@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1849: (2016-03-29 )
MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEPFAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQTFTEEKIQFAYGDAPVAFAAGV

Atome Classification :

(29 SA) ----.........10-.----.----..-.....20........30........40........50......--------.--------.-60-----.---.-----..-.------------------.--.--..-------70--.-----......-..80...-.-....90-.........100.......110.--......120-....-..-.----.130.......140.......150----.........160.......170.......-180-.--..-..-...190.......200.-...-.-.-.210.......220.......230.......240---------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MEIQGLTIAY--K----Q----KV-AIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQV--------T--------L-A------D---K-----PL-T------------------Y--W--RK-------K---I-----AYVPQR-SEVDLTF-P-ITVFD--MVLLGTYPALGLIKRPGKKEKQL--ALDALEQV--EMTG-FM-K----RQIGELSGGQLQRVFIARALAQ------HAEIFFLDEPFAGIDMTSEALIMRLLKKL-R-D-N--GK-TI-VVVHHDFHKVAAYFDDI-ILL-N-K-KLVAHGPVEQTFTEEKIQFAYGDAPVAFAAGV-----------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 89.1433%-131 - C1 -4G1U HMUV_YERPE C:[12-245] ----LEASHLHYHV--Q----Q----QA-LINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGEC--------H--------L-L------G---Q-----NL-N------------------S--W--QP-------K---ALARTRAVMRQY-SE--LAF-P-FSVSE--VIQMGRAP------YGGSQDRQA--LQQVMAQT--DCLA-LA-Q----RDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTR-Q-E--PL-AV-CCVLHDLNLAALYADRI-MLL-A-QGKLVACGTPEEVLNAETLTQWY----------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 87.4133%-131 - C1 -4G1U HMUV_YERPE D:[12-245] ----LEASHLHYHV--Q----Q----QA-LINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGEC--------H--------L-L------G---Q-----NL-N------------------S--W--QP-------K---ALARTRAVMRQY-SE--LAF-P-FSVSE--VIQMGRAP------YGGSQDRQA--LQQVMAQT--DCLA-LA-Q----RDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTR-Q-E--PL-AV-CCVLHDLNLAALYADRI-MLL-A-QGKLVACGTPEEVLNAETLTQWY----------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 86.2031%-117 - C1 -4QC2 ? B:[7-234] -------KNLAKAY--K----G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI--------I--------I-D------D---DDISLLPLHA------------------R--A--RR-------G---I-----GYLPQ---EASIFR-R-LSVYDNLMAVLQIRDDLSAEQREDR-------ANELMEEF--HIEH-LR-D----SMGQSLSGGERRRVEIARALAA------NPKFILLDEPFAGVDPISVIDIKRIIEHL-R-D-S--GL-GV-LITDHNVRETLAVCERA-YIV-S-QGHLIAHGTPTEILQDEHVKRVY----------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 85.5831%-118 - C1 -4QC2 ? A:[7-234] -------KNLAKAY--K----G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI--------I--------I-D------D---DDISLLPLHA------------------R--A--RR-------G---I-----GYLPQ---EASIFR-R-LSVYDNLMAVLQIRDDLSAEQREDR-------ANELMEEF--HIEH-LR-D----SMGQSLSGGERRRVEIARALAA------NPKFILLDEPFAGVDPISVIDIKRIIEHL-R-D-S--GL-GV-LITDHNVRETLAVCERA-YIV-S-QGHLIAHGTPTEILQDEHVKRVY----------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 84.5431%-125 - C1 -4P32 LPTB_ECOLI