@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2106: (2016-03-31 )
MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSEFGDKNEKLLHKVENLNPDVIAITGDLFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYEDDYKPFLEKMGVVNLEDKTATIDVGGQKFQMSGLRSSANLDYDYSYYKKGLAEIQTQQDSQYYQVLLSHMPDYFKLYVENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK

Atome Classification :

(20 SA) .........10........20........30........40---........50...-------..----------.-.----------------------.----------60------..-------.......70-.--.-----.......80..-....-.--------.-------90---..-----......----------------.--100.-----.......110..--.....--------------120.......130-----.-.-.-.-----.---------..---------140-..-.---------....150.......-.160--------...----....170..-...---.--.---180..--...----..190-----------------....-----------------.------------------.--..200-........210---------......--..220.......230.......240...--...---.250.......260..-..--------...270.......280--....---------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIE---KEIKLVQLSDLHF-------SE----------F-G----------------------D----------K-------NE-------KLLHKVEN--L--N-----PDVIAITGDLF-DRQG-D--------S-------V----PK-----ELIKKL----------------T--KI-A-----PVYFSPGNHEYD--VKNAY--------------EDDYKPFLEKMGV-----V-N-L-E-----D---------KT---------ATI-DV-G---------GQKFQ-MSGLRSSA-NLDY--------DYS----YYKKGLAEI-QTQ---Q--D---SQYYQ--VLL----SHMP------------------DYFK-----------------L------------------Y--VEN-D-FDLTLSGHTH----------GGIVRI--PYTNIGAIAPGPQRTILPEYVYGEHSKN--GKT---MIISAGLGAGSLHQKA-FP--------RLGNPYEIVAVTIK----PELK---------------------------------
47 HHSearch 77.9920% -53 - C2 -3T1I MRE11_HUMAN A:[31-274] --------------------------------------------NTFKILVATDIHL-------GFM---------E-KD---------------------AVRGNDTFV--T-------LD-------EILRLAQE--N--E-----VDFILLGGDLF-HENK-P--------SRKTL---HT---CL-----ELLRKYCMGDRPVQFEILSDQLN--IS-I-----PVFSIHGNHDDP--TGADA---------------LCALDILSCAGF-----VNH-F-G-----RSMSVEKIDISP---------VLL-QK-G---------STKIA-LYGLGSIP-DERL--------YRM----FVNKKVTML-RPK---E--DE--NSWFN--LFV----IHQN------------------RSKHGSTNFIPE---------Q------------------F--LDD-F-IDLVIWGHEH----------ECKIAP--T---------------------------------------------------------------------------------------------------------------------
68 Fugue 73.0117% -45 - C2 -2DXN ? A:[1-271] ----------------------------------------------MLLAHISDTHF-------RS----------R-G----------------------E----------KLYGFIDVNA-------ANADVVSQ--L--NALRERPDAVVVSGDIV-NCGR-P--------E-------E----YQ-----VARQIL----------------G--SLNY-----PLYLIPGNH--D--DKALF--------------LEYLQPLCPQLGS-----------D-----A---------NN---------MRC-AV-D---------DFATR-LLFIDSSR-AGTS--------KGW----LTDETISWL-EAQ---L--F---EGGDKPATIF----MHHPPLPLGNAQMDPIACENGHRLLA-----------------L------------------V--ERF-PSLTRIFCGHNH----------SLTMTQYRQALISTLPGTVHQVPYCHEDTDPYYDLS--PAS---CLMHRQVGEQWVSYQHSLA--------HYAGPWLYDENISC----PT-----------------------------------
41 HHSearch 71.3719% -37 * C2 *2XMO ? A:[38-290] --------------------------------------------RNLSMVVTTDVHY-------FAP---------S-LTDNGKAFEKYVAAGDGKQLAYSDE---------I-------TD-------AFLADVES--K--K-----TDVLIISGDLT-NNGE-K--------TSH-----EE---LA-----KKLTQV----------------EK-NG-T-----QVFVVPGNHDIN--NPWARKFEKDKQLPTDTISPTDFSKIYSDFGY-----E-DAI-SSDEFSL---------SY---------LAA----P---------SSKVW-LLMLDTAI-YKTNMQQGNPTTEGG----LTAGTLDWIKESS---AL-AKK-NGAKL--IPV----LHHN------------------LTDHNDVKGYTINYNQ-----QVIDA--------------L--TEG-A-MDFSLSGHIH----------TQNIRS--A---------------------------------------------------------------------------------------------------------------------
