......230..-.-....240-----.......250---------------..-----------------------------.--------------------------------.----------.-----.------------------.------------------------------------------------------260......------------.270---------.------.......280-----.-..--..-..-290....----..-----..300-----.---------------------------------------------------------....----------------------------.-.---310.......-320........330.-......340..-.-.--...-350-........-360..-.----.--...370.-.-.....-----.-.380-.......390.......400.......410
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEI---GMQEVTVD----------------------E------FGYVMATLPSNS-T--KE-VPVIGFLAHLD-----TATDLTGKNVQPQVH--ENYDGK-----DIILN-KDLNVVLSPKQ----FP-------------E-L-AG--------Y-KGKTLITTD------GTTLLGADDKAGITEIMVAM----N-HLINHPE-IKHGKIRIAFTPDEEIGR--GP--ERFDVEA---F--G-AKYAYTMD----------G-G-P-----------L----G----ELEYES------------------FNAA-----------------SAKITFK--G--NSVHPGTAKNKM-V-NAVKMAM-----EFDARIPKDE---------------AP-----------------------------E--------------------------------Y----------T-----E------------------G------------------------------------------------------YEGFYHLIS------------LNG----------D------VEQARSYYII-----R-DF--DH-LK-FV-ERKT----HI-----ASIAK-----E---------------------------------------------------------LEEK----------------------------Y-G---EGSVELKLND-QY-YNMREKIEPVKE-IVDIVSAAMRN-L-D--IEP-KI--SPIRGGTD-GAQLS-Y----K--GLPT--P-N-IFGGG-----E-NFHG-KFEYVALESMVKATEVIIEVARLFEEKE
1 PsiBlast_PDB 99.5472% -69 - C1 -3IFE PEPT_BACAN A:[25-433] ---MKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEV---GLTEVTMD----------------------D------NGYVMATLPANT-D--KD-VPVIGFLAHLD-----TATDFTGKNVKPQIH--ENFDGN-----AITLN-EELNIVLTPEQ----FP-------------E-L-PS--------Y-KGHTIITTD------GTTLLGADDKAGLTEIMVAM----N-YLIHNPQ-IKHGKIRVAFTPDEEIGR--GP--AHFDVEA---F--G-ASFAYMMD----------G-G-P-----------L----G----GLEYES------------------FNAA-----------------GAKLTFN--G--TNTHPGTAKNKM-R-NATKLAM-----EFNGHLPVEE---------------AP-----------------------------E--------------------------------Y----------T-----E------------------G------------------------------------------------------YEGFYHLLS------------LNG----------D------VEQSKAYYII-----R-DF--DR-KN-FE-ARKN----TI-----ENIVK-----Q---------------------------------------------------------MQEK----------------------------Y-G---QDAVVLEMND-QY-YNMLEKIEPVRE-IVDIAYEAMKS-L-N--IEP-NI--HPIRGGTD-GSQLS-Y----M--GLPT--P-N-IFTGG-----E-NYHG-KFEYVSVDVMEKAVQVIIEIARRFEEQ-
37 HHSearch 94.4968% -62 - C1 -3IFE PEPT_BACAN A:[26-433] ----KEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEV---GLTEVTMD----------------------D------NGYVMATLPANT-D--KD-VPVIGFLAHLD-----TATDFTGKNVKPQIH--ENFDGN-----AITLN-EELNIVLTPEQFPELPS-------------YKG-HTI-------ITTDGTTLLG-------A------DDKAGLTEIMVAM----N-YLIHNPQ-IKHGKIRVAFTPDEEIGR--GP--AHFDVEA---F--G-ASFAYMMD----------G-G-P-----------L----G----GLEYES------------------FNAA-----------------GAKLTFN--G--TNTHPGTAKNKM-R-NATKLAM-----EFNGHLPVEE---------------AP-----------------------------E--------------------------------Y----------T-----E------------------G------------------------------------------------------YEGFYHLLS------------LNG----------D------VEQSKAYYII-----R-DF--DR-KN-FE-ARKN----TI-----ENIVK-----Q---------------------------------------------------------MQEK----------------------------Y-G---QDAVVLEMND-QYYNMLE-KIEPVRE-IVDIAYEAMKS-L-N--IEP-NI--HPIRGGTD-GSQLS-Y----M--GLPT--P-N-IFTGG-----E-NYHG-KFEYVSVDVMEKAVQVIIEIARRFEEQ-