A:[6-233] -------KNLAKAY--K----G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI--------I--------I-D------D---DDISLLPLHA------------------R--A--RR-------G---I-----GYLPQ---EASIFR-R-LSVYDNLMAVLQIRDDLSAEQREDR-------ANELMEEF--HIEH-LR-D----SMGQSLSGGERRRVEIARALAA------NPKFILLDEPFAGVDPISVIDIKRIIEHL-R-D-S--GL-GV-LITDHNVRETLAVCERA-YIV-S-QGHLIAHGTPTEILQDEHVKRVY----------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 84.2430%-124 - C1 -4P33 LPTB_ECOLI A:[6-233] -------KNLAKAY--K----G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI--------I--------I-D------D---DDISLLPLHA------------------R--A--RR-------G---I-----GYLPQ---EASIFR-R-LSVYDNLMAVLQIRDDLSAEQREDR-------ANELMEEF--HIEH-LR-D----SMGQSLSGGERRRVEIARALAA------NPKFILLDQPFAGVDPISVIDIKRIIEHL-R-D-S--GL-GV-LITDHNVRETLAVCERA-YIV-S-QGHLIAHGTPTEILQDEHVKRVY----------------------------------------------------------------------------------------------------------------------
42 Fugue 84.2131%-110 - C1 -1Z47 ? A:[11-355] GSMTIEFVGVEKIY--P----G----GARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDV--------W--------I-G------G---K-----RV-T------------------D--L--PP-------QKRNV-----GLVFQN---YALFQ-H-MTVYD--NVSFGLREK----RVPKDEMDAR--VRELLRFM--RLES-YA-N----RFPHELSGGQQQRVALARALAP------RPQVLLFDEPFAAIDTQIRRELRTFVRQV-H-D-EM-GV-TS-VFVTHDQEEALEVADRV-LVL-H-E------GNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR
22 PsiBlast_CBE 83.3231%-127 - C1 -4P32 LPTB_ECOLI B:[6-230] -------KNLAKAY--K----G----RR-VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI--------I--------I-D------D---DDISLLPLHA------------------R--A--RR-------G---I-----GYLPQ---EASIFR-R-LSVYDNLMAVLQIRDDLSAEQREDR-------ANELMEEF--HIEH-LR-D----SMGQSLSGGERRRVEIARALAA------NPKFILLDEPFAGVDPISVIDIKRIIEHL-R-D-S--GL-GV-LITDHNVRETLAVCERA-YIV-S-QGHLIAHGTPTEILQDEHVK-------------------------------------------------------------------------------------------------------------------------
37 Fugue 82.6628%-124 - C1 -3TUZ METN_ECOLI H:[23-362] --HMIKLSNITKVF--HQGTRT----IQ-ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSV--------LVDGQELTTL-S------E---S-----EL-T------------------K--A--RR-------Q---I-----GMIFQH-F--NLLS-S-RTVFG--NVAL----PLELDNTPKDEVKRR--VTELLSLV--GLGD-KH-D----SYPSNLSGGQKQRVAIARALAS------NPKVLLCDQATSALDPATTRSILELLKDI-N-R-RL-GL-TI-LLITHEMDVVKRICDCV-AVI-S-NGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV-----------------
51 HHSearch 82.0129%-119 * C1 *3TUI METN_ECOLI C:[25-256] ----IKLSNITKVF--H----QGTRTIQ-ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSV--------L--------V-D------G---Q-----EL-TTLSESELT----------K--A--RR-------Q---I-----GMIFQH-FNL--LS-S-RTVFG--NVALPLELDNT----PKDEVKRR--VTELLSLV--GLGD-KH-D----SYPSNLSGGQKQRVAIARALAS------NPKVLLCDQATSALDPATTRSILELLKDI-N-RRL--GL-TI-LLITHEMDVVKRICDCV-AVISN-G-ELIEQDTVSEVFSHPK---------------------------------------------------------------------------------------------------------------------------
