@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1970: (2016-03-30 )
MEKKIRTVLGDISKESLGFTYSHEHLWCCPPSVQKDRDFELTDYESSLEELKTFQSIGGQTLVDASTLDYGRDGNKLKTMSEESGVNVLGVTGFNKHIYFPDWVQEESIEQITDRLIYDIEKGMDGSDARAGILKSGSWYNLIHPLENKVTRAVAWAQKETGAPIWLHTEAGTMGQEMLAILEEEGVNMELVAVGHSDRNADPYYHLKLAEKGAYVQFDGCGKVKYYPDSTRVELVKNMLENGFGDKLLISGDMGRKSYLHAYGGGPGFRFIKTKFIPRLLEEGVTEQQIQTIFYDNPANWLAKF

Atome Classification :

(20 SA) .........10........20....-.------...30.-------------------...--.------------------------------...------40........50----.........60........70........80.....-----...90........100-.........110.......120...----------....130....-...140........150.......160.......170..-.--.....180.......190......-.200.......-.210.......-----------220---------.----....--------...-----------------230------------------.........240-.........250.--......260.-----.------...-----..270.......280.......290.......300...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MEKKIRTVLGDISKESLGFTYSHEH-L------WCCPPS-------------------VQK--D------------------------------RDF------ELTDYESSLEE-----LKTFQSIGGQTLVDASTLDYGRDGNKLKTMSEESGV-----NVLGVTGFNKHIYF---PDWVQEESIEQITDRLIYDIEKGMD----------GSDARAGILKS-GSWYN-LIHPLENKVTRAVAWAQKETGAPIWLHTEA-GT-M--GQEMLAILEEEGVNMELVAVGHSD-RN-ADPYYHLK-LAEKGAYVQFD-----------GC----------G----KVKY--------YPD-----------------S--------------------TRVELVKNML---ENGFGDKLLISGD--MGRKSYLHAY-----G------GGP-----GFRFIKTKFIPRLLEEGVTEQQIQTIFYDNPANWLAKF
30 HHSearch 92.7330% -59 - C3 -3K2G ? A:[12-354] RSGRIMTVDGPIPSSALGHTLMHEH-L------QNDCRC-------------------WWN--PPQEPERQYLAEAPISIEILSELRQDPFVNKHNI------ALDDLDLAIAE-----VKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGV-----QVVMGAGYYLASSM---PETAARLSADDIADEIVAEALEGTD----------GTDARIGLIGE-IGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLPG-WFRL--AHRVLDLVEEEGADLRHTVLCHMN-PSHMDPVYQAT-LAQRGAFLEFD-----------MI----------G----MDFFYADQGVQCPSD-----------------D--------------------EVARAILGLA---DHGYLDRILLSHD--VFVKMMLTRY-----G------G-N-----GYAFVTKHFLPRLRRHGLDDAALETLMVTNPRRVFDA-
25 PsiBlast_CBE 92.5232% -65 - C3 -4LEF PHP_ECOLI D:[3-291] -------------FDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKA------N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF---
26 PsiBlast_CBE 92.2032% -65 - C3 -4LEF PHP_ECOLI B:[3-291] -------------FDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKA------N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF---
27 PsiBlast_CBE 92.0132% -64 - C3 -4LEF PHP_ECOLI A:[2-291] ------------SFDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKA------N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF---
10 PsiBlast_PDB 91.7029% -61 - C3 -1I0D OPD_BREDI A:[3-326] ---RINTVRGPITISEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRLRSVEELTQFFLREIQYGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTAA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTA-LAARGYLIGLD-------------------------------H--------IPH-----------------SAIGLEDNASASALLGIRSWQTRALLIKALI---DQGYMKQILVSNDWLFGFSSYVTNI-----MDVMDRVNPD-----GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS--
1 PsiBlast_PDB 91.6832% -61 - C3 -4LEF PHP_ECOLI C:[3-291] -------------FDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKA------N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF---
