@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1936: (2016-03-30 )
MTQKKVAILGAGSWGTGLALVLADNNHKPVIWGNLDKIVNEINESHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTILVHVSKGIEPETNLRMSEVIEEEIDAAKRKALVVLSGPSHAEEVALRHPTTLCASCKDLSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNPQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGKGENLDEVLEKMGMVVEGVRTAKAVHGWAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIEKESF

Atome Classification :

(20 SA) ----.........10........20-------..-------...------...30--..------------...-----..-----.40........50........60........70........80........90.----.-----...----.-..100....-...110-..--..-...-.120.......130.......140.......150--------.........160.......170--.--......180-.........190.......200.......210.......220...---....230.--..---.---...240.-......250.......260.....-.-.270....----...---280....--...290..--....---.300-........310.......320.-......330......---
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MTQKKVAILGAGSWGTGLALV-------LA-------DNN------HKPVI--WG------------NLD-----KI-----VNEINESHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQ----L-----NEA----L-KEPTILVHV-SKGIE--PE--TN-LRM-SEVIEEEIDAAKRKALVVLSGPSHAEEVALRH----------PTTLCASCKDLSAAEIVQDRFI--N--NNLRIYT---NDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALMTRGMAEI---TRLGVAVG--SN---P---QTFYGLT-GIGDLIVTCTSVHSRNWRAGNMLG-K-GENLDEVL----EKM---GMVVEGV--RTAKAVHG--WAKK---LDI--DMPITESIYAILFENKDAREAV-DLLMGREKKIEKESF---
2 PsiBlast_PDB 96.1037%-108 - C1 -3K96 GPDA_COXBU A:[32-352] ---------IAILGAGSWGTALALV-------LA-------RKG------QKVRL--WS------------YES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITR----M-----KPL----I-DAKTRIAWG-TKGLA--KG--SR-L-L-HEVVATELG---QVPMAVISGPSLATEVAANL----------PTAVSLASNNSQFSKDLIERLH--G--QRFRVYK---NDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEM---GRLVSVFG--GK---Q---ETLTGLA-GLGDLVLTCTDNQSRNRRFGLALG-E-GVDKKEAQ----QAI---GQAIEGL--YNTDQVHA--LAQK---HAI--EMPLTFQVHRILHEDLDPQQAV-QELLERS-----------
27 HHSearch 96.0437%-103 - C1 -3K96 GPDA_COXBU A:[27-352] ----PFKHPIAILGAGSWGTALALV-------LA-------RKG------QKVRL--WS------------YES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITR----M-----KPL----I-DAKTRIAWG-TKGLA--KG--S--RLL-HEVVATEL---GQVPMAVISGPSLATEVAANL----------PTAVSLASNNSQFSKDLIERLH--G--QRFRVYK---NDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEM---GRLVSVFG--GK---Q---ETLTGLA-GLGDLVLTCTDNQSRNRRFGLALG-E-GVDKKEAQ----QAI---GQAIEGL--YNTDQVHA--LAQK---HAI--EMPLTFQVHRILHEDLDPQQAV-QELLERS-----------
21 PsiBlast_CBE 95.1737%-107 - C1 -3K96 GPDA_COXBU B:[32-351] ---------IAILGAGSWGTALALV-------LA-------RKG------QKVRL--WS------------YES-----DH-----VDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITR----M-----KPL----I-DAKTRIAWG-TKGLA--KG--SR-L-L-HEVVATELG---QVPMAVISGPSLATEVAANL----------PTAVSLASNNSQFSKDLIERLH--G--QRFRVYK---NDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEM---GRLVSVFG--GK---Q---ETLTGLA-GLGDLVLTCTDNQSRNRRFGLALG-E-GVDKKEAQ----QAI---GQAIEGL--YNTDQVHA--LAQK---HAI--EMPLTFQVHRILHEDLDPQQAV-QELLER------------