63 HHSearch 81.9929%-134 - C1 -2NQ2 - Y1470_HAEIN C:[5-226] ----LSVENLGFYY--QA---E----NF-LFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKI--------E--------V-Y---------------------------------------------Q-------S---I-----GFVPQF-FS--SPF-A-YSVLD--IVLMGRSTHINTFAKPKSHDYQV--AMQALDYL--NLTH-LA-K----REFTSLSGGQRQLILIARAIAS------ECKLILLDEPTSALDLANQDIVLSLLIDL-A-QSQ--NM-TV-VFTTHQPNQVVAIANKT-LLL-N-K-QNFKFGETRNILTSENLTALFH---------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 79.5328%-141 - C1 -2NQ2 - Y1470_HAEIN C:[5-221] ----LSVENLGFYY--QA---E----NF-LFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKI--------E--------V----------------------------------------------YQ-------S---I-----GFVPQF---FSSPF-A-YSVLD--IVLMGRSTHINTFAKPKSHDYQV--AMQALDYL--NLTH-LA-K----REFTSLSGGQRQLILIARAIAS------ECKLILLDEPTSALDLANQDIVLSLLIDLAQ-S-Q--NM-TV-VFTTHQPNQVVAIANKT-LLL-N-K-QNFKFGETRNILTSENL--------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 79.4827%-132 - C1 -3GFO ECFA3_CLOP1 A:[8-237] ----LKVEELNYNY--S----D----GTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRI--------L--------F-D------N---K-----PI-D------------------Y--S--RKGIMKLRES---I-----GIVFQD-PDNQL-F-S-ASVYQ--DVSFGAVN----MKLPEDEIRKR--VDNALKRT--GIEH-LK-D----KPTHCLSFGQKKRVAIAGVLVM------EPKVLILDEPTAGLDPMGVSEIMKLLVEMQK-E-L--GI-TI-IIATHDIDIVPLYCDNV-FVM-K-EGRVILQGNPKEVFAEKEV--------------------------------------------------------------------------------------------------------------------------
56 HHSearch 77.2827%-126 - C1 -3GFO ECFA3_CLOP1 A:[8-239] ----LKVEELNYNY--S----DG---TH-ALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRI--------L--------F-D------N---K-----PI-DYSRKGIM-----------K--L--RE-------S---I-----GIVFQD-PDN-QLF-S-ASVYQ--DVSFGAVNMK----LPEDEIRKR--VDNALKRT--GIEH-LK-D----KPTHCLSFGQKKRVAIAGVLVM------EPKVLILDEPTAGLDPMGVSEIMKLLVEM-Q-KEL--GI-TI-IIATHDIDIVPLYCDNV-FVMKE-G-RVILQGNPKEVFAEKEVIR------------------------------------------------------------------------------------------------------------------------
61 HHSearch 76.6029%-121 - C1 -1B0U HISP_SALTY A:[7-246] ----LHVIDLHKRY--G----G----HE-VLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAI--------I--------V-N------G---Q-----NI-NLVRDKDGQLKVADKNQLRL--L--RT-------R---L-----TMVFQH-FN---LWSH-MTVLE--NVMEAPIQVLGL---SKHDARER--ALKYLAKV--GIDE-RAQG----KYPVHLSGGQQQRVSIARALAM------EPDVLLFDEPTSALDPELVGEVLRIMQQL-A-E-E--GK-TM-VVVTHEMGFARHVSSHV-IFLHQ-G-KIEEEGDPEQVFGNPQS--------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 76.4335%-115 - C1 -3TIF Y796_METJA A:[20-230] -----------------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTND--------L-D------D---D-----EL-T------------------K--I--RRD------K---I-----GFVFQQFNLIPLLT-A-LENVE--LPLIFKYRG----AMSGEERRKR--ALECLKMA--ELEERFA-N----HKPNQLSGGQQQRVAIARALAN------NPPIILADQPTWALDSKTGEKIMQLLKKL-NEE-D--GK-TV-VVVTHDIN-VARFGERI-IYL--------KDGEVER---EEKLR-------------------------------------------------------------------------------------------------------------------------