21 PsiBlast_CBE 92.5453% -70 - C1 -1VIX PEPT_ECOLI B:[4-410] -----DKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEM---GLINVTLS----------------------E------KGTLMATLPANV-P--GD-IPAIGFISHVD-----TSPDCSGKNVNPQIV--ENYRGG-----DIALG-IG-DEVLSPVM----FP-------------V-L-HQ--------L-LGQTLITTD------GKTLLGADDKAGIAEIMTAL----A--VLQQKK-IPHGDIRVAFTPDEEVGK--GA--KHFDVDA---F--D-ARWAYTVD----------G-G-G-----------V----G----ELEFEN------------------FNAA-----------------SVNIKIV--G--NNVHPGTAKGVM-V-NALSLAA-----RIHAEVPADE---------------SP-----------------------------E--------------------------------M----------T-----E------------------G------------------------------------------------------YEGFYHLAS------------MKG----------T------VERADMHYII-----R-DF--DR-KQ-FE-ARKR----KM-----MEIAK-----K---------------------------------------------------------VGKGL---------------------------H-P---DCYIELVIED-SY-YNMREKVVEHPH-ILDIAQQAMRD-C-D--IEP-EL--KPIRGGTD-GAQLS-F----M--GLPC--P-N-LFTGG-----Y-NYHG-KHEFVTLEGMEKAVQVIVRIAELTAQRK
2 PsiBlast_PDB 91.4753% -70 - C1 -1VIX PEPT_ECOLI A:[4-410] -----DKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEM---GLINVTLS----------------------E------KGTLMATLPANV-P--GD-IPAIGFISHVD-----TSPDCSGKNVNPQIV--ENYRGG-----DIALG-IG-DEVLSPVM----FP-------------V-L-HQ--------L-LGQTLITTD------GKTLLGADDKAGIAEIMTAL----A--VLQQKK-IPHGDIRVAFTPDEEVGK--GA--KHFDVDA---F--D-ARWAYTVD----------G-G-G-----------V----G----ELEFEN------------------FNAA-----------------SVNIKIV--G--NNVHPGTAKGVM-V-NALSLAA-----RIHAEVPADE---------------SP-----------------------------E--------------------------------M----------T-----E------------------G------------------------------------------------------YEGFYHLAS------------MKG----------T------VERADMHYII-----R-DF--DR-KQ-FE-ARKR----KM-----MEIAK-----K---------------------------------------------------------VGKGL---------------------------H-P---DCYIELVIED-SY-YNMREKVVEHPH-ILDIAQQAMRD-C-D--IEP-EL--KPIRGGTD-GAQLS-F----M--GLPC--P-N-LFTGG-----Y-NYHG-KHEFVTLEGMEKAVQVIVRIAELTAQRK
3 PsiBlast_PDB 90.2852% -69 - C1 -1FNO PEPT_SALTY A:[2-403] -----DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEM---GLVNITLS----------------------E------KGTLMATLPANV-E--GD-IPAIGFISHVD-----TSPDFSGKNVNPQIV--ENYRGG-----DIALG-IG-DEVLSPVM----FP-------------V-L-HQ--------L-LGQTLITTD------GKTLLGADDKAGVAEIMTAL----A-VLKGNP--IPHGDIKVAFTPDEEVGK--GA--KHFDVEA---F--G-AQWAYTVD----------G-G-G-----------V----G----ELEFEN------------------FNAA-----------------SVNIKIV--G--NNVHPGTAKGVM-V-NALSLAA-----RIHAEVPADE---------------AP-----------------------------E--------------------------------T----------T-----E------------------G------------------------------------------------------YEGFYHLAS------------MKG----------T------VDRAEMHYII-----R-DF--DR-KQ-FE-ARKR----KM-----MEIAK-----K---------------------------------------------------------VGKGL---------------------------H-P---DCYIELVIED-SY-YNMREKVVEHPH-ILDIAQQAMRD-C-H--ITP-EM--KPIRGGTD-GAQLS-F----M--GLPC--P-N-LFTGG-----Y-NYHG-KHEFVTLEGMEKAVQVIVRIAEL-----