8 PsiBlast_PDB 91.5429% -62 - C3 -1HZY OPD_BREDI A:[3-326] ---RINTVRGPITISEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRLRSVEELTQFFLREIQYGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTAA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTA-LAARGYLIGLD-------------------------------H--------IPH-----------------SAIGLEDNASASALLGIRSWQTRALLIKALI---DQGYMKQILVSNDWLFGFSSYVTNI-----MDVMDRVNPD-----GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS--
31 HHSearch 91.3833% -67 - C3 -1BF6 PHP_ECOLI A:[2-291] -------------FDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAE-IGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKAN-----G------G-Y-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ--
17 PsiBlast_PDB 91.3828% -56 - C3 -4ZST ? A:[8-331] ---RINTVRGPITISEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDCGRDVSLLAEVSRAADV-----HIVAATGL--WVDP---PLSMRLRSVEELTQFFLREIQYGIE----------DTGIRAGII-V-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTAA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTA-LAARGYLIGLD----------------------------QIPY--------SAIGLEDNASASVLMGNRSWQ--------------------TRALLIKALI---DQGYMKQILVSNDWLFGFSLYVTNI-----MDVMDRVNPD-----GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS--
2 PsiBlast_PDB 91.2832% -68 - C3 -1BF6 PHP_ECOLI A:[1-290] ------------SFDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKA------N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF---
53 Fugue 91.2331% -69 - C3 -1BF6 PHP_ECOLI A:[1-291] ------------SFDPTGYTLAHEH-L------HIDLSG-------------------FKNNVD------------------------------CRL------D--QYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-S-TM--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------GKNSY------------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITR-RSHLKA-----N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ--
3 PsiBlast_PDB 91.2234% -56 - C3 -3MSR ? A:[9-329] -----RTVLGDIPVEKLGITDCHDHFI------KNGGPE-------------------VEE--H------------------------------IDF------LMLNVDASIKE-----FKEFIDRGGSTIVTMDPPNVGRD--VLKTLEIANAVKNLGGNVIMSTGFHKAKFYDKYSSWLAVVPTEEIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKA-GTGYG-AIDRLELKALEVAARTSILTGCPILVHTQL-GT-M--ALEVAKHLIGFGANPDKIQISHLN-KN-PDKYYYEKVIKETGVTLCFD-----------GP----------D----RVKY--------YPD-----------------S--------------------LLAENIKYLV---DKGLQKHITLSLD--AGRILYQRNY-----G------LTKGKQTFGLAYLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLA--
4 PsiBlast_PDB 91.2128% -61 - C3 -3K2G ? A:[15-348] ---RIMTVDGPIPSSALGHTLMHEH-LQNDCRCWWNPPQEPERQYLAEAPISIEILSELRQ--DPFVNK-------------------------HNI------ALDDLDLAIAE-----VKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGV-----QVVMGAGYYLASSM---PETAARLSADDIADEIVAEALEGTD----------GTDARIGLIGE-IGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFR-L--AHRVLDLVEEEGADLRHTVLCHMNPSH-MDPVYQAT-LAQRGAFLEFD-----------MI----------G----MDFF--------YAD-----------------QGVQCP---------------SDDEVARAILGLADHGYLDRILLSHD--VFVKMMLTRY-----G------GN------GYAFVTKHFLPRLRRHGLDDAALETLMVTNP-------
9 PsiBlast_PDB 91.0529% -62 - C3 -1I0B OPD_BREDI A:[3-326] ---RINTVRGPITISEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRLRSVEELTQFFLREIQYGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTAA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTA-LAARGYLIGLD-------------------------------H--------IPH-----------------SAIGLEDNASASALLGIRSWQTRALLIKALI---DQGYMKQILVSNDWLFGFSSYVTNI-----MDVMDRVNPD-----GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS--
