@TOME V2.3
(Nov 2016)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2111: (2016-04-01 )
MNDVLTLLRNHRSFRKYKKGVEIPEEKLDAIIRAAQAAPSWINGQHYSIIAIKDQERKNKMAELCGNQPYIAECSVFLCFVADFHRVKVASDMHGKSFQIAGEEDLLMVAATDIGLCMQNALTAAESLDYGTICIGGLRRNITATAGFLNLPEFVMPVVGLCIGVPDVEAPVKPRLPKEAVYFEETYQTDVMPLLEAYDQEIIPFSEREGFVSYTERLAKFYDRPYYPNLTEQIKERGFLGGK

Atome Classification :

(20 SA) .........10........20........30........40........50........60....-.-...70....-....80---------.....----------------.-.-..90--..---.---.-----.------------------------.-------------.-------------.--.----------------100--.------.------...--...110.......120.......130......-.140.......150..-.-.....160.....-..170...-......180.....--..---190.---........200...-------...----.--210.........220....---.-...230.......240.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNDVLTLLRNHRSFRKYKKGVEIPEEKLDAIIRAAQAAPSWINGQHYSIIAIKDQERKNKMAELC-G-NQPYIAECS-VFLCF----------VADFH----------------R-V-KVA---SD---M---H-----G------------------------K-------------S-------------F--Q----------------IA---G------E------EDL--LMVAATDIGLCMQNALTAAESLDYGTICIGGL-RRNITATAGFLNL-PE-F-VMPVVGLCIGVPD-VEA--PVK-PRLPKEAVYFEETY--QT---D--V---MPLLEAYDQEIIPF-------SER----E--G--FVSYTERLAK-FYDRP---Y-YPNLTEQIKERGFLGGK
36 HHSearch 93.4440%-122 - C3 -1ZCH NFRA2_BACSU A:[1-249] MNEVIKSLTDHRSIRSYTD-EPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELA-G-GQPWIDQAP-VFLLF----------CADFN----------------R-A-KIA---LE---DL--H-----D------------------------F-------------K-------------M--E----------------IT---N------G------LES--VLVGAVDAGIALGTATAAAESLGLGTVPIGAV-RGNPQELIELLEL-PK-Y-VFPLSGLVIGHPA-DRS--AKK-PRLPQEAVNHQETY--LN---QDEL---TSHIQAYDEQMSEY-------MNK----RTNGKETRNWSQSIAS-YYERL---Y-YPHIREMLEKQGFKVEK
1 PsiBlast_PDB 93.0739%-127 - C3 -1ZCH NFRA2_BACSU A:[1-245] MNEVIKSLTDHRSIRSYTDE-PVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKISELA-G-GQPWIDQAP-VFLLF----------CADFN----------------R-A-KIAL--ED---L---H-----D------------------------F-------------K-------------M--E----------------IT---N------G------LES--VLVGAVDAGIALGTATAAAESLGLGTVPIGAV-RGNPQELIELLEL-PK-Y-VFPLSGLVIGHPA-DRS--AKK-PRLPQEAVNHQETYLNQD---E--L---TSHIQAYDEQMSEY-------MNKRTNGK--E--TRNWSQSIAS-YYERL---Y-YPHIREMLEKQGF----
57 Fugue 86.1131%-125 - C3 -1BKJ FRP_VIBHA A:[2-240] -NNTIETILAHRSIRKFTA-VPITDEQRQTIIQAGLAASSSSMLQVVSIVRVTDSEKRNELAQFA-G-NQAYVESAA-EFLVF----------CIDYQ----------------R-H-ATI---NP---------------------------------------------------------------------------------------------------DVQADFTEL--TLIGAVDSGIMAQNCLLAAESMGLGGVYIGGL-RNSAAQVDELLG-LPE-N-SAVLFGMCLGHPDQ-NP--EVK-PRLPAHVVVHENQY--QE---L--N---LDDIQSYDQTMQAY-------YS-------------TWSQEVTG-KLAGE---S-RPHILPYLNSKGLAKR-