34 HHSearch 85.9450% -58 - C1 -1FNO PEPT_SALTY A:[1-407] ----MDKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEM---GLVNITLS----------------------E------KGTLMATLPANV-E--GD-IPAIGFISHVD-----TSPDFS--GK---NV--NPQIVENYRGGDIALG-IGD-EVLSPVM---------------------------------F-PVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTAL----A-VLKGNPI--PHGDIKVAFTPDEEVGK--GA--KHFDVEA---F--G-AQWAYTVD----------G-G-G-----------V----G----ELEFEN------------------FNAA-----------------SVNIKIV--G--NNVHPGTAKGVM-V-NALSLAA-----RIHAEVPADE---------------AP-----------------------------E--------------------------------T----------T-----E------------------G------------------------------------------------------YEGFYHLAS------------MKG----------T------VDRAEMHYII-----R-DF--DR-KQ-FE-ARKR----KM-----MEIAK-----K---------------------------------------------------------VGKG----------------------------LHP---DCYIELVIED-SY-YNMRE-KVVEHPHILDIAQQAMRD-C-H--ITP-EM--KPIRGGTD-GAQLS-F----M--GLPC--P-N-LFTGG-----Y-NYHG-KHEFVTLEGMEKAVQVIVRIAELTAKR-
35 HHSearch 71.5226% -64 - C1 -3GB0 ? A:[5-372] ----QERLVNEFMELVQVDSETKFE----------AEICKVLTKKFTDL---GVE-VFEDDTMAVTGH--------------G------AGNLICTLPATK----DG-VDTIYFTSHMD-----TVVPGN--GI----------KP------SI---------------------------------------------------KDGYIVSD------GTTILGADDKAGLASMFEAI----R-VLKEKNI--PHGTIEFIITVGEESGLV-GA--KALDRER---I--T-AKYGYALD----------S-DGK-----------V----G----EIVVAA------------------PTQA-----------------KVNAIIR--G--KTAHAGVAPEKG-V-SAITIAA-----KAIAKMPLGR---------------I---------------------------------------------------------------------------------------------------D------------------------------------------------------SETTANIGR------------FEGGTQTNI----V------CDHVQIFAEA-----R-SL--IN-EK-ME-AQVA----KM-----KEAFE-----T---------------------------------------------------------TAKE----------------------------M-G----GHADVEVNV-MY-PGFK--FADGDH-VVEVAKRAAEK-I-G--RTP-SL--HQSGGGSD-ANVIA-G----H--GIPT--V-N-LAVGY-----E-EIHT-TNEKIPVEELAKTAELVVAIIEEVA---
36 HHSearch 70.3022% -51 * C1 *3RZA ? A:[23-394] ----EQRLLNTFLELVQIDSETGNE----------STIQPILKEKFIAL---GLD-VKEDEAAKHPKL--------------G------ANNLVCTMNSTI-E-----VPKLYLTSHMD-----TVVPA--IN-----V--KPIVK-----------------------------------------------------------DDGYIYSD------GTTILGADDKAGLAAMLEVL----Q-VIKEQQI--PHGQIQFVITVGEESGLI-GA--KELNSEL---L--D-ADFGYAID----------A-SAD-----------V----G----TTVVGA------------------PTQM-----------------LISAKII--G--KTAHAS-TPKEG-V-SAINIAA-----KAISRMKLGQ---------------VD---------------------------------------------------------------------------------------------------------------------------------------------------------EITTANIGK------------FHGGSATNI----V------ADEVILEAEA-----R-SH--DP-ER-IK-TQVK----HM-----TDVFE-----T---------------------------------------------------------TASE----------------------------L-G----GKAEVTVEQ-SY-PGFK--INDNEA-VVKIAQESARN-L-G--LSA-NT--IISGGGSD-GSIIN-T----F--GIPS--V-I-LGVGY-----E-KIHT-TNERMPIKSLNLLASQVLEIIKIVARQ-
5 PsiBlast_PDB 68.6624% -55 - C1 -3RZA ? A:[23-394] ----EQRLLNTFLELVQIDSETGNESTIQP----------ILKEKFIAL---GL-DVKED----------------------EAAKHPKLGANNLVCTMNS-TIE---VPKLYLTSHMD-----TV--VPAINVKPIVK--DD--------------------------------------------------G--------Y------IYSD------GTTILGADDKAGLAAMLEVL------QVIKEQQ-IPHGQIQFVITVGEESGLI-GA--KELNSEL---L--D-ADFGYAIDASADVGTTVVG-A-P-----------T----Q----ML-------------------------I-----------------SAKII----G--KTAHASTPK-EG-V-SAINIAA-----KAISRMKLGQ---------------VD-----------------------------E--------------------------------I----------T-----T------------------A------------------------------------------------------NIGKFH----------------GG----------S------ATNIVADEVILEAEAR-SH--DP-ER-IK-TQVK----HM-----TDVFE-----T---------------------------------------------------------TASE----------------------------L-G----GKAEVTVEQ-SY-PGF--KINDNEA-VVKIAQESARN-L-G--LSA-NT--IISGGGSD-GSIIN-T----F--GIPS--V-I-LGVGY-----E-KIHT-TNERMPIKSLNLLASQVLEIIKIVARQ-
