@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1898: (2016-03-29 )
MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKKILHVNLGMEKETPIWEVAYLDKNDKLNYFDINFETGEWYREIENL

Atome Classification :

(20 SA) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10-------.-.......--20........30-------........40...--..-----...50........60...-----------.....70........80........90-----------..-......-.-------------100.....-----------..110..-----------.----....-120.....------.------.130..-.....-----140-----------..-..---..-------..------150....--...-----160-------......--...--170-..--...-....180...-------.-----...190..-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYLCENENAYR-------R-RNSGNLE--IEMSEITLRNRK-------PKRKIGKWIAIIL--GI-----IIVLVVAAFLYFRYAEKP-----------VTNAETEALDRISGQVDLKTTDQFYL------------YN-GPKEVY-Y-------------VLTGKNSK-----------NKNIIVW-----------V----PKKK-SDKVYVKF------A------SDGITE-QQARD-----KV------------TK-EK---KP-------KK------ILHVNLG--MEK-----E---------TPIWEV--AYL--D---KN--DKL-NYFDINFETG-------E-----WYREIENL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 Fugue 93.6432% -57 - C7 -2GU3 YPMB_BACSU A:[9-136] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEEGHEAAAAEAKKETDLAHVDQVET------------FV-G-KEKY-Y-------------VVKGTDKK-----------GTALYVW-----------V----PADK-KAKILSKE------A------KEGISE-DKAAK-----II------------KD-EG---LV-------SK------QKEVHLA--REG-----N---------VLLWEV--TYL--D---KE--GQY-SLSYVDFTTG-------K-----ILKNITP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 92.0836% -55 - C7 -2GU3 YPMB_BACSU A:[25-134] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLAHVDQVET------------FV-G-KEKY-Y-------------VVKGTDKK-----------GTALYVW-----------V----PADK-KAKILSKE------A------KEGISE-DKAAK-----II------------KD-EG---LV-------SK------QKEVHLA--REG-----N---------VLLWEV--TYL--D---KE--GQY-SLSYVDFTTG-------K-----ILKNI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 91.1530% -60 - C7 -2GU3 YPMB_BACSU A:[9-135] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEEGHEAAAAEAKKETDLAHVDQVET------------FV-GKE-KY-Y-------------VVKGTDKK-----------GTALYVW-----------V----PADK-KAKILSKE------A------KEGISE-DKAAK-----II------------KD-EG---LV-------SK------QKEVHLA--REG-----N---------VLLWEV--TYL--D---KE--GQY-SLSYVDFTTG-------K-----ILKNIT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 Fugue 75.0921% -23 - C4 -1SQJ - CBHRE_GEOS1 A:[4-786] YEFKNVAIGGGGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSW-------E-PVAGQPSSWLNRTTGAFPDKK-------PAS-------IAP--QP-----MKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNN------------QT-FPAGGF-C-------------GLSVDATN-----------PNRLVVI-----------TLDRDPGPA-LDSIYLS-------T------DAGAT----WKD------V------------TQ-LS---SP-------S-----------NLE--GNW-----G---------HPTNAA--RYK--D----G--TPV-PWLDFN--NG-------P-----QWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPEHLMYGTGATIWATDTLSRVEKDWAPSWYLQIDGIEENAILSLRSPKSGAALLSGIGDISGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGHEYDSACARGAYATDGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWSVPAGDLKAQTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVTGTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGASFTRVGTANATLVSVGAPKAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVNDQEHNYSGPTMIEADPKVYGRVYLGTNGRGIVYADLTNEEKSTAKCANGQKGTHCY
36 Fugue 67.7718% -32 - C5 -4PHR ? A:[1-277] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------SEFELMKRLSEIKVLPILESLKYIKHNHASVV-------R-FGDGEID--L-MTGHSIPYQD-------YNEKLAKRLQQIL--QTKSDEKLLVCLPDVFSNMDRYNQN-----------ARHFWERHFLKYSEFYLNCCDAPFYGSTFISRPYIDLIDK-SPSEAY-FESLKELWRGKDLLIVEGATSRSGVGNDLFVAASSIKRLV-----------C----PSKN-AFQYYDEI------L------R--LTE-KNAKN-----RLILVMLGPTAKVLVA-DL---TT-------KG------YQAIDLGH-IDS-----E---------YEWYEMGATYK--V---KL--TNK-HTAEFNYDEGIELEFSQE-----YQEQIVARIG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 Fugue 64.5714% -33 * C8 *1YPT - YOPH_YEREN A:[191-468] -------------------------------------------------------------------------------------------------------------------------------------------------------------------PEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRR-QTAVRAD--LNANYIQVGNTRTIACQYPLQSQLESHFRMLAENRT-----PVLAVLASSSEIANQRFG-----------MPDYFRQSGTYGSITVESKMTQQVGL------------GD-GIMADM-Y-------------TLTIREAG-----------QKTISVPVVHVGNWPDQTA----VSSE-VTKALASL------V------DQTAET-KRNMY-----ES------------KG-SS---AV-------ADDSKLRPVIHCRAG--VGR-----T---------AQLIGA--MCMNDS---RN--SQL-SVEDMVSQMR-------VQRNGIMVQKDEQLDVLIKLAEGQGRPLLNS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 59.5818% -40 - C9 -4J38 ? A:[20-151] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSKFTVKIKN-------K-DKSGNW---TDLGDLVVRKEE-------N--------GIDT--GL-----NAGGHSATFFSLE------------------EEVVNNFVKVMTEGGSFKTSLYYG------------YK-EEQSV-------------------INGIQ-----------NKEIITK-----------I----EKID--GTEYITF------S------GDKIKN-SGDKV-----A---------------------------------------------------------------------EY--AIS--L---EE--LKK-NLK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 