@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1795: (2016-03-28 )
MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30......----.----.40-.........-50--------------....-.-..--.60........-70.........80........90....-....100-.....--..110.......120.....-------..130..---.--.----.-..--------.---140.------.-.---------..-..150.....-------...160..-------...--------.--------.170...-----------------.--.------..180------.--------..-.-.....190...-.-...200--....-....-210.......220------------...-------------.....230.......240..---------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQK----V----GG--FPIALPIDD-PS--------------VAVQ-A-IS--LVDGLLLTGGQ-D-ITPQFYLEEPSQEIGAYFPPRDSYE-IALVRAA-LDAGK--PIFAICRGMQLVNVALGGSL-------YQD-ISQ---V--E----T-KA--------L---QHLQ------R-V---------DE-QLG-SHTIDI-------EPTSELAK-------HHP--------N--------KKLVNSL-----------------H--H------QFI--------K--------KL-A-PSFKVTARTAD-G-MIEAV---EGDN-LPSW-YLGVQWHPELMF-------------QTD-------------PESEQLFQALVDESKKTMVK---------------------------------
24 HHSearch 98.9698% -85 - C4 -3FIJ ? A:[3-244] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKPVIGITG------------------QQRYVDAIQK----V----GG--FPIALPIDD-PS--------------TAVQ-A-IS--LVDGLLLTGGQ-D-ITPQLYLEEPSQEIGAYFPPRDSYE-IALVRAA-LDAGK--PIFAICRGMQLVNVALGGTL-------YQD-ISQ---V--E----T-KA--------L---QHLQ------R-V---------DE-QLG-SHTIDI-------EPTSELAK-------HHP--------N--------KKLVNSL-----------------H--H------QFI--------K--------KL-A-PSFKVTARTAD-G-MIEAV---EGDN-LPSW-YLGVQWHPELMF-------------QTD-------------PESEQLFQALVDESKKTM-----------------------------------
22 PsiBlast_CBE 98.7296% -87 - C4 -3FIJ ? D:[3-243] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKPVIGITG------------------QQRYVDAIQK----V----GG--FPIALPIDD-PS--------------TAVQ-A-IS--LVDGLLLTGGQ-D-ITPQLYLEEPSQEIGAYFPPRDSYE-IALVRAA-LDAGK--PIFAICRGMQLVNVALGGTL-------YQD-ISQ---V--E----T-KA--------L---QHLQ------R-V---------DE-QLG-SHTIDI-------EPTSELAK-------HHP--------N--------KKLVNSL-----------------H--H------QFI--------K--------KL-A-PSFKVTARTAD-G-MIEAV---EGDN-LPSW-YLGVQWHPELMF-------------QTD-------------PESEQLFQALVDESKKT------------------------------------
1 PsiBlast_PDB 98.5396% -85 - C4 -3FIJ ? A:[3-244] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKPVIGITG------------------QQRYVDAIQK----V----GG--FPIALPIDD-PS--------------TAVQ-A-IS--LVDGLLLTGGQ-D-ITPQLYLEEPSQEIGAYFPPRDSYE-IALVRAA-LDAGK--PIFAICRGMQLVNVALGGTL-------YQD-ISQ---V--E----T-KA--------L---QHLQ------R-V---------DE-QLG-SHTIDI-------EPTSELAK-------HHP--------N--------KKLVNSL-----------------H--H------QFI--------K--------KL-A-PSFKVTARTAD-G-MIEAV---EGDN-LPSW-YLGVQWHPELMF-------------QTD-------------PESEQLFQALVDESKKTM-----------------------------------
21 PsiBlast_CBE 97.4196% -84 - C4 -3FIJ ? F:[3-243] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKPVIGITG------------------QQRYVDAIQK----V----GG--FPIALPIDD-PS--------------TAVQ-A-IS--LVDGLLLTGGQ-D-ITPQLYLEEPSQEIGAYFPPRDSYE-IALVRAA-LDAGK--PIFAICRGMQLVNVALGGTL-------YQD-ISQ---V--E----T-KA--------L---QHLQ------R-V---------DE-QLG-SHTIDI-------EPTSELAK-------HHP--------N--------KKLVNSL-----------------H--H------QFI--------K--------KL-A-PSFKVTARTAD-G-MIEAV---EGDN-LPSW-YLGVQWHPELMF-------------QTD-------------PESEQLFQALVDESKKT------------------------------------
