@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2390: (2016-04-03 )
LDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGGQLSTLYPEKYIYDIPGYPSVRAQELVNNLIQQMKPFDPTVALEEAVQSVEKQVDGTFEIITKKDTHYSKAIIITAGNGAFEPRRLDLPEAEQYEGTNIHYFINDLSRFSGRRVAVCGGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLGNGDKLTHITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKNWGLELERNSIVVNSKMETSIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE

Atome Classification :

(20 SA) .........10........20........30..-.......40----........50--........60.-.-......70........80........90...-...--.-.--100...---.-...110.-.......120.....-..-130.......140...-..-..---150........160.......170.......180.......190---..----.....-.----200...-.....210----....----.--.----.220.-......230.......240.......250......----.260.-..-..-..270.-......280.......290.......300.......310.......320.......330
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) LDEKTKIYDITIIGGGPVGLFAAFYAGMRN-AS-VKIIESLPQ----LGGQLSTLYP--EKYIYDIPGYP-S-VRAQELVNNLIQQMKPFDPTVALEEAVQSVE-KQV--D-G--TFEIIT---K-KDTHY-S-KAIIITAGNGAFEPR-RL-DLPEAEQYEGTNIHYF-IN-DL---S-RFSGRRVAVCGGGDSAVDWALMLEKVASSVAIVHRRNAFRA----HE----HSVNN-L----EK-SSI-AIKTPFIP----TEVL----G--N----GDKLT-HITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKN----WGLEL-ER-NS-IVVNSK-METSIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE
37 HHSearch 97.2871%-122 - C1 -3LZW FENR2_BACSU A:[3-329] --EDTKVYDITIIGGGPVGLFTAFYGGMRQ-AS-VKIIESLPQ----LGGQLSALYP--EKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVE-KQA--D-G--VFKLVT---N-EETHY-S-KTVIITAGNGAFKPR-KL-ELENAEQYEGKNLHYF-VD-DL---Q-KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA----HE----HSVEN-L----HA-SKV-NVLTPFVP----AELI----G--E-----DKIE-QLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKN----WGLDI-EK-NS-IVVKST-METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLF-
1 PsiBlast_PDB 97.0570%-121 - C1 -3LZW FENR2_BACSU A:[1-329] MREDTKVYDITIIGGGPVGLFTAFYGGMRQ-AS-VKIIESLPQ----LGGQLSALYP--EKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVE-KQA--D-G--VFKLVT---N-EETHY-S-KTVIITAGNGAFKPR-KL-ELENAEQYEGKNLHYF-VD-DL---Q-KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA----HE----HSVEN-L----HA-SKV-NVLTPFVP----AELI----G--E-----DKIE-QLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKN----WGLDI-EK-NS-IVVKST-METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLF-
21 PsiBlast_CBE 96.1970%-122 - C1 -3LZX FENR2_BACSU B:[1-329] MREDTKVYDITIIGGGPVGLFTAFYGGMRQ-AS-VKIIESLPQ----LGGQLSALYP--EKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVE-KQA--D-G--VFKLVT---N-EETHY-S-KTVIITAGNGAFKPR-KL-ELENAEQYEGKNLHYF-VD-DL---Q-KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA----HE----HSVEN-L----HA-SKV-NVLTPFVP----AELI----G--E-----DKIE-QLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKN----WGLDI-EK-NS-IVVKST-METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLF-