62 HHSearch 75.8529%-132 - C1 -2IHY ? A:[22-256] ----IQLDQIGRMK--Q----G----KT-ILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTV--------N--------L-F------G---K-----MP--GYSAE-------------T--V--RQ-------H---I-----GFVSHS-LLEKFQE-G-ERVID--VVISGA---------IDDEIRNE--AHQLLKLV--GMSA-KA-Q----QYIGYLSTGEKQRVMIARALMG------QPQVLILDEPAAGLDFIARESLLSILDSL-S-D-SYPTL-AM-IYVTHFIEEITANFSKI-LLLKD-G-QSIQQGAVEDILTSENM--------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 75.7831%-123 - C1 -3DHW - METN_ECOLI C:[20-237] -----------------------------ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTT--------L-S------E---S-----EL-T------------------K--A--RR-------Q---I-----GMIFQH---FNLLS-S-RTVFG--NVAL----PLELDNTPKDEVKRR--VTELLSLV--GLGD-KH-D----SYPSNLSGGQKQRVAIARALAS------NPKVLLCDEATSALDPATTRSILELLKDINR-R-L--GL-TI-LLITHEMDVVKRICDCVAVIS-N-G-ELIEQDTVSEVFSHPKTPLA-----------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 75.4231%-114 - C1 -4HUQ - ECFA1_LACBA B:[6-228] ----ISVDHLTYQYDEN----Q----AP-ALTDVSFTVHAGEWLAIVGHNGSGKSTLAKSLDGLLPFTQGSV--------T--------V-G------GITLT-----PE-T------------------V--WQVRE-------Q---I-----GMIFQN-PDNQF-V-G-ATVED--DV------AFGLENRQISRDEMVPRVQAALAQV--GMTS-FA-Q----REPSSLSGGQKQRVALAGIVAI------APKILILDEATSMLDPQGRIEMLAIVRQL-R-Q-Q--QNLTV-ISITHDIDEAASADRVL-VID-D-G-RLVDEAVPSQIF-------------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 74.9935%-121 - C1 -3TIF Y796_METJA B:[20-230] -----------------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTND--------L-D------D---D-----EL-T------------------K--I--RRD------K---I-----GFVFQQFNLIPLLT-A-LENVE--LPLIFKYRG----AMSGEERRKR--ALECLKMA--ELEERFA-N----HKPNQLSGGQQQRVAIARALAN------NPPIILADQPTWALDSKTGEKIMQLLKKL-NEE-D--GK-TV-VVVTHDIN-VARFGERI-IYL--------KDGEVER---EEKLR-------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 74.4135%-113 - C1 -1L2T Y796_METJA A:[20-230] -----------------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTND--------L-D------D---D-----EL-T------------------K--I--RRD------K---I-----GFVFQQFNLIPLLT-A-LENVE--LPLIFKYRG----AMSGEERRKR--ALECLKMA--ELEERFA-N----HKPNQLSGGQQQRVAIARALAN------NPPIILADQPTGALDSKTGEKIMQLLKKL-NEE-D--GK-TV-VVVTHDIN-VARFGERI-IYL--------KDGEVER---EEKLR-------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 74.1835%-119 - C1 -1L2T Y796_METJA B:[20-230] -----------------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTND--------L-D------D---D-----EL-T------------------K--I--RRD------K---I-----GFVFQQFNLIPLLT-A-LENVE--LPLIFKYRG----AMSGEERRKR--ALECLKMA--ELEERFA-N----HKPNQLSGGQQQRVAIARALAN------NPPIILADQPTGALDSKTGEKIMQLLKKL-NEE-D--GK-TV-VVVTHDIN-VARFGERI-IYL--------KDGEVER---EEKLR-------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 73.2735%-117 - C1 -1F3O Y796_METJA A:[20-230] -----------------------------ALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTND--------L-D------D---D-----EL-T------------------K--I--RRD------K---I-----GFVFQQFNLIPLLT-A-LENVE--LPLIFKYRGA----MSGEERRKR--ALECLKMA--ELEERFA-N----HKPNQLSGGQQQRVAIARALAN------NPPIILADEPTGALDSKTGEKIMQLLKKL-NEE-D--GK-TV-VVVTHDIN-VARFGERI-IYL--------KDGEVER---EEKLR-------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 