56 Fugue 62.5518% -63 - C4 -1S1M PYRG_ECOLI A:[1-544] MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVG-KYIELPDAYKSVIEALKHGGLKNRVSV----N----IK--LIDSQDVET-RG--------------V--E-I-LK--GLDAILVPGGF-G-YRG------------------VEGM-ITTARFA-RENNI--PYLGICLGMQVALIDYARHVANMENANSTE-FVP---D--C----K-YP--------V---VALI------T-EWRDENGNVETM-RLG-AQQCQL-------VDDSLVRQ-------LYN--------A--------PTIVERH-----------------R--HRYEVNNMLL--------K--------QI-EDAGLRVAGRSGDDQ-LVEII---EVPN-HP-W-FVACQFHPEFTS-------------TPR--------------DGHPLFAGFVKAASEFQKRQA-------------------------------
5 PsiBlast_PDB 62.0224% -80 - C4 -1L9X GGH_HUMAN A:[30-243] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPIIGILMQKCRNKVMKNYGRY--YIAASYVKYLES----A----GARVVPVRLDLTE-KD--------------YEIL-F-KS---INGILFPGGSVD-LRRSDY-----AKVAKIF-----YN-LSI--QS-FDDGDYFPVWGTCLGFEELSLLISGEC-------LLT-ATD---T--V----D-VA--------M---P-LN------F-T---------GG-QLH-SRMFQN-------FPT-ELLL-------SLA--------V--------EPLTANF-----------------H--K------WSLSVKNFTMNE--------KL-K-KFFNVLTTNTD-G-KIEFISTMEGYK-YPVY---GVQWHPE-------------------------------------------------------------------------------------
45 HHSearch 58.8722% -76 - C4 -3TQI - GUAA_COXBU A:[20-241] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQLIARRVRE----I----GV--YCELMPCDI-D----------------EET-IRDF--NPHGIILSGGP-E-----------------------------APAFI-FEIGC--PVLGICYGMQTMAYQLGGKV-------N----------------------------------------------------------EFG-HAQLRV-------LNPAFLFD-------GIE--------DQVSPQGEPLLDVWMS-----------------H--G------DIV--------S--------EL-P-PGFEATACTDN-S-PLAAM---ADF---KRR-FFGLQFHPEVTH-------------T---------------PQGHRILAHFVIH----------------------------------------
26 HHSearch 58.6819% -55 - C4 -2A9V GUAAA_THEAC A:[25-204] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WTHREWRVLRE----L----GV--DTKIVPNDI-D-----------------SS-E-LD--GLDGLVLSGGA-PNIDEE------LDK-----------L-GSVGKYI-DDHNY--PILGICVGAQFIALHFGASV-------VKA-KHP----------------------------------------------------EFG-KTKVSV-------MHSENIFG-------GLP--------S--------EITVWEN-----------------H--N------DEI--------I--------NL-P-DDFTLAASSAT-C-QVQGF---YHK---TRP-IYATQFHPEVEH-------------T---------------QYGRDIFRNFIGICASYRE----------------------------------
31 HHSearch 58.3818% -66 - C4 -2V4U - PYRG2_HUMAN A:[298-552] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ICSIALVGKYTKLR----------DCYASVFKALEH----SALAINH--KLNLMYIDS-IDLEKITETEDPVKFHEAWQ-K-LC--KADGILVPGGF-G-IRGT------------------LGK-LQAISWA-RTKKI--PFLGV-LGMQLAVIEFARNC-------LNL-KDA---D--STEFRP-NAPVPLVIDMP---EHNPGNL---G-G---------TM-RLGIRRTVFK-------TENSILRK-------LYG--------D--------VPFIEER-----------------HRHR------FEV--------NPNLIK---QFEQ-NDLSFVGQDVD-GDRMEII---ELA---NHPYFVGVQFHPEFSS-------------RP--------------MKPSPPYLGLLLAATGNLN----------------------------------