28 HHSearch 93.1445% -99 - C1 -1Z82 ? A:[14-325] ------EMRFFVLGAGSWGTVFAQM-------LH-------ENG------EEVIL--WA------------RRK-----EI-----VDLINVSHTSP-YVEESK--ITVRATNDLEE-IKKEDILVIAIPVQYIREHLLR----L-----PV--------KPSMVLNL-SKGIE--IK--TG-KRV-SEIVEEIL---G-CPYAVLSGPSHAEEVAKKL----------PTAVTLAGENS---KELQKRIS--T--EYFRVYT---CEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEI---ARFGMFFG--AD---Q---KTFMGLA-GIGDLMVTCNSRYSRNRRFGELIA-RGFN-PLKLLES--S-----NQVVEGA--FTVKAVMK--IAKE---NKI--DMPISEEVYRVVYEGKPPLQSM-RDLMR-------------
1 PsiBlast_PDB 91.8142% -98 - C1 -1Z82 ? A:[14-325] ------EMRFFVLGAGSWGTVFAQM-------LH-------ENG------EEVIL--WA------------RRK-----EI-----VDLINVSHTSPYVEESKIT---VRATNDLEE-IKKEDILVIAIPVQYIR---EH----L-----LRL----P-VKPSMVLNL-SKGIE--IK--TG-KRV-SEIVEEILGCP----YAVLSGPSHAEEVAKKL----------PTAVTLAGEN---SKELQKRIS--T--EYFRVYT---CEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEI---ARFGMFFG--AD---Q---KTFMGLA-GIGDLMVTCNSRYSRNRRFGELIA-R-GFNPLKLL----ESS---NQVVEGA--FTVKAVMK--IAKE---NKI--DMPISEEVYRVVYEGKPPLQSM-RDLMR-------------
7 PsiBlast_PDB 89.9435%-109 - C1 -1M67 GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R------AVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
45 Fugue 89.2333%-102 * C1 *1EVY GPDA_LEIME A:[9-357] KDELLYLNKAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEK----SGGNLIAYA----K-EKQVPVLVC-TKGIE--RS--TL-KFP-AEIIGEFL---PSPLLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQRIMSTGD--RSFVCWA---TTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----------RAVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDAL-ADLLSCGLQDEGLPPLFK
5 PsiBlast_PDB 89.1835%-109 - C1 -1JDJ GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R------AVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
9 PsiBlast_PDB 88.9735%-109 - C1 -1N1G GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R------AVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
6 PsiBlast_PDB 88.8535%-107 - C1 -1M66 GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R------AVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
3 PsiBlast_PDB 88.7435%-110 - C1 -1EVY GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R------AVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
4 PsiBlast_PDB 88.7335%-108 - C1 -1EVZ GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R------AVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
22 PsiBlast_CBE 88.4135%-105 - C1 -1N1E GPDA_LEIME B:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----RTS---KAVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
8 PsiBlast_PDB 88.3435%-104 - C1 -1N1E GPDA_LEIME A:[17-343] --------KAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEKSGGNL-----IAY----A-KEKQVPVLVCTKGIE--RS--TL-KFP-AEIIGEFLPSP---LLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQ-RIM--S--TGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----RTS---KAVAEGV--ATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDALADLL---------------
