@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2421: (2016-04-03 )
LKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSISIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMRQRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQARNDLITNVSHDLRTPLTSILGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLFSYTRLDSVDYQLKKDELDIVELLRQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQIMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYKVDKNRTTTGTGLGLAIAKSIVEKHGGIVTAESKKRQTSFIVKLPLI

Atome Classification :

(21 SA) --------.........10........20........30........40........50........60........70........80........90........100----.........110.......120.......130.......140.......150.......160.......170......-.180.......190........200.......210.......220.......230.......240-........-----250--.........260...-.-...270--.......280.......290.---...---...300.--......310.......320.......330....--...340.........350.......360...-.-.-.-.-370.-.......380
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------LKSKLELLFTKISHVMNVWQATFFAAVSWVLALITIQTIYLWSISIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRL------MRQRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQARNDLITNVSHDLRTPLTSI-LGYLSYIHEDRYR-DEIELRYYTELVYGKARHLHKLIDDLFSYTRLDSVDYQLKKDELDIVELL--RQLVAEYD-----G----RAAERNMQIVEHFDA-N-KLIIGG--DGNQIMRLFENLFSNALRYGE---GNK---QIDVSAK--KEDNMAVVRVTNYGEEIPNVDLPYLFERFYKVD--KNRT--TTGTGLGLAIAKSIVEKHGGIVTAE-S-K-K-R-Q-TS-FIVKLPLI-
5 PsiBlast_PDB 91.2530% -93 - C2 -4JAU ? A:[7-246] ----------------------------------------------------------------------------------------------------------------------------------------------------------------SKELERLKRIDRMKTEFIANISHELRTPLTVI-KGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLV--ESAVNAIK-----E----FASSHNVNVL--FES-NVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDK---YVKVILD--EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD--S---------GLGLAITKEIVELHGGRIWVE-S-EVG-K-G-SR-FFVWIP---
7 PsiBlast_PDB 90.9529% -79 - C2 -4JAV ? A:[3-246] ----------------------------------------------------------------------------------------------------------------------------------------------------------NVTE--SKELERLKRIDRMKTEFIANISHELRTPLTAI-KAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLV--ESAVNAIK-----E----FASSHNVNVL--FES-NVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDK---YVKVILD--EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD--SSLTYEVPGTGLGLAITKEIVELHGGRIWVE-S-EVG-K-G-SR-FFVWIP---
8 PsiBlast_PDB 87.7129% -82 - C2 -2C2A ? A:[1-246] --------------------------------------------------------------------------------------------------------------------------------------------------------MENVTE--SKELERLKRIDRMKTEFIANISHELRTPLTAI-KAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLV--ESAVNAIK-----E----FASSHNVNVL--FES-NVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDK---YVKVILD--EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----------TGLGLAITKEIVELHGGRIWVE-S-EVG-K-G-SR-FFVWIP---
4 PsiBlast_PDB 87.1430% -79 - C2 -4JAS ? A:[13-246] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------LKRIDRMKTEFIANISHELRTPLTVI-KGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLV--ESAVNAIK-----E----FASSHNVNVL--FES-NVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDK---YVKVILD--EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD--SSLTYEVPGTGLGLAITKEIVELHGGRIWVE-S-EVG-K-G-SR-FFVWIP---
3 PsiBlast_PDB 85.9725% -81 - C2 -4U7O ? A:[27-261] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------EQQKIDNDRKQFVSNVSHELRTPLTSL-RSYIEALSDGAWK-DPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMF--NYVLDRFDMILKKD----DNPAKYYTIKREFTK-R-DLWVEI--DTDKFTQVLDNIMNNAIKYSP---DGG---VVTCRLL--ETHNQVIISISDQGLGIPRADLGHVFDRFFRVD--K-----QGGTGLGLAISKEVVQMLGGRIWVD-SVE-G-K-G-ST-FYISLP---
6 PsiBlast_PDB 84.4329% -77 - C2 -3DGE ? A:[14-246] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAI-KAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLV--ESAVNAIK-----E----FASSHNVNVL--FES-NVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDK---YVKVILD--EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD--SSLTYEVPGTGLGLAITKEIVELHGGRIWVE-S-EVG-K-G-SR-FFVWIP---
40 HHSearch 83.9730% -85 - C2 -2C2A ? A:[18-247] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------RMKTEFIANISHELRTPLTAI-KAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLV--ESAVNAIK-----E----FASSHNVNVLFESNVPC-PVEAYI--DPTRIRQVLLNLLNNGVKYSK---KDAPDKYVKVILD--EKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-----------TGLGLAITKEIVELHGGRIWVE-S-E-VGK-G-SR-FFVWIPK--