72.1330%-130 - C1 -4U00 ? A:[20-230] ------------------------------LKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEV--------V--------V-DGLSVKDD---R-----AL-R------------------E--I--RR-------E---V-----GMVFQQ-FNL---F-PHMTVLE--NV---TLAPMRVRRWPREKAEKK--ALELLERV--GILD-QA-R----KYPAQLSGGQQQRVAIARALAM------EPKIMLFDEPTSALDPEMVGEVLDVMRDL-A-Q-G--GM-TM-VVVTHEMGFAREVADRV-VFM-DGG-QIVEEGRPEEIFTRPK---------------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 68.2932%-126 - C1 -4MKI ECFA2_CALS4 A:[25-238] ---------------------------V-ALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGI---D--------I-T------D---K-----KV-S------------------LKDI--RK-------Q---V-----GLVFQY-PEYQL-F-E-ETVFK--DIAFGP-SNLGL------SEEEV--KERVYEAM--EIVG-IS-KELADKSPFELSGGQKRRVAIAGILAM------RPKILILDEPTAGLDPKGKQEILNKIKEI-H-D-K--YK-MITILVSHNMEDIARIADKI-IVM-N-RGKIELIGTPREVFRE-----------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 67.5732%-123 - C1 -4MKI ECFA2_CALS4 B:[25-238] ---------------------------V-ALKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGI---D--------I-T------D---K-----KV-S------------------LKDI--RK-------Q---V-----GLVFQY-PEYQL-F-E-ETVFK--DIAFGP-SNLGL------SEEEV--KERVYEAM--EIVG-IS-KELADKSPFELSGGQKRRVAIAGILAM------RPKILILDEPTAGLDPKGKQEILNKIKEI-H-D-K--YK-MITILVSHNMEDIARIADKI-IVM-N-RGKIELIGTPREVFRE-----------------------------------------------------------------------------------------------------------------------------
30 PsiBlast_CBE 66.4131%-122 - C1 -4HLU ECFA2_THEMA A:[21-215] ---------------------E----KK-ALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDV--------L--------YDG------E---R-----KK-G------------------YE-I--RR-------N---I-----GIAFQY-PE-DQFF-A-ERVFD--EVAFAVKNFY-----PDRDPVPL--VKKAMEFVGLDFDS-FK-D----RVPFFLSGGEKRRVAIASVIVH------EPDILILDEPLVGLDREGKTDLLRIVEKW-K-T-L--GK-TV-ILISHDIETVINHVDRV-VVL-E-K--------------------------------------------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 65.9431%-123 - C1 -4HLU ECFA2_THEMA B:[21-215] ---------------------E----KK-ALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDV--------L--------YDG------E---R-----KK-G------------------YE-I--RR-------N---I-----GIAFQY-PE-DQFF-A-ERVFD--EVAFAVKNFY-----PDRDPVPL--VKKAMEFVGLDFDS-FK-D----RVPFFLSGGEKRRVAIASVIVH------EPDILILDEPLVGLDREGKTDLLRIVEKW-K-T-L--GK-TV-ILISHDIETVINHVDRV-VVL-E-K--------------------------------------------------------------------------------------------------------------------------------------------
28 PsiBlast_CBE 63.4731%-128 - C1 -4ZIR ECFA2_THEMA A:[20-214] ---------------------E----KK-ALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDV--------L--------YDG------E----------K-G------------------YE-I--RR-------N---I-----GIAFQY-PE-DQFF-A-ERVFD--EVAFAVKNFY-----PDRDPVPL--VKKAMEFVGLDFDS-FK-D----RVPFFLSGGEKRRVAIASVIVH------EPDILILDEPLVGLDREGKTDLLRIVEKW-K-T-L--GK-TV-ILISHDIETVINHVDRV-VVL-E-K--------------------------------------------------------------------------------------------------------------------------------------------