2 PsiBlast_PDB 95.8470%-121 - C1 -3LZX FENR2_BACSU A:[1-329] MREDTKVYDITIIGGGPVGLFTAFYGGMRQ-AS-VKIIESLPQ----LGGQLSALYP--EKYIYDVAGFP-K-IRAQELINNLKEQMAKFDQTICLEQAVESVE-KQA--D-G--VFKLVT---N-EETHY-S-KTVIITAGNGAFKPR-KL-ELENAEQYEGKNLHYF-VD-DL---Q-KFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA----HE----HSVEN-L----HA-SKV-NVLTPFVP----AELI----G--E-----DKIE-QLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKN----WGLDI-EK-NS-IVVKST-METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPKARVQPLHSTSLF-
3 PsiBlast_PDB 86.0543%-120 - C1 -2ZBW FENR_THET8 A:[7-328] --------DVLIVGAGPTGLFAGFYVGMRG-LS-FRFVDPLPE----PGGQLTALYP--EKYIYDVAGFP-K-VYAKDLVKGLVEQVAPFNPVYSLGERAETLE-REG--D----LFKVTT---S-QGNAY-TAKAVIIAAGVGAFEPR-RI-GAPGEREFEGRGVYYA-VK-SK---A-EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA----HE----ASVKE-LMKAHEE-GRL-EVLTPYEL----RRVE----G--D-----ERVR-WAVVFHNQTQEELALEVDAVLILAGYITKLGPLAN----WGLAL-EK-NK-IKVDTT-MATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSS----
4 PsiBlast_PDB 84.1444%-121 - C1 -3AB1 FENR_CHLTE A:[14-330] ------MRDLTIIGGGPTGIFAAFQCGMNN-IS-CRIIESMPQ----LGGQLAALYP--EKHIYDVAGFP-E-VPAIDLVESLWAQAERYNPDVVLNETVTKYT-KLD--D-G--TFETRT---N-TGNVYRS-RAVLIAAGLGAFEPR-KLPQLGNIDHLTGSSVYYA-VK-SV---E-DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG----HG----KTAHE-V----ER-ARANGTIDVYLE----TEVASIEES--N----G-VLT-RVHLRSSDG-SKWTVEADRLLILIGFKSNLGPLAR----WDLEL-YE-NA-LVVDSH-MKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPG-------------
22 PsiBlast_CBE 83.7344%-113 - C1 -3AB1 FENR_CHLTE B:[14-339] ------MRDLTIIGGGPTGIFAAFQCGMNN-IS-CRIIESMPQ----LGGQLAALYP--EKHIYDVAGFP-E-VPAIDLVESLWAQAERYNPDVVLNETVTKYT-KLD--D-G--TFETRT---N-TGNVYRS-RAVLIAAGLGAFEPR-KLPQLGNIDHLTGSSVYYA-VK-SV---E-DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG----HG----KTAHE-V----ER-ARANGTIDVYLE----TEVASIEES--N----G-VLT-RVHLRSSDG-SKWTVEADRLLILIGFKSNLGPLAR----WDLEL-YE-NA-LVVDSH-MKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPGEKIRNVFSS----
38 HHSearch 82.3543%-108 - C1 -2ZBW FENR_THET8 A:[3-328] ----ADHTDVLIVGAGPTGLFAGFYVGMRG-LS-FRFVDPLPE----PGGQLTALYP--EKYIYDVAGFP-K-VYAKDLVKGLVEQVAPFNPVYSLGERAETLE-REG----D--LFKVTT---SQGNAYT-A-KAVIIAAGVGAFEPR-RI-GAPGEREFEGRGVYYA-VK-SK---A-EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA----HEASVKELMKA-H----EE-GRL-EVLTPYEL----RRVE----G--D----ERVRW-AVVFHNQTQE-ELALEVDAVLILAGYITKLGPLAN----WGLAL-EK-NK-IKVDTT-MATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSS----
39 HHSearch 81.8942%-118 - C1 -3AB1 FENR_CHLTE A:[13-330] -----DMRDLTIIGGGPTGIFAAFQCGMNN-IS-CRIIESMPQ----LGGQLAALYP--EKHIYDVAGFP-E-VPAIDLVESLWAQAERYNPDVVLNETVTKYT-KLD--D-G--TFETRT---NTGNVYR-S-RAVLIAAGLGAFEPRKLP-QLGNIDHLTGSSVYYA-VK-SV---E-DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAH----EVERA-R----AN-GTI-DVYLETEV----ASIE----E--S----NGVLT-RVHLRSSDGS-KWTVEADRLLILIGFKSNLGPLAR----WDLEL-YE-NA-LVVDSH-MKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPG-------------