28 PsiBlast_CBE 90.8032% -68 - C3 -1BF6 PHP_ECOLI B:[1-290] ------------SFDPTGYTLAHEH-L------HIDLSG-------------------FKN--N------------------------------VDC------RLDQYAFICQE-----MNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGI-----NVVACTGYYQDAFF---PEHVATRSVQELAQEMVDEIEQGID----------GTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSF-ST-M--GLEQLALLQAHGVDLSRVTVGHCD-LK-DNLDNILK-MIDLGAYVQFD-----------TI----------G----KNSY--------YPD-----------------E--------------------KRIAMLHALR---DRGLLNRVMLSMD--ITRRSHLKA------N------GGY-----GYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF---
6 PsiBlast_PDB 90.7729% -60 - C3 -1PSC OPD_BREDI A:[36-359] ---RINTVRGPITISEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRLRSVEELTQFFLREIQYGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTAA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTA-LAARGYLIGLD-------------------------------H--------IPH-----------------SAIGLEDNASASALLGIRSWQTRALLIKALI---DQGYMKQILVSNDWLFGFSSYVTNI-----MDVMDRVNPD-----GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS--
15 PsiBlast_PDB 90.5529% -66 - C3 -4E3T OPD_BREDI A:[4-327] ---RINTVRGPITISEVGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWPEFFGSREALVEKAVRG-----LRRARAAGVRTIVDVSTFDLGRDVRLLAEVSRAADV-----HIVAATGV--WLDP---PLSIRMRSVEELTQFFLREIQYGIE----------DTGIRAGIIKV--AITG-KVTPFQELVLRAAARASLATGVPVITHT-A-GS-QRGGEQQAAIFESEGLSPSRVCIGHSD-ET-DDLSYLTA-LAARGYLIGLD-----------RIPHSAIGLEDNA----SATA--------FMG-----------------SRSWQ----------------TRALLIKALI---DQGYMKQILVSNDWLFGISSYVTNFMDVMDS------VNPD----GMAFIPLRVIPFLREKGIPQETLAGITVTNPARFLS--
11 PsiBlast_PDB 90.4329% -65 - C3 -1PTA - OPD_BREDI A:[36-359] ---RINTVRGPITISEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRLRSVEELTQFFLREIQYGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTAA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTA-LAARGYLIGLD-------------------------------H--------IPH-----------------SAIALLGIRSWQ---------TRALLIKALI---DQGYMKQILVSNDWLFGFSSYVTNI-----MDVMDRVNPD-----GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS--
12 PsiBlast_PDB 90.3229% -62 - C3 -2D2G ? A:[5-327] ----INTVRGPIPVSEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRHARAAGVQTIVDVSTFDIGRDVRLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRMRSVEELTQFFLREIQHGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTSA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTG-LAARGYLVGLDRMPYSAIGLEGNA----------S----ALAL--------FGTRSW--------------Q--------------------TRALLIKALI---DRGYKDRILVSHDWLFGFSSYVTNI-----MDVMDRINPD-----GMAFVPLRVIPFLREKGVPPETLAGVTVANPARFLS--
14 PsiBlast_PDB 90.2429% -61 - C3 -2D2J ? A:[5-327] ----INTVRGPIPVSEAGFTLTHEH-I--------CGSS-------------------AGF--L------------------------------RAWP-----EFFGSRKALAEKAVRGLRHARAAGVQTIVDVSTFDIGRDVRLLAEVSRAADV-----HIVAATG----LWFDP-PLSMRMRSVEELTQFFLREIQHGIE----------DTGIRAGIIKV-AT-TG-KATPFQELVLKAAARASLATGVPVTTHTSA-SQ-RD-GEQQAAIFESEGLSPSRVCIGHSD-DT-DDLSYLTG-LAARGYLVGLDRMPYSAIGLEGNA----------S----ALAL--------FGTRSW--------------Q--------------------TRALLIKALI---DRGYKDRILVSHDWLFGFSSYVTNI-----MDVMDRINPD-----GMAFVPLRVIPFLREKGVPPETLAGVTVANPARFLS--