@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2095: (2016-03-31 )
MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPEAGFTVSQTNKVNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENVRKLAEKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER

Atome Classification :

(20 SA) -.........10...-----.....20........30........40........50........60..-......70........80........90........100..-.....110...---.----...-120.......130..-.....140.......150.......160.......170---......--.-180........190...----....200---.---...----.---..-.210.----.------......220.......230.......240.......250.......260..-.-....270--.......280.....-..290.......300.......310
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -MIYTITLNPAIDRL-----LFIQGELEKRKTNRVKKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQ---T----NKV-NLLKQIAKKVKKEDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE--M-G-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----V---RK-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMN-M-PITETLK--VATGCSASKVMQQDS-SSFDLEAAGKLKNQVSIIQLEER
3 PsiBlast_PDB 98.0596%-100 - C1 -3IE7 ? A:[3-310] -LIYTITLNPAIDRL-----LFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQ---T----NKD-NLLKQIAKKVKKEDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE--M-G-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----I---RT-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMN-M-PITETLK--VATGCSASKVMQQDS-SSFDLEAAGKLKNQVSIIQLE--
1 PsiBlast_PDB 97.9597% -99 - C1 -3Q1Y ? A:[3-311] -LIYTITLNPAIDRL-----LFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQ---T----NKD-NLLKQIAKKVKKEDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE--M-G-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----I---RT-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMN-M-PITETLK--VATGCSASAVMQQDS-SSFDLEAAGKLKNQVSIIQLEE-
2 PsiBlast_PDB 97.2796%-101 - C1 -3HIC ? A:[3-311] -LIYTITLNPAIDRL-----LFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQ---T----NKD-NLLKQIAKKVKKEDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE--M-G-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----I---RT-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMN-M-PITETLK--VATGCSASKVMQQ-----FDLEAAGKLKNQVSIIQLEE-
56 HHSearch 96.7995% -99 - C1 -3IE7 ? A:[3-310] -LIYTITLNPAIDRL-----LFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNL-DKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQTNKD----NLLKQIAKKVKK----EDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE--M-G-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----I---RT-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMN-M-PITETLK--VATGCSASKVMQQDS-SSFDLEAAGKLKNQVSIIQLE--
4 PsiBlast_PDB 95.4696%-107 - C1 -3JUL ? A:[3-310] -LIYTITLNPAIDRL-----LFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQ---T----NKD-NLLKQIAKKVKKEDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE--M-G-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----I---RT-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPP-------TGAGDVFVGAFIAGLAMN-M-PITETLK--VATGCSASKVMQQ-----FDLEAAGKLKNQVSIIQLE--
76 Fugue 92.4293% -91 - C1 -3HIC ? A:[2-311] SLIYTITLNPAIDRL-----LFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPEA-GFTVSQ---T----NKD-NLLKQIAKK-VKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY---LNLAVE---MG-VDFIKPNEDEVIAIL----DEKTNS----L---EEN----I---RT-LA-EK----I------PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGL--AMNMPITETLK--VATGCSASK-----VMQQFDLEAAGKLKNQVSIIQLEE-
15 PsiBlast_PDB 71.6427% -88 - C1 -2JGV - LACC_STAA8 A:[22-330] --ILTLTLNPSVD-I-----SYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGE-LGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQ--QT-EILEQGPEIDN---Q----EAA-GFIKHFEQLLEKVEA-VAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGAT---LQTVLENPY-K-PTVIKPNISELYQLLNQPLDESLES----L---KQA----V---SQPLF-EG----I------EWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNH-E-NDHDLLK--KANTLGMLNAQEAQT-GYVNLNNYDDLFNQIEVLEV---
17 PsiBlast_PDB 70.1727% -84 - C1 -2JG1 LACC_STAA8 A:[22-330] --ILTLTLNPSVD-I-----SYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGE-LGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQ--QT-EILEQGPEIDN---Q----EAA-GFIKHFEQMMEKVEA-VAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGAT---LQTVLENPY-K-PTVIKPNISELYQLLNQPLDESLES----L---KQA----V---SQPLF-EG----I------EWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNH-E-NDHDLLK--KANTLGMLNAQEAQT-GYVNLNNYDDLFNQIEVLEV---
16 PsiBlast_PDB 68.5227% -82 - C1 -2Q5R - LACC_STAAC A:[2-310] --ILTLTLNPSVD-I-----SYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGE-LGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQ--QT-EILEQGPEIDN---Q----EAA-GFIKHFEQLLEKVEA-VAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGAT---LQTVLENPY-K-PTVIKPNISELYQLLNQPLDESLES----L---KQA----V---SQPLF-EG----I------EWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNH-E-NDHDLLK--KANTLGMLNAQEAQT-GYVNLNNYDDLFNQIEVLEV---
