@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1802: (2016-03-28 )
LFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFTQLEAQLTKKNFLDEQVKDTLEQLKNID

Atome Classification :

(20 SA) -------------------------------------------........-.10........20........30.----.......40........--------50.-.......60...----.....70......---..80....---..-..-90........100.-......110----------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------LFEKTNRM-NLLFDFYQELLTTKQKAYVSFYYL----DDYSLGEIAEEFEVSRQ--------AIY-DNIKRTEESLEK----YEEKLGMLKKYQQ---REKLFTQL---EA-QL-TKKNFLDEQVKDTL-EQLKNID------------------
17 Fugue 95.4155% -75 - C2 -1S7O - Y1201_STRP1 (first) A:[7-112] ---------------------------------------------EKTNRM-NALFEFYAALLTDKQMNYIELYYA----DDYSLAEIADEFGVSRQ--------AVY-DNIKRTEKILET----YEMKLHMYSDYVV---RSEIFDDM---IA-HY-PH----DEYLQEKI-SILTSIDNR----------------
27 HHSearch 91.0255% -76 - C2 -1S7O - Y1201_STRP1 (first) A:[8-110] ----------------------------------------------KTNRM-NALFEFYAALLTDKQMNYIELYYA----DDYSLAEIADEFGVSRQ--------AVY-DNIKRTEKILET----YEMKLHMYSDYVV---RSEIFDDM---IA-----H-YPHDEYLQEKI-SILTSID------------------
1 PsiBlast_PDB 90.8755% -78 - C2 -1S7O - Y1201_STRP1 (first) A:[7-104] ---------------------------------------------EKTNRM-NALFEFYAALLTDKQMNYIELYYA----DDYSLAEIADEFGVSRQ--------AVY-DNIKRTEKILET----YEMKLHMYSDYVV---RSEIFDDM---IA-HY-PHDEYLQEKIS-----------------------------
35 HHSearch 82.0864%-103 - C2 -1XSV - Y1236_STAAM A:[13-73] ----------------------------------------------------NYLFDFYQSLLTNKQRNYLELFYL----EDYSLSEIADTFNVSRQ--------AVY-DNIRRTGDLVED----YEKKL--------------------------------------------------------------------
2 PsiBlast_PDB 62.3546% 36 - C2 -1XSV - Y1236_STAAM A:[8-110] ----------------------------------------------KTLRM-NYLFDFYQSLLTNKQRNYLELFYL----EDYSLSEIADTFNVSRQ--------AVY-DNIRRTGDLVED----YEKKLELYQKFEQ---RREIYDEM---KQ-HL-SNP----EQIQRYI-QQLEDLE------------------
30 HHSearch 54.8221% -67 - C2 -3MZY - ? A:[148-199] ------------------------------------------------------------NNFSKFEKEVLT-YLI----RGYSYREIATILSKNLK--------SID-NTIQRIRKKSEE----WIKEE--------------------------------------------------------------------
18 Fugue 53.6621% -45 - C2 -1V74 - IMMD_ECOLX B:[1-87] ------------------------------------------------MNK-MAMIDLAKLFLASK----------------ITAIEFSERICVERR--------RLY--GVKDLSPNILN----CGEELFMAAERFE---PDADRANY---E-----IDDNGLKVEVRSIL-EKFKL--------------------
28 HHSearch 53.5318% -53 - C2 -1OR7 - RPOE_ECOLI A:[128-187] ----------------------------------------------------RQIVFRTIESLPEDLRMAITLREL----DGLSYEEIAAIMDCPVG--------TVR-SRIFRAREAIDN----KVQP---------------------------------------------------------------------
23 Fugue 53.0328% -34 - C2 -2R5S ? A:[6-176] DEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQ-----FELAQELLATIPLEY----------QDNSYKSLIAKLELHQQ--------AAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELL---WN-ILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYSILY
34 HHSearch 52.7513% -70 - C2 -1RP3 - ? A:[174-233] --------------------------------------------------L-TEKVKEAVSKLPEREKLVIQLIFY----EELPAKEVAKILETSVS--------RVS-QLKAKALERLRE----MLS----------------------------------------------------------------------
36 HHSearch 50.8714% -62 - C2 -3HUG SIGL_MYCTU A:[25-87] ------------------------------------------------ALD-RLLIADALAQLSAEHRAVIQRSYY----RGWSTAQIATDLGIAEG--------TVK-SRLHYAVRALRL----TLQE---------------------------------------------------------------------
32 HHSearch 47.6918% -57 - C2 -2O8X RPSC_MYCTU A:[5-61] --------------------------------------------------D-LVEVTTMIADLTTDQREALLLTQL----LGLSYADAAAVCGCPVG--------TIR-SRVARARDALLA-----------------------------------------------------------------------------
48 HHSearch 47.1916% -36 - C2 -3KLO - ? A:[156-216] ----------------------------------------------------------MYAKLTKREQQIIKL-LG----SGASNIEIADKLFVSEN--------TVK-THLHNVFKKINA----KN-RLQALIWAKN------------------------------------------------------------
21 Fugue 46.6413% -77 - C2 -2B8I - ? A:[1-77] ---------------------------------------------IRPYMK-ALIYETLVNLANQD----------------------PEQHATIRQ--------NLY-EQLDLP----------FDKQLALYAG---------ALGPA---SSGKL-ENHEAISNAVDSVV-QLLEI--------------------
26 Fugue 46.5012% -37 - C2 -1K40 - FAK1_MOUSE A:[921-1046] ----------------------------------------NDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKE----VGLALRTLLATVDETIPALPASTHREIE-MAQKLLNSDLGE----LISKMKLAQQYVM---TSLQQEYK---KQ-ML-TAAHALAVDAKNLL-DVIDQARLKML--------------
11 PsiBlast_PDB 46.1924% -43 - C1 -4NFY - ? A:[16-73] ---------------------------------------------------------------------------------------------------------------VKGIREILEK----AGHEVVMIEKYKK---KEDVIERIKDADG-VI-VRSDKIDEEIIKAG-EKVKII-------------------
14 PsiBlast_PDB 45.9019% -15 - C2 -3IHV ? A:[41-133] --------------------------------------------------L-SILFNLGTDISQVEGSGNENFRII----PTNSFPTTQSEVQQTWA--------ALY-TGIYRANDFLER----ISNKIGSYTTTDK---KLATLYIA---EA-RA-LRGMFYFELVR-----------------------------
42 HHSearch 45.5216% -38 * C2 *1KU3 - SIGA_THEAQ A:[368-428] ------------------------------------------------------ELEKALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRE--------RIR-QIENKALRKLKY----HES----------------------------------------------------------------------
12 PsiBlast_PDB 44.8524% -38 - C1 -4NJM ? A:[18-75] ---------------------------------------------------------------------------------------------------------------VKGIREILEK----AGHEVVMIEKYKK---KEDVIERIKDADG-VI-VRSDKIDEEIIKAG-EKVKII-------------------
3 PsiBlast_PDB 44.3224% 9 - C2 -3F6O ? A:[8-97] ------------------------------------------------------LNGIFQALADPTRRAVLGRLSR----GPATVSELAKPFDMALP--------SFM-KHIHFLEDSGWI----RTHKQGRVRTCAI---EKEPFTAV---EA-WL-AEQQELWESRT-----------------------------