15 PsiBlast_PDB 74.2330%-104 - C1 -4GCM TRXB_STAAW A:[7-306] -------FDIAIIGAGPAGMTAAVYASRANLKT-VMIERGIP------GGQMANT-----EEVENFPGFE-M-ITGPDLSTKMFEHAKKFGAVYQYGD-IKSVE-DK-----G--EYKVIN---F-GNKEL-TAKAVIIATGA---EYK-KI-GVPGEQELGGRGVSYCAVC-DG---A-FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA----QR----ILQDR-A----FK-ND----KIDFIW----SHTL----K--SINEKDGKVG-SVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKD----LGITN-DV-GY-IVTKDD-MTTSVPGIFAAGDV--RDKGLRQIVTATGDGSIAAQSAAEYIE---------------
42 HHSearch 72.9626%-115 * C1 *3R9U ? A:[1-314] ---SNAMLDVAIIGGGPAGLSAGLYATRGG-LKNVVMFEKGM-----PGGQITSSS-----EIENYPGVA-QVMDGISFMAPWSEQCMRFGLKH-EMVGVEQIL-KNS--D-G--SFTIKL---EGGKTEL-A-KAVIVCTGS---APK-KA-GFKGEDEFFGKGVSTC-AT-CD---GFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA----AP----STVEKVK----KN-EKI-ELITSASV----DEVY----G--D----KMGVA-GVKVKL-KDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNM-EEGGQ-VSVDLK-MQTSVAGLFAAGDLRKDA--PKQVICAAGDGAVAALSAMAYIESL-------------
16 PsiBlast_PDB 72.4328%-109 - C1 -3CTY ? A:[14-307] ----ERDFDVVIVGAGAAGFSAAVYAARSG-FS-VAILD--KA----VAGGLTAEAPLVENYL----GFK-S-IVGSELAKLFADHAANY---AKIREGVEVRSIKKT--Q-G--GFDIET---N-DDTYH-A-KYVIITTGT---THK-HL-GVKGESEYFGKGTSYC-STCDG---Y-LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC----EN----AYVQE-I----KK-RNI-----PYIMNAQVTEIV----G--D----GKKVT-GVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKD----SGVKLDER-GY-IVVDSR-QRTSVPGVYAAGDVTS--GNFAQIASAVGDGCKA------------------------
43 HHSearch 72.1925%-110 - C1 -3ITJ TRXB1_YEAST A:[21-336] -----VHNKVTIIGSGPAAHTAAIYLARAE-IK-PILYEGMMANGIAAGGQLTTTT-----EIENFPGFPDG-LTGSELMDRMREQSTKFGTEI-ITETVSKVD-LSS----K--PFKLWTEFNEDAEPVT-T-DAIILATGA---SAK-RM-HLPGEETYWQKGISAC-AV-CDGAVP-IFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA----ST----IMQKR-AE---KN-EKI-EILYNTVA----LEAK----G--D----GKLLN-ALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-----QVDT-DEAGY-IKTVPGSSLTSVPGFFAAGDVQDSKY--RQAITSAGSGCMAALDAEKYLTS--------------
47 HHSearch 71.9327%-107 - C1 -3CTY ? A:[14-316] ----ERDFDVVIVGAGAAGFSAAVYAARSG-FS-VAILDKAVA-----GGLTAE-AP--L--VENYLGFK-S-IVGSELAKLFADHAAN-YAKIREGVEVRSIK-KTQ----G--GFDIET---N-DDTYH-A-KYVIITTGT---THK-HL-GVKGESEYFGKGTSYC-ST-CDG--Y-LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC----EN----AYVQE-I----KK-RNI-PYIMNAQV----TEIV----G--D----GKKVT-GVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKD----SGVKL-DERGY-IVVDSR-QRTSVPGVYAAGDVTSGN--FAQIASAVGDGCKAALSLYSDSI---------------