37 HHSearch 86.0631%-124 * C3 *1F5V NFSA_ECOLI A:[1-239] MTPTIELICGHRSIRHFTD-EPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLT-G-GQKHVAQAA-EFWVF----------CADFN----------------R-H-LQI---CP---D---A-----Q-------------------------------------------------------------------------L---G------L------AEQ--LLLGVVDTAMMAQNALIAAESLGLGGVYIGGL-RNNIEAVTKLLKL-PQ-H-VLPLFGLCLGWPA-DNP--DLK-PRLPASILVHENSY--QP---L--D---KGALAQYDEQLAEY-------YLT----RGSNNRRDTWSDHIRR-TIIKE---S-RPFILDYLHKQGWAT--
2 PsiBlast_PDB 85.0231%-126 - C3 -3N2S NFRA1_BACSU A:[2-246] -NNTIETILNHRSIRSFTDQL-LTAEEIDTLVKSAQAASTSSYVQAYSIIGVSDPEKKRELSVLA-G-NQPYVEKNG-HFFVF----------CADLY----------------R-H-QQL---AE---E---K-----G------------------------E-------------H-------------IS-E----------------LL---E------N------TEM--FMVSLIDAALAAQNMSIAAESMGLGICYIGGI-RNELDKVTEVLQT-PD-H-VLPLFGLAVGHPA-NLS--GKK-PRLPKQAVYHENTY--NVNTDD--F---RHTMNTYDKTISDYYRERTN-GKR----E--E----TWSDQILN-FMKQK---P-RTYLNDYVKEKGF----
23 PsiBlast_CBE 84.1932%-134 - C3 -1F5V NFSA_ECOLI B:[1-227] MTPTIELICGHRSIRHFTDE-PISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLT-G-GQKHVAQAA-EFWVF----------CADFN----------------RHL-QIC---PD---A---Q-------------------------------------------------------------------------------L---G------L------AEQ--LLLGVVDTAMMAQNALIAAESLGLGGVYIGGL-RNNIEAVTKLLKL-PQ-H-VLPLFGLCLGWPA-DNP--DLK-PRLPASILVHENSY--QP---L--D---KGALAQYDEQLAEYYLTRGSNNRR----D--T--WSDHIRRTII-KESRP---F------------------
5 PsiBlast_PDB 83.8832%-133 - C3 -1F5V NFSA_ECOLI A:[1-227] MTPTIELICGHRSIRHFTDE-PISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLT-G-GQKHVAQAA-EFWVF----------CADFN----------------RHL-QIC---PD---A---Q-------------------------------------------------------------------------------L---G------L------AEQ--LLLGVVDTAMMAQNALIAAESLGLGGVYIGGL-RNNIEAVTKLLKL-PQ-H-VLPLFGLCLGWPA-DNP--DLK-PRLPASILVHENSY--QP---L--D---KGALAQYDEQLAEYYLTRGSNNRR----D--T--WSDHIRRTII-KESRP---F------------------
3 PsiBlast_PDB 83.5035%-145 - C3 -1BKJ FRP_VIBHA A:[2-205] -NNTIETILAHRSIRKFT-AVPITDEQRQTIIQAGLAASSSSMLQVVSIVRVTDSEKRNELAQFA-G-NQAYVESAA-EFLVF----------CIDYQ----------------RHA-TIN---PD---V---Q-------------------------------------------------------------------------------A---D------F------TEL--TLIGAVDSGIMAQNCLLAAESMGLGGVYIGGL-RNSAAQVDELLGL-PE-N-SAVLFGMCLGHPD-QNP--EVK-PRLPAHVVVHENQY--QE---L--N---LDDIQSYDQTM-------------------------------------------------------------
4 PsiBlast_PDB 81.9735%-144 - C3 -2BKJ FRP_VIBHA A:[2-205] -NNTIETILAHRSIRKFT-AVPITDEQRQTIIQAGLAASSSSMLQVVSIVRVTDSEKRNELAQFA-G-NQAYVESAA-EFLVF----------CIDYQ----------------RHA-TIN---PD---V---Q-------------------------------------------------------------------------------A---D------F------TEL--TLIGAVDSGIMAQNCLLAAESMGLGGVYIGGL-RNSAAQVDELLGL-PE-N-SAVLFGMCLGHPD-QNP--EVK-PRLPAHVVVHENQY--QE---L--N---LDDIQSYDQTM-------------------------------------------------------------
22 PsiBlast_CBE 81.0635%-141 - C3 -1BKJ FRP_VIBHA B:[2-205] -NNTIETILAHRSIRKFT-AVPITDEQRQTIIQAGLAASSSSMLQVVSIVRVTDSEKRNELAQFA-G-NQAYVESAA-EFLVF----------CIDYQ----------------RHA-TIN---PD---V---Q-------------------------------------------------------------------------------A---D------F------TEL--TLIGAVDSGIMAQNCLLAAESMGLGGVYIGGL-RNSAAQVDELLGL-PE-N-SAVLFGMCLGHPD-QNP--EVK-PRLPAHVVVHENQY--QE---L--N---LDDIQSYDQTM-------------------------------------------------------------
21 PsiBlast_CBE 80.4835%-140 - C3 -2BKJ FRP_VIBHA B:[2-205] -NNTIETILAHRSIRKFT-AVPITDEQRQTIIQAGLAASSSSMLQVVSIVRVTDSEKRNELAQFA-G-NQAYVESAA-EFLVF----------CIDYQ----------------RHA-TIN---PD---V---Q-------------------------------------------------------------------------------A---D------F------TEL--TLIGAVDSGIMAQNCLLAAESMGLGGVYIGGL-RNSAAQVDELLGL-PE-N-SAVLFGMCLGHPD-QNP--EVK-PRLPAHVVVHENQY--QE---L--N---LDDIQSYDQTM-------------------------------------------------------------
9 PsiBlast_PDB 77.8524%-141 - C3 -3GBH ? A:[8-209] INDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVQSDEMKEKVKESF-GFNSRQLTTSS-AMLII----------FGDLQ----------------N-Y-EKA---EQ---I---Y-----GDAVEQQLMTEDIKAQLLDWILPYYK-------------N-------------L--S----------------RE---G------M------KDI--VNI---DSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGYDS---D-R-YVPVLAIAIGKKA-QDA--HDS-VRLPIDDV--------------------------------------------------------------------------------------------
38 HHSearch 77.5525%-114 - C3 -3EOF ? A:[1-247] --GMMDTVKNRRTIRKYQQ-KDITPDLLNDLLETSFRASTMGGMQLYSVVVTRDAEKKEILSPAH-F-NQPMVKEAP-VVLTF----------CADFR----------------R-F-CKY---CQ---E---R-----N------------------------A-------------V-------------P-------------------GY---G------N------LMS--FLNAAMDTLLVAQTFCTLAEEAGLGICYLGTT-TYNPQMIIDALHL-PE-L-VFPITTVTVGYPA-ESP--KQV-DRLPIEGIIHEESY--HD---Y--TAEDINRLYAYKESLPEN-------KLF----IEENQ-KETLPQVFTDVRYTKKDNEFMSENLLKVLRRQGFM---
48 HHSearch 76.8826%-145 - C3 -3GBH ? A:[9-212] -NDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVQSDEMKEKVKESFGF-NSRQLTTSS-AMLII----------FGDLQ----------------N-Y-EKA---EQ---I---Y-----G------------------------DAVEQQLMTEDIKAQ-------------LLDW----------------IL---PYYKNLSR------EGM--KDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGF---DKENIADIIGY-DSDR-YVPVLAIAIGKKA-QDA--HDS-VRLPIDDVREF-----------------------------------------------------------------------------------------