59.0113% -85 - C7 -3DB7 ? A:[18-125] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQFIKQHFSDSKVALAKM------------ESDFLY-KS-Y-------------EVIFTN-------------G--NKVE-----------F----DKKG-N--WEEVDCKHTSVP------VAIIP--AAIQK-----YV------------TT-NY---PD-------AK------VLKIERD--------------------KKDYEV--KLS--N---R-----T-EL-KFDL-KF-------N-----LIDI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 58.8017% -76 * C9 *2JH2 - OGA_CLOP1 A:[7-139] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVTGSVS--LEALE---------------EVQVGENLEVGV--GI-----DELVNAEAF---------------------------------------AYDFTLN------------YD-ENAFEY-V-------------EAISDDG---------------VFVN-----------A----KKIE-DGKVRVLV------S------S--LTG-EPL-------------------------P---AK-------EV------LAKVVLRAEAKA-----E---------GSNLSVTNSSV--G---DG--EG--LVHEIAGTEK-------T-----VNIIE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 Fugue 58.5016% 15 - C3 -2LIQ ? A:[1-153] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGHHHHH-------H-HHSGD---------------S-------PAVTLSAG-----------------------NYIIYNRVL-----------SPRGEKLALTYPGRQ---RTPVTVSP------------LD-GSSEQA-W-------------ILRSYDS------------NSNTWTI-----------S----PVGS-PNSQIGWG------A------GNVPVV-LPPNN-----YV------------WT-LT---LT-------SG------GYNIQDG----K-----R---------TVSWSL--NNA--T---AG--EEV-SIGADATFSG-------R-----WVIEKV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 55.8024% 6 - C7 -3NQZ - ? A:[98-178] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V------SAKLTK-KDAIL-----KG------------SK-TG---IAAKSVGLKKH------NEQSRLA--IWVDDQNKA---------HLVYEV--SYV--TYGKSP--SRP-YL-IIDANTG-------E-----VLLSYDNL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 52.7424% -38 - C6 -2HEN EPHB2_MOUSE A:[30-120] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L----PGKR-EIFVAIKT------L------KSGYTE-KQRRDFLSEASI------------MG-QF---DH-------PN------VIHLEGV--VTK-----S---------TPVMII--TEF--M---EN--GSL-DSF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 52.686% -33 * C7 *4EXR ? A:[22-173] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NEN-------LMEQDFKVP--YTDAINIFKDKY-------KDADIVDLSLERD--LN-----KFVYTVEGV-----------------------------------------------------------D-DNNEYKMK-------------IDANTKDV-----------LEDKTEK-----------L----DSED-LNGVARKE------K------LDLNDIMTPQQAM----EI------------AL-KE---QN-------GI------VKEWSLD--KDL-----D---------VTFYKI--RID--K----D--KNE-YDIKVDSKKG-------T-----VLKVEKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 51.5824% -35 - C6 -3ZFM - A:[42-133] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L----PGKR-EIFVAIKT------L----------TE-KQRRDFLSEASI------------MG-QF---DH-------PN------VIHLEGV--VTK-----S---------TPVMII--TEF--M---EN--GSL-DSF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_CBE 50.8544% -17 - C6 -2YNT ? C:[121-152] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEFTL------------GN-GLIELY-Y---------------PGAGHT-----------EDNIVAW-----------L----PKSK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 Fugue 49.7515% 6 - C7 -4HLB ? A:[21-115] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSDRFTAFEEELLA------------RY-ADKGIR-S-------------VDVAAYAK-----------GIDIVFV-----------A----ADRKMTRAEFSAI------A------SRSIRE-LKERF-----GF------------DK-DV---PI-------GA------VLDYKKD--AAT-----D---------TRTRFV--LKL--R-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_CBE 49.4144% -1 * C6 *2YNT ? A:[121-152] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEFTL------------GN-GLIELY-Y---------------PGAGHT-----------EDNIVAW-----------L----PKSK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 49.016% -56 - C7 -3U1W ? A:[141-253] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEVSNLMEITFANAELLDIQQ------------N----S-LG-Y-------------ELDMIDN------------QIYKVAQ-----------L----NK-D-Y-RWQSTT------WAMS---EQEV-P-QIVMQ-----GF------------ESSAY---AS-------DK------VQSIYTL--LNA-----N---------GTFYLF--KVS--H---NG--QDK-TI-TFDV-FG-------N-----IV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 48.8715% -17 - C7 -2O3O YYCI_BACSU A:[170-252] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Q------K------ESLITE-MDAVE-----LL------------YY-QNQLKEY-------ST------VKSCKFG--YVA-----QYPLTSTQVLAPVWRI--TVE--Y---EKEKKTVQEYFTVNALES-------T-----ILDT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 48.739% -32 - C7 -3U1W ? A:[100-190] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IV-Y-------------KIEAEQS------------NSEVDLY-----------Y----SQY--G-NLIKAV------DDEINNDAPIVIP-KEVSN-----LM------------EI-TF---AN-------AE------LLDIQQN----S----------------LGYEL--DMI--D---NQ--IYK-VA-QLNK-DY-------R-----WQST---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------