14 PsiBlast_PDB 68.1527% -96 - C1 -3UQD PFKB_ECOLI A:[4-287] --IYTLTLAPSLDSATITPQIYPEGKL------RCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV-ATVEAKDWTRQNLHVHVEASGEQY-RFVMPGAALNE---D----EFR-QLEEQVLE-IESGAI-LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA---LSAALA--I-GNIELVKPNQKELSALV----NRELTQ--------PDD----V---RK-AA-QE----IVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A-SLEEMVRFGVAAGSAAT-------------------------------
11 PsiBlast_PDB 67.8627% -97 - C1 -3N1C PFKB_ECOLI A:[4-287] --IYTLTLAPSLDSATITPQIYPEGKL------RCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV-ATVEAKDWTRQNLHVHVEASGEQY-RFVMPGAALNE---D----EFR-QLEEQVLE-IESGAI-LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA---LSAALA--I-GNIELVKPNQKELSALV----NRELTQ--------PDD----V---RK-AA-QE----IVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A-SLEEMVRFGVAAGSAAT-------------------------------
9 PsiBlast_PDB 67.6227% -79 - C1 -2F02 LACC_ENTFA A:[3-313] -LIVTVTMNPSID-I-----SYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAF-TSIKEETRDSIAILHE--GNQT-EILEAGPTVSP---E----EIS-NFLENFDQLIKQAEI-VTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS---LRQVLQGPW-K-PYLIKPNLEELEGLLGQ--DFSENP----L---AAV----Q---TA-LT-KPMFAGI------EWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKD-A-PAAELLK--WGMAAGMANAQERMT-GHVDVENVKKHLMNIQVVEI---
5 PsiBlast_PDB 67.5430% -77 - C1 -2JG5 - ? A:[1-304] -MIYTVTFNPSIDYV-----IFTN-DFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGF-PGKFIIDTLNNSAIQSNF-IEVDEDTR---INVKLKTGQET-EINAPGPHITS---T----QFE-QLLQQI-KNTTSEDI-VIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL---AESVLP--Y-H-PLFIKPNKDELEVMF----NTTVNS----D---ADV----IKYGRL-LV-DKG---A------QSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASG-L-SIEKAFQ--QAVACGTATAFDEDL-ATRD--AIEKIKSQVTISVLD--
7 PsiBlast_PDB 67.5228% -89 - C1 -3UQE PFKB_ECOLI A:[4-289] --IYTLTLAPSLDSA-----T-ITPQIDPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV-ATVEAKDWTRQNLHVHVEASGEQY-RFVMPGAALNE---D----EFR-QLEEQVLE-IESGAI-LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA---LSAALA--I-GNIELVKPNQKELSALV----NRELTQ--------PDD----V---RK-AA-QE----IVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A-SLEEMVRFGVAAGSAAT-------------------------------
10 PsiBlast_PDB 67.3627% -94 - C1 -3CQD PFKB_ECOLI A:[4-292] --IYTLTLAPSLDSATITPQIYPEGKL------RCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV-ATVEAKDWTRQNLHVHVEASGEQY-RFVMPGAALNE---D----EFR-QLEEQVLE-IESGAI-LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA---LSAALA--I-GNIELVKPNQKELSALV----NRELTQ--------PDD----V---RK-AA-QE----IVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A-SLEEMVRFGVAAGSAAT-------------------------------
8 PsiBlast_PDB 67.2327% -79 - C1 -2AWD LACC_ENTFA A:[3-313] -LIVTVTMNPSID-I-----SYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAF-TSIKEETRDSIAILHE--GNQT-EILEAGPTVSP---E----EIS-NFLENFDQLIKQAEI-VTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS---LRQVLQGPW-K-PYLIKPNLEELEGLLGQ--DFSENP----L---AAV----Q---TA-LT-KPMFAGI------EWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKD-A-PAAELLK--WGMAAGMANAQERMT-GHVDVENVKKHLMNIQVVEI---
58 HHSearch 66.8330% -80 - C1 -2JG5 - ? A:[1-304] -MIYTVTFNPSIDYV-----IFTNDFK-IDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGF-PGKFIIDTLNNSAIQSNFIEVD-EDTRINVKL--K-TGQET-EINAPGPHITS---T----QFE-QLLQQIKN-TTSEDI-VIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL---AESVL---PYH-PLFIKPNKDELEVMF----NTTVNS----DADVIKY----G---RL-LVDKG----A------QSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASG-L-SIEKAFQ--QAVACGTATAFDED---LATRDAIEKIKSQVTISVLD--
60 HHSearch 66.6727% -79 * C1 *2F02 LACC_ENTFA A:[3-314] -LIVTVTMNPSIDIS-----YLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAFTSI-KEETRDSIAILHE--GNQT-EILEAGPTVSP---E----EIS-NFLENFDQLIKQAEI-VTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS---LRQVLQGPW-K-PYLIKPNLEELEGLL----GQDFSEN---P---LAAVQTAL---TK-PMFAG----I------EWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKD-A-PAAELLK--WGMAAGMANAQERMT-GHVDVENVKKHLMNIQVVEIA--
13 PsiBlast_PDB 65.9827% -94 - C1 -3UMP PFKB_ECOLI A:[4-287] --IYTLTLAPSLDSATITPQIYPEGKL------RCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV-ATVEAKDWTRQNLHVHVEASGEQY-RFVMPGAALNE---D----EFR-QLEEQVLE-IESGAI-LVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA---LSAALA--I-GNIELVKPNQKELSALV----NRELTQ--------PDD----V---RK-AA-QE----IVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAEN-A-SLEEMVRFGVAAGSAAT-------------------------------
57 HHSearch 65.8127% -80 - C1 -2JG1 LACC_STAA8 A:[21-330] -MILTLTLNPSVDIS-----YPLT-ALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGGE-LGQFIAKKLDHADIKHAFYNI-KGETRNCIAILH--EGQQT-EILEQGPEIDN---QEAAGFIK-HFEQMMEK----VEA-VAISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGATLQTVLENP---Y-K-PTVIKPNISELYQLL----NQPLDESLESL---KQA----V---SQ-PLFEG----I------EWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNH-E-NDHDLLK--KANTLGMLNAQEAQT-GYVNLNNYDDLFNQIEVLEV---