45 HHSearch 76.5927%-137 - C3 -1NOX NOX_THET8 A:[8-204] -LDAKTAALKRRSIRRYRK-DPVPEGLLREILEAALRAPSAWNLQPWRIVVVRDPATKRALREAA-F-GQAHVEEAP-VVLVL----------YADLE----------------D-A-LAH---LD---EVIHP-----G------------------------V-------------QGERREAQKQAIQRAF-A----------------AM---G------Q------EAR--KAWASGQSYILLGYLLLLLEAYGLGSVPMLGF---DPERVRAILGL-PS-R-AAIPALVALGYPA-EEG--YPS-HRLPLERVVLW-----------------------------------------------------------------------------------------
6 PsiBlast_PDB 73.5430%-137 - C3 -3EOF ? A:[6-184] -------VKNRRTIRKYQQK-DITPDLLNDLLETSFRASTMGGMQLYSVVVTRDAEKKEILSPAH-F-NQPMVKEAP-VVLTF----------CADFR----------------R-FCKYC---QE---R---N-----A------------------------------------------------------------------------VP---G------Y------GNLMSFLNAAMDTLLVAQTFCTLAEEAGLGICYLGTT-TYNPQMIIDALHL-PE-L-VFPITTVTVGYP--AES--PKQVDRLPIEGIIHEESY--H-----------------------------------------------------------------------------------
54 HHSearch 73.0625%-145 - C3 -3GE6 ? A:[8-211] -TDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLAPLAKF-NQVQVETSS-AVIAV----------FGDMK----------------A-I-DQLENIYDTAVE---K-----G------------------------LMPQEVRDRQV---P-------------AIQG----------------MY---E------NVPA---SAL--KDSILIDSGLVSMQLMLVARAHGYDTNPIGGY---EKDQIAEAFGM-EK-DRYVPVMLLSIGKAV-DAG--YPS-VRLPINDIADW-----------------------------------------------------------------------------------------
53 HHSearch 71.0521%-138 - C3 -3BEM MHQN_BACSU A:[13-217] MAEFTHLVNERRSASNFLSGHPITKEDLNEMFELVALAPSAFNLQHTKYVTVLDQDVKEKLKQAA-N-GQYKVVSSS-AVLLV----------LGDKQ----------------A-Y-QQA---AD---I---Y-----EG-----------------------L-------------K-------------VL-GILNKQEYDHMVQDTVSFY---E------NRGE---QFK--RDEAIRNASLSAMMFMLSAAAAGWDTCPMIGF---DAEAVKRILNI-DD-Q-FEVVMMITIGKEK-TESRRPRG-YRKPVNEFVEY-----------------------------------------------------------------------------------------
47 HHSearch 70.9520%-141 - C3 -3GAG ? A:[3-205] MNDYLNFLDGRVSVRRFDPDAVLPNDLIKDMLEHASYAPSGNNFQPWRVVVVKNKNKQEDLKKLA-A-LQPQVATAS-AVFLL----------FGDEN----------------A-Y-DLT---WW---Q---EFHVQKG------------------------IITKDEAAARA---E-------------RI-RQ---------------YFDLHP------E------DKE--TQGLRLDVGLFAMNLMQVVRVYGYDSVPMRGV---DFDAIKTYLDM-PN-G-WEPILMLPVGKAL-QAG--NPH-VRKSVAEFAEII----------------------------------------------------------------------------------------
11 PsiBlast_PDB 70.6721%-161 - C3 -3GAG ? A:[4-184] -NDYLNFLDGRVSVRRFDPDAVLPNDLIKDMLEHASYAPSGNNFQPWRVVVVKNKNKQEDLKKLA-A-LQPQVATASAVFLLFGDENAYDLTWWQEFHVQKGIITKDEAAARAER-I-RQY---FD---L---H-----P------------------------E-------------D-------------K--E----------------TQ---G---------------------LRLDVGLFAMNLMQVVRVYGYDSVPMRGV---DFDAIKTYLDM-PN-G-WEPILMLPVG-----------------------------------------------------------------------------------------------------------------