33 HHSearch 58.2121% -64 - C4 -2YWB - GUAA_THET8 A:[12-215] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRLIARRLRE----L----RA--FSLILPGDA-P----------------LEE-VLKH--RPQALILSGGP-R-S-V--FDP-DA---------------PRPDPRL-FSSGL--PLLGICYGMQLLAQELGGRV-------ERA--------------------------------------------------------EYG-KALLTR-------H-EGPLFR-------GLE--------G--------EVQVWMS-----------------H--Q------DAV--------T--------AP-P-PGWRVVAETEE-N-PVAAI---ASP---DGR-AYGVQFHPEVAH-------------T---------------PKGMQILENFLELAGV-------------------------------------
25 HHSearch 58.2120% -37 * C4 *1L9X GGH_HUMAN A:[30-282] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPIIGILMQKCRNKVMK--NYGRYYIAASYVKYLES----A----GA--RVVPVRLDL-TEK-------------DYEI-L-FK--SINGILFPGGSVD-LRRSDYAKVA-----------KIFY-NLSIQSFDDGDYF--PVWGTCLGFEELSLLISGEC-------LLT-ATD---T--V----D-V-------------AM--------P-L---------NFTGGQ-LHSRMFQN-----FPTELLLS-------LA---------V--------EPLTANF-----------------H--K------WSL--------SVKNFTMNEKL-K-KFFNVLTTNTD-G-KIEFI---STMEGYKYP-VYGVQWHPEKAP-------------YEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHH---------------------------------
17 PsiBlast_PDB 57.9821% -68 - C4 -2NV0 - PDXT_BACSU A:[14-192] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------REHIHAIEA----C----GA----AGLVVKR-P------------------E-Q-LN--EVDGLILPGGE-S-TTMRRLI--------------DTYQFMEPLREF-AAQGK--PMFGTCAGLIILAKEIA-----------PH-LGL---L---------NV--------V---VERN------S-F---------GR-QVD-SFEADLTIKGLD-EPFTGVFI-------RAP--------H--------------------------------------------I--------L--------EA-G-ENVEVLSEHNG-R-IVAAK---QGQ-------FLGCSFHPELT---------------ED-------------HRVTQLFVEMVEEYKQ-------------------------------------
44 HHSearch 57.0922% -82 - C4 -2VXO - GUAA_HUMAN A:[42-222] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKVIDRRVRE----L----FV--QSEIFPLET-P----------------AFAIK-EQ--GFRAIIISGGP-------------APW---------------FDPAI-FTIGK--PVLGICYGMQMMNKVFGGTV-------HK-------------------------------------------------------------VFNISV-------DNTCSLFR-------GLQ--------K--------EEVVLLT-----------------H--G------DSV--------D--------KV-A-DGFKVVARSGN---IVAGI---ANE---SKK-LYGAQFHPEVGL-------------T---------------ENGKVILKNFLY-----------------------------------------
34 HHSearch 55.8219% -62 - C4 -3UOW - ? A:[20-256] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FHLIVKRLNN----I----KI--FSETKDYGV-E----------------LKD-IKDM--NIKGVILSGGP-Y-S-V--TE-AGSPH----------LK-KEVFEYF-LEKKI--PIFGICYGMQEIAVQMNGEV-------KKS-KTS---E--Y----G-CT--------D---VNIL------RNDNINNITYCRNF-----SSAMDLYSNYKLMN--CCLFE-------NIKS-------D--------ITTVWMN-----------------H--N------DEV--------T--------KI-P-ENFYLVSSSEN-C-LICSI---YNK---EYN-IYGVQYHPEVYE-------------S---------------LDGELMFYNFAYN----------------------------------------
