@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2174: (2016-04-01 )
LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVMDAGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETEEYDFMIPSGQVVKITISVGVSSSKDGANTSEGLFKSADEALYKAKLTGRNQVCIADGN

Atome Classification :

(20 SA) --------------------------------------------------------------------------------.........10........20........30........40........50-----........60........70........80........90........100.......110...--------....120.......130.......140.......150.......160.......170.......180.......190.......200.....----..210.....-..---220---.......230.......240.......250.......260.....-...270.......280.......290.......----300....-..-.310.......320-...--.....330---.......340.......350.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------------------------------------------------------------LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALM-----VFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGII--------TAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVR----QFDEKINHVM-DA---GSR---QVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNT-SDGSE-AFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETE----EYDFMIP-SG-QVVKITISVGVSS--SKD--GANTSEGL---FKSADEALYKAKLTGRNQVCIADGN
51 Fugue 90.3919%-116 - C6 -1W25 PLED_CAUCN A:[1-454] SARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAELGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRR----YMTGQLDSLV-KR---ATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAVVGKAAH
25 PsiBlast_CBE 86.6441% -73 - C6 -3BRE ? B:[174-336] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRR----HFDEYLEMEW-RR---SLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC-SRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRP-GS-H---LTVSIGVSTLVPGG--GGQTFRVL---IEMADQALYQAKNNGRNQVGL----
5 PsiBlast_PDB 86.4241% -75 - C6 -3BRE ? A:[174-336] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRR----HFDEYLEMEW-RR---SLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC-SRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRP-GS-H---LTVSIGVSTLVPGG--GGQTFRVL---IEMADQALYQAKNNGRNQVGL----
37 HHSearch 85.7737% -71 - C6 -3I5C GCN4_YEAST A:[20-196] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENEVARLKKLVNSDGLTGLSNRR----HFDEYLEMEW-RRSLREQS---QLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDL-AARYGGEEFAMVLPGTSPGGARLLAEKVRRTVE----SLQISHDQPR-PGSHLTVSIGVST--LVPGGGGQTFRVL---IEMADQALYQAKNNGRNQVGLM---
6 PsiBlast_PDB 85.4241% -69 - C6 -3I5C GCN4_YEAST A:[33-195] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRR----HFDEYLEMEW-RR---SLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC-SRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRP-GS-H---LTVSIGVSTLVPGG--GGQTFRVL---IEMADQALYQAKNNGRNQVGL----
24 PsiBlast_CBE 84.8541% -75 - C6 -3I5B ? B:[6-168] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRR----HFDEYLEMEW-RR---SLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC-SRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRP-GS-H---LTVSIGVSTLVPGG--GGQTFRVL---IEMADQALYQAKNNGRNQVGL----
4 PsiBlast_PDB 84.1941% -68 - C6 -3I5B ? A:[6-168] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRR----HFDEYLEMEW-RR---SLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC-SRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRP-GS-H---LTVSIGVSTLVPGG--GGQTFRVL---IEMADQALYQAKNNGRNQVGL----
2 PsiBlast_PDB 83.4138% -79 - C6 -2V0N PLED_CAUCN A:[291-448] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT--L---GGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAV------
34 HHSearch 83.2534% -79 - C6 -3TVK YDEH_ECOLI A:[4-164] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRR----VLDESFDHQL-RNA--EPL---NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYET-VYRYGGEEFIIIVKAANDEEACRAGVRICQLVD----NHAITH--SE-GHINITVTAGVSR--AFP---EEPLDVV---IGRADRAMYEGKQTGRNRCMFIDE-
26 PsiBlast_CBE 83.1041% -66 - C6 -3I5C GCN4_YEAST B:[33-195] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRR----HFDEYLEMEW-RR---SLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGC-SRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRP-GS-H---LTVSIGVSTLVPGG--GGQTFRVL---IEMADQALYQAKNNGRNQVGL----
10 PsiBlast_PDB 82.5635% -87 - C6 -3TVK YDEH_ECOLI A:[4-163] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRR----VLDESFDHQLRNA---EPL---NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYET-VYRYGGEEFIIIVKAANDEEACRAGVRICQLVD----NHAITHS-EG-H-INITVTAGVSR--------AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID--
32 HHSearch 82.4335% -75 - C6 -1W25 PLED_CAUCN A:[283-454] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSLELAVTDQLTGLHNRR----YMTGQLDSLV-KRATLGGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVAHGR-EMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAVVGKAAH
1 PsiBlast_PDB 81.9638% -80 - C6 -1W25 PLED_CAUCN A:[291-448] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT--L---GGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAV------
22 PsiBlast_CBE 81.8938% -76 - C6 -2V0N PLED_CAUCN B:[291-448] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT--L---GGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAV------
23 PsiBlast_CBE 81.4638% -81 - C6 -1W25 PLED_CAUCN B:[291-448] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT--L---GGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAV------
9 PsiBlast_PDB 81.1635% -85 - C6 -4H54 YDEH_ECOLI A:[129-288] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRR----VLDESFDHQLRNA---EPL---NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYET-VYRYGGEEFIIIVKAANDEEACRAGVRICQLVD----NHAITHS-EG-H-INITVTAGVSR--------AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID--
27 PsiBlast_CBE 81.1435% -85 - C6 -4H54 YDEH_ECOLI B:[129-288] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRR----VLDESFDHQLRNA---EPL---NLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWT-RDYET-VYRYGGEEFIIIVKAANDEEACRAGVRICQLVD----NHAITHS-EG-H-INITVTAGVSR--------AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID--
3 PsiBlast_PDB 81.0238% -76 - C6 -2WB4 PLED_CAUCN A:[292-449] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT--L---GGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAV------
33 HHSearch 80.7232% -78 * C6 *3IGN ? A:[5-170] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKLSMTDRLTGLLNRG----TWENLVDAEY-ERFRRYGQ---ATSLVMFDIDHFKPVNDTYGHLAGDEVIRHTADVTRNNI-RQSDS-AGRYGGEEFGIILPETDAESARVICERIREAIE----KSTVST--SA-GDIQYTVSMGIAQ--LTE--TPENYMQW---MQKADEALYKAKESGRNKVVVSL--
21 PsiBlast_CBE 79.9938% -75 - C6 -2WB4 PLED_CAUCN B:[292-449] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DQLTGLHNRRYMTGQLDSLVKRAT--L---GGD---PVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNV-RAIDL-PCRYGGEEFVVIMPDTALADALRIAERIRMHVS----GSPFTVA-HGREMLNVTISIGVSA--TAG--EGDTPEAL---LKRADEGVYQAKASGRNAV------