63 Fugue 69.2515% -42 - C2 -3IB7 CPDA_MYCTU A:[16-310] ---------------------------------LRAAEHPR---PDYVLLHISDTHL-------IGGDRRLYGAVDA-D----------------------D----------R-------LG-------ELLEQLNQ--S--GLR---PDAIVFTGDLA-DKGE-P--------A-------A----YR-----KLRGLV----------------E--PF-AAQLGAELVWVMGNH-------------------------DDRAELRKFLLD-----E-A-P-S-----M---------AP---------LDR-VC-M---------IDGLR-IIVLDTSV-PGHH--------HGE----IRASQLGWL-AEELATP--A---PDGTI--LAL----HHPPIPSVLDMAVTVELRDQA-ALGR-----------------V------------------L--RGT-D-VRAILAGHLH----------YSTNAT--FVGIPVSVASATCYTQDLTVAAGGTRGR--DGAQGCNLVHVYPDTVVHSVIP-LG--------GGETVGTFVSPGQA----RRKIAESGIFIEPSRRD--------------------
70 Fugue 67.7914% -49 - C2 -4KBP PPAF_PHAVU A:[121-432] ------------------------------------QTGLD---VPYTFGLIGDLGQ-------SF----------D-S----------------------N----------T-------TL-------SHYELSPK-----K-----GQTVLFVGDLS-YADR-YPNHDNVRWD-------T----WG-----RFTERS----------------V--AY-Q-----PWIWTAGNHEIEFAPEINE--------------TEPFKPFSYRYHV-----P-Y-E-A-----S---------QSTSPFW----YSI-KR-A---------SAHIIVLSSYSAYG-RGTP--------QYT----WLKKELRKV-K-----R--S---ETPWL--IVL----MHSPLYNSYNHHFMEGEAMRT-KFEA-----------------W------------------F--VKY-K-VDVVFAGHVH------------------AYERSERVSNIAYKI-TDGLCTPVKDQS--APV---YITIGDAGNYGVIDSN-MIQPQPEYSAFREASFGHGMFDIK----NRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDDST
64 Fugue 66.3813% -49 - C2 -1T71 Y349_MYCPN A:[1-281] ---------------------------------------MM---NSIKFIFLGDVYG-------KA----------G-R----------------------N----------I-------IK-------NNLAQLKS--KY-Q-----ADLVIVNAENT-TH-G-K--------G-------L----SL-----KHYEFL----------------K--EA-G-----VNYITMGNHTWF---QKLD--------------LAVVINKKDLVRP-----L-N-L-D-----T---------SFAFHNLGQGSLVF-EF-N---------KAKIR-ITNLLGTSVPLPF--------KTT----NPFKVLKEL-ILK---R--D---CDLHI--VDFHAETTSEK------------------NAFC-----------------M------------------A--FDG-Y-VTTIFGTHTHVPSADLRITPKGSAYI--TDVGMCGPGFGSVIGANPEQSIRLFCAGSREHF---EVSKCGAQLNGVFFEV-DV--------NTKKVIKTEAIRIV----EDDPRYLKQDYFNLI----------------------
62 Fugue 65.8317% -42 - C2 -2HY1 CPDA_MYCTU A:[12-267] ---------------------------------------PR---PDYVLLHISDTHL-------ID----------A-D----------------------D----------R-------LG-------ELLEQLNQ--S--GLR---PDAIVFTGDLA-DKGE-P--------A-------A----YR-----KLRGLV----------------E--PF-AAQLGAELVWVMGNH-------------------------DDRAELRKFLLD-----E-A-P-S-----M---------AP---------LDR-VC-M---------IDGLR-IIVLDTSV-PGHH--------HGE----IRASQLGWL-AEELA-T--P---APDGT--ILA----LHHP-------------------PIP-----------------S------------------V--LDM-A-VTVELRD-QA----------ALGRVL--RGTDVRAILAGHLHY-------STNATF--VGI---PVSVASATCGCNLVHV-YP--------DT------VVHSVI----P------------------------------------