41 HHSearch 71.7924%-118 - C1 -1FL2 AHPF_ECOLI A:[1-308] ------AYDVLIVGSGPAGAAAAIYSARKG-IR-TGLMGE--R----FGGQILDTVD-----IENYISVP-K-TEGQKLAGALKVHVDEYDVDVIDSQSASKLI-PAAVEG-G--LHQIET---ASGAVLK-A-RSIIVATGA---KWR-NM-NVPGEDQYRTKGVTYC-PH-CDG--P-LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA----DQ----VLQDK-L----RSLKNV-DIILNAQT----TEVK----G--D----GSKVV-GLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEG-----AVER-NRMGE-IIIDAK-CETNVKGVFAAGDCTTVPYK--QIIIATGEGAKASLSAFDYLIRTK------------
40 HHSearch 71.0625%-117 - C1 -3F8D ? A:[12-319] ---PGEKFDVIIVGLGPAAYGAALYSARYM-LK-TLVIGET------PGGQLTEAG-----IVDDYLGLI-E-IQASDMIKVFNKHIEKYEVPVLL-DIVEKIE-NR--------EFVVKT---KRKGEFK-A-DSVILGIGV---KRR-KL-GVPGEQEFAGRGISYC-SV-ADA--P-LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----QP----IYVETVK----KK-PNV-EFVLNSVV----KEIK----G--D----K-VVK-QVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKS----NGIET-DTNGY-IKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-------------
49 HHSearch 71.0028%-107 - C1 -2Q7V ? A:[5-312] ---TAHDYDVVIIGGGPAGLTAAIYTGRAQ-LS-TLILEKGM-----PGGQIAWSE----E-VENFPGFP-EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQ-HDA--TSHPYPFTVRG---Y-NGEYR-A-KAVILATGA---DPR-KL-GIPGEDNFWGKGVSTC-AT-CDG--F-FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA----NKV---AQARA-F----AN-PKM-KFIWDTAV----EEIQ----G--A----D-SVS-GVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKD-----TVSL-RDDGY-VDVRDE-IYTNIPMLFAAGDVSDYIYR--QLATSVGAGTRAAMMTERQLA---------------
8 PsiBlast_PDB 70.9526%-106 - C1 -3F8R ? A:[16-319] -------FDVIIVGLGPAAYGAALYSARYM-LK-TLVIGETP------GGQLTE-----AGIVDDYLGLI-E-IQASDMIKVFNKHIEKYEVPVLLD-IVEKIE-NR--------EFVVKT---K-RKGEF---KADSVILGIGV-KRR-KL-GVPGEQEFAGRGISYCSVC-DA---P-LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----QP----IYVET-V----KK-KP----NVEFVL----NSVV----KEIK----GDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKS----NGIET-DT-NGYIKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-------------
6 PsiBlast_PDB 70.6126%-103 - C1 -3F8D ? A:[16-319] -------FDVIIVGLGPAAYGAALYSARYM-LK-TLVIGETP------GGQLTE-----AGIVDDYLGLI-E-IQASDMIKVFNKHIEKYEVPVLLD-IVEKIE-NR--------EFVVKT---K-RKGEF---KADSVILGIGV-KRR-KL-GVPGEQEFAGRGISYCSVA-DA---P-LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----QP----IYVET-V----KK-KP----NVEFVL----NSVV----KEIK----GDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKS----NGIET-DT-NGYIKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-------------
7 PsiBlast_PDB 70.5326%-103 - C1 -3F8P ? A:[16-319] -------FDVIIVGLGPAAYGAALYSARYM-LK-TLVIGETP------GGQLTE-----AGIVDDYLGLI-E-IQASDMIKVFNKHIEKYEVPVLLD-IVEKIE-N---------EFVVKT---K-RKGEF---KADSVILGIGV-KRR-KL-GVPGEQEFAGRGISYCSVC-DA---P-LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----QP----IYVET-V----KK-KP----NVEFVL----NSVV----KEIK----GDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKS----NGIET-DT-NGYIKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-------------