30 HHSearch 55.5421% -79 - C4 -2VPI - GUAA_HUMAN A:[39-214] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVIDRRVRE----L----FV--QSEIFPLET-P----------------AFAIK-EQ--GFRAIIISG---------------APW---------------FDPAI-FTIGK--PVLGICYGMQMMNKVFGGTV-------HKK-SVR----------------------------------------------------EDG-VFNISV-------DNTCSLFR-------GLQ--------K--------EEVVLLT-----------------H--G------DSV--------D--------KV-A-DGFKVVARS-G-N-IVAGI---ANE---SKK-LYGAQFHPEVGL-------------T---------------ENGKVILKNFLYDIAGCS-----------------------------------
39 HHSearch 55.2121% -59 - C4 -1GPM GUAA_ECOLI A:[20-224] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQLVARRVRE----L----GV--YCELWAWDV-T----------------EAQ-IRDF--NPSGIILSGGP-E-ST---TEE-NS---------------PRAPQYV-FEAGV--PVFGVCYGMQTMAMQLGGHV-------EAS-NE---------------------------------------------------R-EFG-YAQVEV-------VNDSALVR-------GIEDALTADGKP--------LLDVWMS-----------------H--G------DKV--------T--------AI-P-SDFITVASTES-C-PFAIM---ANE---EKR-FYGVQFHPEVTH-------------T---------------RQGMRMLERFVRDIC--------------------------------------
38 HHSearch 54.8916% -62 - C4 -3NVA - PYRG_SULSO A:[309-534] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YISIKEAIYHASAYI----GV--RPKLIWIES-TDLESDTK--------NLNE-I-LG--NVNGIIVLPGF-G-S-RG--A---------------EGK-IKAIKYA-REHNI--PFLGICFGFQLSIVEFARDV-------LGL-SEANSTE--I----NPNTKDP-----VITLLDEQKNVTQLG-G---------TM-RLG-AQKIIL-------KEGTIAYQ-------LYGK-------K--------VVYERHR-----------------H--R------YEV--------NPKYVD---ILED-AGLVVSGISEN-G-LVEII---ELPS--NKF-FVATQAHPEFKS-------------RP--------------TNPSPIYLGFIRAVAS-------------------------------------
3 PsiBlast_PDB 53.9426% -80 - C4 -2VXO - GUAA_HUMAN A:[59-207] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPLET-PA--------------FAIK-E-QG--F-RAIIISGGP-----------------APWFDP-----------AI-FTIGK--PVLGICYGMQMMNKVFGGTV------------------------------------------HK--------------------------VFNISV-------DNTCSLFR-------GLQ--------K--------EEVVLLT-----------------H--G------DSV--------D--------KV-A-DGFKVVARS---G-NIVAG---IANE-SKKL-Y-GAQFHPEV------------------------------------------------------------------------------------
7 PsiBlast_PDB 53.7618% -52 - C4 -3UOW - ? A:[13-247] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNFGSQYFHLIVKR----L----NN--IKIFSETKD-YG--------------VELK-D-IKDMNIKGVILSGGP-Y-SVTEAGSPHLKKEVFEYF----------------LEKKI--PIFGICYGMQEIAVQMNGEV-------KKSKTSE---Y--G----C-TD--------V---NILR------N-D---------NI-NNI-TYCRNF----------SSAMD-------LYS--------N--------YKLMN--CCLFENIKSDITTVWMNH--N------DEV--------T--------KI-P-ENFYLVSSSEN-C-LICSI---YNKE-YNIY---GVQYHPEVYE-------------SLD-------------GE---------------------------------------------------
54 Fugue 53.1419% -46 - C4 -1L9X GGH_HUMAN A:[28-315] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKKPIIGILMQKCRNKVMKNYGR--YYIAASYVKYLES----A----GA--RVVPVRLDLTEK--------------DYEI-L-FK--SINGILFPGGS-V-DLRRSDYAKVAKIFYNLSIQSFDDG-DYF------------PVWGTCLGFEELSLLISGEC-------LLT-ATD---TVDV----A-MP--------L---NFTG------G-Q---------LH-SRM-FQNFPT-------ELLLSLAVEPLTANFHKW--------S--------LSVKNFT-----------------M--N------EKL--------K--------KF-F-NVLTTNTDGKI-E-FISTM---EGYK-YP---VYGVQWHPEKAPYEWKNLDGISHAPNAV-------------KTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFSPIYTGNISSFQQCYIFD