@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2131: (2016-04-01 )
MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKTRIPSNMILLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQIAGLNDYFMAEANLYTARVIETITAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLIEKCNLMRGNGENRLKESLEQLGRYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHLCRKLVEAGFLAENSKSFVLLDKYGKIEPEVTTI

Atome Classification :

(20 SA) --.........10........20........30......-..40........50........60....-----..-----.-----.--70-----.........80.......-.-90-.--..-......-100.-......110-......-----..-----.120.......130.......140-.-..-....150.-......160......-.--.170...-....180.......190........200.......210.......220.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --MQSVFEDLYSKKILEEEFGYTCFLQTLIDNRIPYKKT-RIPSNMILLTEDTINTKVYFIEKGIVSL-----EK-----N-----K--N------VISFLGSNQIAGLNDYFM-A-E--A--NL-YTARVI-ETIT-AYEFDKE---DIICSI-----IG-----MQEGWLYLYLNNRNHENVLIEKCN-L-MR-GNGENRLK-ESLEQLGR-YFGNEK-E--GVLRIPK-CFTKKIIANYSNLSV-RSVTHLCRKLVEAGFLAENSKSFVLLDKYGKIEPEVTTI
8 PsiBlast_PDB 78.6819% -88 - C6 -4CYD ? A:[18-216] ---------------------------TAVNNLIQDMETVRFPRGATIFDEGEPGDRLYIITSGKVKL-----AR-----HAPDGRE--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSAVCV-TEVH-AATMNSDMLRNWVADH-----PA-----IAEQLLRVLARRLRRTNASL--AD-L-IF-TDVPGRVA-KTLLQLAN-RFGTQE-A---ALRVNH-DLTQEEIAQLVGASR-ETVNKALATFAHRGWIRLEGKSVLIVD------------
4 PsiBlast_PDB 76.6619% -80 - C6 -4BYY CRPL_CORGL A:[20-218] ---------------------------TAVNNLIQDMETVRFPRGATIFDEGEPGDRLYIITSGKVKL-----AR-----HAPDGRE--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSAVCV-TEVH-AATMNSDMLRNWVADH-----PA-----IAEQLLRVLARRLRRTNASL--AD-L-IF-TDVPGRVA-KTLLQLAN-RFGTQE-A--GALRVNH-DLTQEEIAQLVGASR-ETVNKALATFAHRGWIRLEGKSVLIVD------------
9 PsiBlast_PDB 76.4719% -84 - C6 -3R6S CRPL_CORGL A:[40-238] ---------------------------TAVNNLIQDMETVRFPRGATIFDEGEPGDRLYIITSGKVKL-----AR-----HAPDGRE--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSAVCV-TEVH-AATMNSDMLRNWVADH-----PA-----IAEQLLRVLARRLRRTNASL--AD-L-IF-TDVPGRVA-KTLLQLAN-RFGTQE-A--GALRVNH-DLTQEEIAQLVGASR-ETVNKALATFAHRGWIRLEGKSVLIVD------------
22 HHSearch 74.4617% -74 - C6 -3LA7 NTCA_NOSS1 A:[32-234] ------------------------VFRQMATGAFPPVVE-TFERNKTIFFPGDPAERVYFLLKGAVKL-----SR-----VYEA--GEEI------TVALLRENSVFGVLSLLT-G-NKSD--RF-YHAVAF-TPVE-LLSAPIE---QVEQAL-----KE-----NPELSMLMLRGLSSRILQTEMMIETL-AH-RDMGSRLV-SFLLILCR-DFGVPC-A--DGITIDL-KLSHQAIAEAIGSTR-VTVTRLLGDLREKKMISIHKKKITVHK------------
3 PsiBlast_PDB 74.2520% -84 - C6 -3H3U CRPL_MYCTU A:[32-215] ------------------------------------------PRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-----R-----E--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSATTI-TEVR-AVSMDRD---ALRSWIADRPEIS-----EQLLRVLARRLRRTNNNL----AD-L-IF-TDVPGRVA-KQLLQLAQ-RFGTQE-G--GALRVTH-DLTQEEIAQLVGASR-ETVNKALADFAHRGWIRLEGKSVLISD------------
7 PsiBlast_PDB 73.8720% -84 - C6 -4A2U ? A:[35-218] ------------------------------------------PRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-----R-----E--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSATTI-TEVR-AVSMDRD---ALRSWIADRPEIS-----EQLLRVLARRLRRTNNNL----AD-L-IF-TDVPGRVA-KQLLQLAQ-RFGTQE-G--GALRVTH-DLTQEEIAQLVGASR-ETVNKALADFAHRGWIRLEGKSVLISD------------
6 PsiBlast_PDB 73.5420% -83 - C6 -3D0S CRPL_MYCTU A:[35-218] ------------------------------------------PRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-----R-----E--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSATTI-TEVR-AVSMDRD---ALRSWIADRPEIS-----EQLLRVLARRLRRTNNNL----AD-L-IF-TDVPGRVA-KQLLQLAQ-RFGTQE-G--GALRVTH-DLTQEEIAQLVGASR-ETVNKALADFAHRGWIRLEGKSVLISD------------
21 HHSearch 73.4917% -86 - C6 -2GAU - ? A:[29-225] -------------------------------LDKEIQPF-PCKKASTVFSEGDIPNNLFYLYEGKIKI-----LR------------RFH------ISRIVKPGQFFGMRPYFA-E-E--T--CS-STAIAV-ENSK-VLAIPVE---AIEALL-----KG-----NTSFCRYFLKALAKELGYAERRTVTL-TQ-KHVRGRLA-ETLLILKE-NFGFEN----DGATLSI-YLSREELATLSNMTV-SNAIRTLSTFVSERMLALDGKRIKIIDCDRL--------
5 PsiBlast_PDB 73.2820% -91 - C6 -3MZH CRPL_MYCTU A:[33-216] ------------------------------------------PRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-----R-----E--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSATTI-TEVR-AVSMDRD---ALRSWIADRPEIS-----EQLLRVLARRLRRTNNNL----AD-L-IF-TDVPGRVA-KQLLQLAQ-RFGTQE-G--GALRVTH-DLTQEEIAQLVGASR-ETVNKALADFAHRGWIRLEGKSVLISD------------
1 PsiBlast_PDB 72.8820% -81 - C6 -3I54 CRPL_MYCTU A:[57-240] ------------------------------------------PRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-----R-----E--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSATTI-TEVR-AVSMDRD---ALRSWIADRPEIS-----EQLLRVLARRLRRTNNNL----AD-L-IF-TDVPGRVA-KQLLQLAQ-RFGTQE-G--GALRVTH-DLTQEEIAQLVGASR-ETVNKALADFAHRGWIRLEGKSVLISD------------
2 PsiBlast_PDB 71.4520% -93 - C6 -3I59 CRPL_MYCTU B:[57-240] ------------------------------------------PRGHTVFAEGEPGDRLYIIISGKVKIGRRAPDG-----R-----E--N------LLTIMGPSDMFGELSIFD-P-G--P--RT-SSATTI-TEVR-AVSMDRD---ALRSWIADRPEIS-----EQLLRVLARRLRRTNNNL----AD-L-----DVPGRVA-KQLLQLAQ-RFGT--------LRVTH-DLTQEEIAQLVGASR-ETVNKALADFAHRGWIRLEGKSVLISD------------
40 Fugue 66.3416% -70 - C6 -1O3T CRP_ECOLI A:[2-200] ----PTLEWFLSH----------------------CHIH-KYPSKSTLIHQGEKAETLYYIVKGSVAV-----LIKDEEGK-----E--M------ILSYLNQGDFIGELGLFE-E-G--Q--ERSAWVRAK-TACE-VAEISYK---KFRQLI-----QV-----NPDILMRLSAQMARRLQVTSEKVG-N-LAFLDVTGRIA-QTLLNLAK-QPDAMT-H--PDGMQIK--ITRQEIGQIVGCSR-ETVGRILKMLEDQNLISAHGKTIVVYG------------