51 HHSearch 64.6619% -44 - C2 -1II7 MRE11_PYRFU A:[1-214] ----------------------------------------------MKFAHLADIHL-------GYE---------Q-FHKP-------------------QREEEFAE---A-------FK-------NALEIAVQ--E--N-----VDFILIAGDLF-HSSR-P--------SP------GTLKKAI-----ALLQIP----------------KE-HS-I-----PVFAIEGNHDRT--QRGP-----------------SVLNLLEDFGLV----Y-V-I-G-----MRKEKVEN--EY---------LTSERL-GNGEYLVKGVYKDLE-IHGMKYMS-SAW---------------------FEANKEIL---KRLFR--PTDNA--ILM----LHQG------------------VREV-----------------SEARGEDYFEIG-------LGDLPE-G-YLYYALGHIH----------KRYETS------------------------------------------------------------------------------------------------------------------------
48 HHSearch 64.6322% -54 - C2 -3AV0 MRE11_METJA A:[19-213] --------------------------------------------SHMMFVHIADNHL-------GYR---------Q-Y----------------------NLDDREKDIYDS-------FK-------LCIKKILE--I--K-----PDVVLHSGDLF-NDLR-P--------PVKAL---RI---AM-----QAFKKL----------------HE-NN-I-----KVYIVAGNHEMP--RRLGE---------------ESPLALLKD-YV-----K-I-L-D-----G---------KD----------VI-NV-N---------GEEIF-ICGTYYHK-KSK-----------------REEMLDKLKNFE---SE-AK--NYKKK--ILM----LHQG------------------INPYIPLDYELE---------H------------------F--DLP-K-FSYYALGHIH----------KRILE-------------------------------------------------------------------------------------------------------------------------
46 HHSearch 64.0615% -42 - C2 -1XZW PPAF1_IPOBA A:[125-363] --------------------------------------------VPYVFGLIGDIGQ-------THD---------S-N----------------------T----------T-------LT-------HYEQ--NS--A--K-----GQAVLFMGDLS-YSNR-W--------PNHDNNRWDT---WG-----RFSERS----------------V--AY-Q-----PWIWTAGNHEID--YAPDIGE------------YQPFVPFTNRYPTPHEASG-S-G-D-----P---------LW---------YAI-KR------------ASAH-IIVLSSYS-GFV----------------KYSPQYKWFTSEL---EK-VNRSETPWL--IVL----VHAP------------------LYNS-----------------YEAHYMEGEAMRAIFEPY-F--VYY-K-VDIVFSGHVH----------SYERSE--RVS--NVAY---N---IVNAKCTPVSDE--SAP---VYITIGDGGN------------------------------------------------------------------------
69 Fugue 61.2813% -15 - C2 -3QFM ? A:[11-268] ---------------------------------------------MTKIALLSDIHG-------N-------------T----------------------T----------A-------LE-------AVLADARQ--L--G-----VDEYWLLGDIL-MPGT-G---------------------RR-----RILDLL----------------D--QL-P-----ITARVLGNWEDS--LWHGV--------------RKELDSTRPSQRY-----L-L-R-Q-----C---------QY---------VLE-EI-S---------LEEIE-VLH-NQPL-QIHR--------QFG----DLTVGISHH-LPD---K--N---WGREL--IHT----GKQE------------------EFDR-----------------L------------------V--THP-P-CDIAVYGHIH----------QQLLRY--GTGGQLIVNPG--SIGQPFFLDAQLRKD--LRA---QYMILEFDDKGLVDMD-FR--------RVDYDVAAELQLAKDLRLPYFEVYYESLVNGIHHTHHQEFL--------------
43 HHSearch 60.5817% -51 - C2 -3D03 ? A:[1-203] ----------------------------------------------MLLAHISDTHF-------RSR---------G-EKLYGFIDVN-------------A----------A-------NA-------DVVSQLNA--LRER-----PDAVVVSGDIV-NCGR-P--------E-------EYQV-AR-----QILGSL--------------------N-Y-----PLYLIPGNHDDK--ALFL----------------EYLQPLCPQLGS-----D---A-N-----N---------MR---------CAV-D------------DFATR-LLFIDSSR-AGTS--------KGW----LTDETISWLEAQL---F--EG--GDKPA--TIF----MHHP------------------PLPL-----------------GNAQMDPIACENGHRLLALV--ERFPS-LTRIFCGHNH----------SLTMTQ------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 59.8930%-128 - C2 -4O24 ? A:[16-107] --------------------------------------------KELKILHTSDWHLGVTSWTSSR----------P-V----------------------D----------R-------REELKKALDKVVEEAEK--R--E-----VDLILLTGDLLHSRNN-P--------S-------V----VALHDLLDYLKRM----------------M--RT-A-----PVVVLPGNHDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 59.8330%-120 - C2 -4O4K ? A:[17-108] --------------------------------------------KELKILHTSDWHLGVTSWTSSR----------P-V----------------------D----------R-------REELKKALDKVVEEAEK--R--E-----VDLILLTGDLLHSRNN-P--------S-------V----VALHDLLDYLKRM----------------M--RT-A-----PVVVLPGNHDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 59.7030%-123 - C2 -4NZV ? A:[17-108] --------------------------------------------KELKILHTSDWHLGVTSWTSSR----------P-V----------------------D----------R-------REELKKALDKVVEEAEK--R--E-----VDLILLTGDLLHSRNN-P--------S-------V----VALHDLLDYLKRM----------------M--RT-A-----PVVVLPGNHDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 59.4130%-118 - C2 -4O5G ? A:[17-108] --------------------------------------------KELKILHTSDWHLGVTSWTSSR----------P-V----------------------D----------R-------REELKKALDKVVEEAEK--R--E-----VDLILLTGDLLHSRNN-P--------S-------V----VALHDLLDYLKRM----------------M--RT-A-----PVVVLPGNHDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52 HHSearch 59.2717% -61 - C2 -3THO RAD50_THEMA B:[1-218] ----------------------------------------------MKILHTSDWHL-------GVT---------SWTSSRPV-----------------DRREELKK---A-------LD-------KVVEEAEK--R--E-----VDLILLTGDLL-HSRNNP--------SVVAL---HD---LL-----DYLKRM----------------M--RT-A-----PVVVLPGNQDWK--GLKLF---------------GNFVTSIS-SDI-----T-F-VMS-----F---------EP---------VDV-EAKR---------GQKVR-ILPFPYPD-ES------------KNEGDFRFFLESRLNKLY---EEALK--KEDFA--IFM----GHFT------------------VEGLAGREIIINR--------A------------------L--IPS-V-VDYAALGHIH----------SFREIQ------------------------------------------------------------------------------------------------------------------------
42 HHSearch 59.2119% -51 - C2 -3IB7 CPDA_MYCTU A:[16-228] ----------------------------------LRAAEHPR--PDYVLLHISDTHL-------IGG---------D-RRLYGAVDA--------------DD---------R-------LG-------ELLEQLNQSGL--R-----PDAIVFTGDLA-DKGE-P--------A-------AYRK-LR-----GLVEPF----------------AAQLG-A-----ELVWVMGNHDDR--AELR--------------------KFLLDEAP-------S-M-A-----P---------LD---------RVC-MI------------DGLR-IIVLDTSV-PGHH--------HGE----IRASQLGWLAEEL---A--TP--APDGT--ILA----LHHP------------------PIPSVLDMAVTVELRDQAALGRV-----------------L--RGT-D-VRAILAGHLH----------YSTNAT--F---------------------------------------------------------------------------------------------------------------------
44 HHSearch 58.5314% -36 - C2 -2QFP PPAF_PHAVU A:[106-356] --------------------------------FSFITPPQTGLDVPYTFGLIGDLGQ-------SFD---------S-N----------------------T----------T-------LS-------HY--ELSP--K--K-----GQTVLFVGDLS-YADR-Y--------PNHDNVRWDT---WG-----RFTERS----------------V--AY-Q-----PWIWTAGNHEIE--FAPEINE------------TEPFKPFSYRYHVPYEASQ-S-T-S-----P---------FW---------YSI-KR------------ASAH-IIVLSSYS-AYG----------------RGTPQYTWLKKEL---RK-VKRSETPWL--IVL----MHSP------------------LYNSYNHHFMEGEAMRTKFEAW------------------F--VKY-K-VDVVFAGHVH----------AYERSE--RVS--N-I---AYK--ITNGLCTPVKDQ--SAP---VYITIGDAGN------------------------------------------------------------------------
3 PsiBlast_PDB 58.5130%-111 - C2 -4O43 ? A:[17-108] --------------------------------------------KELKILHTSDWHLGVTSWTSSR----------P-V----------------------D----------R-------REELKKALDKVVEEAEK--R--E-----VDLILLTGDLLHSRNN-P--------S-------V----VALHDLLDYLKRM----------------M--RT-A-----PVVVLPGNHDW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------