26 HHSearch 88.0533%-104 - C1 -1EVY GPDA_LEIME A:[13-344] ----LYLNKAVVFGSGAFGTALAMV-------LS-------KKC------REVCV--WH------------MNE-----EE-----VRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPTQFLRGFFEK----S-----GGNLIAYAKEKQVPVLVC-TKGIE--RS--TL-KFP-AEIIGEFLP---SPLLSVLAGPSFAIEVATGV----------FTCVSIASADINVARRLQRIMS--TGDRSFVCWA---TTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI---RDLTAALG--GD---G---SAVFGLA-GLGDLQLTCSSELSRNFTVGKKLG-K-GLPIEEIQ----R--------AVAEGVATADPLMR--LAKQ---LKV--KMPLCHQIYEIVYKKKNPRDAL-ADLLS-------------
29 HHSearch 87.1430% -99 - C1 -1X0V GPDA_HUMAN A:[7-353] -----ASKKVCIVGSGNWGSAIAKI-------VGGNAAQLAQFD------PRVTM--WV------------FEE-----DIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQ----L-----KGH----L-KANATGISL-IKGVD--EGPNGL-KLI-SEVIGERLG----IPMSVLMGANIASEVADEK----------FCETTIGCKDPAQGQLLKELMQ--T--PNFRITV---VQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEM---IAFAKLFC--SGPVSS---ATFLESC-GVADLITTCYG--GRNRKVAEAFA-RTGKSIEQLEKELLN-----GQKLQGP--ETARELYS--ILQH---KGLVDKFPLFMAVYKVCYEGQPVGEFI-HCLQNHPEH---------
10 PsiBlast_PDB 83.5830% -95 - C1 -1WPQ GPDA_HUMAN A:[2-342] -----ASKKVCIVGSGNWGSAIAKIVGGNAAQLA-------QFD------PRVTM--WV------------FEEDIGGKKL-----TEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQ----L-----KGH----L-KANPTGISL-IKGVD--EG--PNGLKLISEVIGERLGIP----MSVLMGANIASEVADEK----------FCETTIGCKDPAQGQLLKELMQ--T--PNFRITV---VQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEM---IAFAKLFC--SG---PVSSATFLESC-GVADLITTCYG--GRNRKVAEAFA-R-TGKSIEQL----EKELLNGQKLQGP--ETARELYSILQHKG---LVD--KFPLFMAVYKVCYEGQPVGEFI-HCL---------------
13 PsiBlast_PDB 83.4429%-106 - C1 -4FGW - GPD1_YEAST A:[36-383] --------KVTVIGSGNWGTTIAKV-------VA-------ENCKGYPEVFAPIVQMWVFEEEI-------NGE-----KL-----TEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQ----L-----KGH----V-DSHVRAISC-LKGFEVGAK--GV-QLL-SSYITEELGIQ----CGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDH-KVLKALFH--R--PYFHVSV---IEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEI---IRFGQMFFPESR---E---ETYYQESAGVADLITTCAG--GRNVKVARLMATS-GKDAWECE----KELLN-GQSAQGL--ITCKEVHE--WLET---CGSVEDFPLFEAVYQIVYNNYPMKNLP-DMI---------------
14 PsiBlast_PDB 82.8729%-102 - C1 -2PLA GPD1L_HUMAN A:[7-344] --------KVCIVGSGNWGSAVAKI-------IG-------NNV------KKLQK--FASTVKMWVFEETVNGR-----KL-----TDIINNDHENVKYLPGHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDE----I-----TGR----V-PKKALGITL-IKGIDEGPE--GL-KLI-SDIIREKMGID----ISVLMGANIANEVAAEK----------FCETTIGSKVMENGLLFKELLQ--T--PNFRITV---VDDADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQ--VS---T---ATFLESC-GVADLITTCYG--GRNRRVAEAFA-RTGKTIEELE----KEMLN-GQKLQGP--QTSAEVYR--ILKQKGLLD---KFPLFTAVYQICYESRPVQEML-SCL---------------
11 PsiBlast_PDB 82.7130% -96 - C1 -1X0X GPDA_HUMAN A:[6-347] ----MASKKVCIVGSGNWGSAIAKIVGGNAAQLA-------QFD------PRVTM--WV------------FEEDIGGKKL-----TEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQ----L-----KGH----L-KANATGISL-IKGVD--EG--PNGLKLISEVIGERLGIP----MSVLMGANIASEVADEK----------FCETTIGCKDPAQGQLLKELMQ--T--PNFRITV---VQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEM---IAFAKLFC--SG---PVSSATFLESC-GVADLITTCYG--GRNRKVAEAFA-R-TGKSIEQL----EKELLNGQKLQGP--ETARELYSILQHKG---LVD--KFPLFMAVYKVCYEGQPVGEFI-HCL---------------