24 HHSearch 63.6114% -85 - C6 -2BGC PRFA_LISMO A:[18-214] -----------------------------------IKPK-QFHKKELIFNQWDPQEYCIFLYDGITKL-----TS-----ISEN--GTIM------NLQYY-KGAFVIMSGFID-T-E--TSVGY-YNLEVISEQAT-AYVIKIN---ELKELL-----SK-----NLTHFFYVFQTLQKQVSYSLAKFNDF-SI-NGKLGSIC-SQLLILTY-VYGKET-P--DGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYL--------
38 Fugue 61.3514% -79 - C6 -4RFA - ? A:[10-225] EKLDTVLGYLKEFPDYYKY----------------VTKK-TYTLNEKIIFEDEKAKSIFFIVEGYAAV-----EL-----E-----D--NLRKTNYISIFVLPYNVLGIDAF-----S--S--YP-KHSITVMSESLMLYKID-A---DFLLNI-----LS-----IKPDVNDFLLTSIADVFARHYALL-GMIA-KTPKERIYMALENLAVEMGTEDEE-R--NEIVLPN-FINQSVLARYCRTTQ-PNISNLLTELVEEEFLINKKSPYRIDKDSLD--------
20 HHSearch 60.8615% -65 - C6 -3IWZ - CLP_XANCP A:[30-228] -------------------------------FLAHSHRR-RYPTRTDVFRPGDPAGTLYYVISGSVSI-----IA-----EEDD--DREL------VLGYFGSGEFVGEMGLFI-ESD--T--RE-VILRTR-TQCE-LAEISYE---RLQQLF-----QTSLSPDAPRILYAIGVQLSKRLLDTTRKASRL-AF-LDVTDRIV-RTLHDLSK-EPEAMS----HPQGTQL-RVSRQELARLVGCSR-EMAGRVLKKLQADGLLHARGKTVVLYG------------
17 HHSearch 60.4816% -77 - C6 -2OZ6 VFR_PSEAE A:[9-205] -------------------------------LLAHCHRR-RYTAKSTIIYAGDRCETLFFIIKGSVTI-----LI-----EDDD--GREM------IIGYLNSGDFFGELGLFE----Q-E--RS-AWVRAK-VECE-VAEISYA---KFRELS-----QQ-----DSEILYTLGSQMADRLRKTTRKVGDL-AF-LDVTGRVA-RTLLDLCQ-QPDAMTHP--DG--MQI-KITRQEIGRIVGCSR-EMVGRVLKSLEEQGLVHVKGKTMVVFG------------
33 HHSearch 57.7016% -69 * C6 *3B02 - ? A:[2-184] --------------------------------------K-RFARKETIYLRGEEARTLYRLEEGLVRV-----VE-----LLPD--GRLI------TLRHVLPGDYFGEEALEG---K--A--YR-YTAEAM-TEAV-VQGLEPR---AM----------------DHEALHRVARNLARQMRRVQAYEAHL-QT-GELRARIA-RYLLFLAD-TPLSAR----DRQGIYV-TVSHEEIADATASIR-ESVSKVLADLRREGLIATAYRRVYLLDLAAL--------
27 HHSearch 56.8116% -74 - C6 -3KCC CRP_ECOLI A:[65-257] -------------------------------FLSHCHIH-KYPSKSTLIHQGEKAETLYYIVKGSVAV-----LI-----KDEE--GKEM------ILSYLNQGDFIGELGLFEEG-Q--E--RS-AWVRAK-TACE-VAEISYK---KFRQLI-----QV-----NPDILMRLSAQMARRLQVTSEKVGNL-AF-LLVTGRIA-QTLLNLAK-QPDAMT-H---PDGMQI-KITRQEIGQIVGCSR-ETVGRILKMLEDQNLISAHGKTIVVY-------------
15 PsiBlast_PDB 56.8030% -95 - C6 -4RFA - ? A:[153-221] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIY-MALENLAV-EMGTED-EERNEIVLPN-FINQSVLARYCRTTQ-PNISNLLTELVEEEFLI-NKKSPYRIDK-----------
19 HHSearch 54.9512% -70 - C6 -3E97 ? A:[25-220] -------------------------------ALKVVTER-NFQPDELVVEQDAEGEALHLVTTGVVRV-----SR-----VSL----RER------VLGDIYAPGVVGETAVLA-H-Q--E--RS-ASVRAL-TPVR-TLMLHRE---HFELIL-----RR-----HPRVLWNLAEMLARRVTFLNDELI-A-FG-QNTEAALT-HVFANLYR-QRLAAG----VPQPEVL-PLGTQDIMARTSSSR-ETVSRVLKRLEAHNILEVSPRSVTLLDLAAL--------