4 PsiBlast_PDB 66.2525% -45 - C1 -3GB0 ? A:[5-367] ----QERLVNEFMELVQVDSETKFEAEICKVLTKKF---TDLGVEVFED---DTMAVTGH----------------------G------AGNLICTLPA---T--KDGVDTIYFTSHMD-----TV--VPGNGIKPSIK--DGY-----------------------------------------------------------------IVSD------GTTILGADDKAGLASMFEAI------RVLKEKN-IPHGTIEFIITVGEESGLV-GA--KALDRER---I--T-AKYGYALD----------SDG-K-----------V----G----EIVVAA------------------PTQA-----------------KVNAIIR--G--KTAHAGVAPEKG-V-SAITIAA-----KAIAKMPLGR---------------ID-----------------------------S--------------------------------E----------T-----T------------------A------------------------------------------------------NIGRF-------------------------------------EGGTQTNIV--------C--DH-VQIFA-EARS----LINEKMEAQVAKMKEAFE---------------------------------------------------------TTAK----------------------------E-M---GGHADVEVNV-MY-PGF--KFADGDH-VVEVAKRAAEK-I-G--RTP-SL--HQSGGGSD-ANVIA-G----H--GIPT--V-N-LAVGY-----E-EIHT-TNEKIPVEELAKTAELVVAI--------
41 HHSearch 60.8216% -42 - C1 -2POK ? A:[44-481] -----QHYFEVLRTLISKKSVFAQQ-------VGLKEVANYLGEIFKRV---GAE-VEIDESY-------------------T------APFVMAHFKSSR----PD-AKTLIFYNHYD-----TVPADGDQVW---TE--DPFTLS------V---------------------------------------------------RNGFMYGR------GV----DDDKGHITARLSAL----R-KYMQHHD-DLPVNISFIMEGAEESAST-DL--DKYLEKHADKLR-G-ADLLVWEQ----------G-T-K-----------NALEQL----EISGGN------------------KGIV-----------------TFDAKVK--SADVDIHSS-YGGVV-E-SAPWYLL-----QALQSLRAAD---------------GRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFL-----------K----------R-----F------------------F------------------------------------------------------FDPALNIEG------------IQSGYQGQGVKTIL------PAEASAKLEV-----R-LV--PG-LE-PH-DVLE----KI-----RKQLD-----K---------------------------------------------------------NGF------------------------------------DKVELYYTL-GE-MSYR--SDMSAP-AILNVIELAKK-FYPQGVSV-LP--TTAGTGPM-HTVFD-A----L--EVPM--V-A-FGLGNAN---S-RDHG-GDENVRIADYYTHIELVEELIRSYE---
40 HHSearch 60.6119% -32 - C1 -1CG2 CBPG_PSES6 A:[18-392] ----QPAVIKTLEKLVNIETGTGDA-------EGIAAAGNFLEAELKNL---GFTVTRSKSAGLV-----------------V------GDNIVGKIKGR------G-GKNLLLMSHMD-----TVYLK--GIL---AK--APFRV-----------------------------------------------------------EGDKAYGP------G----IADDKGGNAVILHTL----K-LLKEYGV-RDYGTITVLFNTDEEKGSF-GS--RDLIQEE---AK-L-ADYVLSFE----------P-T-S-----------AGD--E----KLSLGT------------------SGIA-----------------YVQVNIT--G--KASHAGAAPELG-V-NALVEAS-----DLVLRTMNID---------------DK-----------------------------A---------------------------------------------------------------------------------------------------------------------------KNLRFNWTI------------AKAGNVSNI----I------PASATLNADV-----R-YA--RN-ED-FD-AAMK----TL-----EERAQ-----Q---------------------------------------------------------KKL-----------------------------P-----EADVKVIVTR-GR-PAFNA-GEGGKK-LVDKAVAYYKE-AGG--TLG-VE--ERTGGGTD-AAYAA-L----S--GKPV--IES-LGLPG-----F-GYHSDKAEYVDISAIPRRLYMAARLIMDLGAG-