17 PsiBlast_PDB 83.0626% -65 - C2 -4CB0 CPXA_ECOLI A:[74-294] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------ERMMTSQQRLLSDISHELRTPLTRLQLG--TALLRRRSG-ESKEL----ERIETEAQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--SGGTGLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
16 PsiBlast_PDB 82.6026% -70 - C2 -4BIV CPXA_ECOLI A:[74-294] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------ERMMTSQQRLLSDISHELRTPLTRLQLG--TALLRRRSG-ESKEL----ERIETEAQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--SGGTGLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
2 PsiBlast_PDB 82.5925% -88 - C2 -4U7N - ? A:[39-261] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSNVSHELRTPLTSL-RSYIEALSDGAWK-DPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMF--NYVLDRFDMILKKD----DN---YYTIKREFTK-R-DLWVEI--DTDKFTQVLDNIMNNAIKYSP---DGG---VVTCRLL--ETHNQVIISISDQGLGIPRADLGHVFDRFFR-------------TGLGLAISKEVVQMLGGRIWVD-SVE-G-K-G-ST-FYISLP---
14 PsiBlast_PDB 81.5728% -81 - C2 -4BIX CPXA_ECOLI A:[83-294] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISHELRTPLTRLQLGTALLRRRSGES-KELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTD----------GTGLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
13 PsiBlast_PDB 81.5528% -78 - C2 -4BIW CPXA_ECOLI A:[83-294] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISHELRTPLTRLQLGTALLRRRSGES-KELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE--SGGTGLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
18 PsiBlast_PDB 80.1727% -76 - C2 -4BIZ CPXA_ECOLI A:[83-294] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISEELRTPLTRLQLGTALLRRRSGES-KELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRE----GTGLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
12 PsiBlast_PDB 80.1028% -80 - C2 -4BIU - CPXA_ECOLI A:[83-294] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISHELRTPLTRLQLGTALLRRRSGES-KELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTD------------GLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
15 PsiBlast_PDB 78.6728% -86 - C2 -4BIY CPXA_ECOLI A:[83-294] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLSDISHELRTPLTRLQLGTALLRRRSGES-KELE-RIETE-----AQRLDSMINDLLVMSR-NQQKNALVSETIKANQLW--SEVLDNAA-----F----EAEQMGKSLTVNFPP-G-PWPLYG--NPNALESALENIVRNALRYS-----HT---KIEVGFA--VDKDGITITVDDDGPGVSPEDREQIFRPFYRTD-----------TGLGLAIVETAIQQHRGWVKAEDS-P-L-G-G-LR-LVIWLPL--
9 PsiBlast_PDB 72.8629% -50 - C2 -4Q20 - DIVL_CAUCR A:[35-254] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAERLKRDFVGNVSYELRTPLTTI-IGYSELLERAD---SE-RGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQERALKD-----A----QLGGVTLAVECEEDV-G---LIRG--DGKRLAQTLDHLVENALRQTP---PGG---RVTLSAR--RALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRD--RG------GPGLGLALVKALVELHGGWVALE-S-E-P-G-N-GSTFTCHLP---
1 PsiBlast_PDB 71.8627% -66 - C2 -4I5S - ? A:[211-432] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVSNVSHELRTPLTSV-KSYLEALDDGALT-ESVAPSFI-KVSLDETNRMMRMITDLLSLSR-----SHLDVELTNFTAFM--NYILDRFD-----QIQSQQST----EIIRDYPD-K-SVWIEI--DTDKMTQVIDNILNNAIKYSP---DGG---KVTITMQ--TTDTQLILSISDQGLGIPKKDLPLIFDRFYRVD--KAR-------GLGLAIAKEIVKQHKGFIWAN-S-E-E-G-EGST-FTIVLP---
50 HHSearch 71.5532% -98 * C2 *3SL2 A:[3-151] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQIVRFM--SLIIDRFE-----M----T-KEQ--EFIRNLPD-R-DLYVEI--DQDKITQVLDNIISNALKYSP---EGG---HVTFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVD--------LGGTGLGLAIAKEMVQAHGGDIWAD-S-I-E-GKG-TT-ITFTLPY--
29 Fugue 70.1520% -62 - C2 -4I5S - ? A:[37-432] NNNQVKQLNAKVRSLITGHYTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITV-INDMAQKQLNVTREQALECNILDILDDDSYTYNDLITKTPEIVLTRRDEYDEFITLRIRFALNRRESGFISGLIAVLHDA-TEQEKEERERRLFVSNVSHELRTPLTSV-KSYLEALDDGALT-ESVAPSFI-KVSLDETNRMMRMITDLLSLSRSH-----LDVELTNFTAFM--NYILDRFD-----Q----IQSQQSTEIIRDYPD-K-SVWIEI--DTDKMTQVIDNILNNAIKYSP---DGG---KVTITMQ--TTDTQLILSISDQGLGIPKKDLPLIFDRFYRVD--KAR-------GLGLAIAKEIVKQHKGFIWAN-S-E-E-G-EGST-FTIVLP---
28 Fugue 69.9722% -73 - C2 -1ID0 A:[1-146] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RELHPVAPLL--DNLTSALN-----K----VYQRKGVNISLDIS--P-EISFVG--EQNDFVEVMGNVLDNACKYC-----LE---FVEISAR--QTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVD--TLRP----GQGVGLAVAREITEQYEGKIVAG-E-S-M-L-GGAR-MEVIFGRQH
10 PsiBlast_PDB 68.2730% -45 - C2 -4KP4 ENVZ_ECOLI A:[12-213] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTLLMAGVSHDLRTPLTRI-RAYAETIYNSLGELDLSTLKELAESINKDIEECNAIIEQFIDYLR---TGQEMPMEMADLNAVL--GEVIAAES-----G----Y--EREIETALYPGS-I-EVKM----HPLSIKRAVANMVVNAARYG-----NG---WIKVSSG--TEPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGD--SART--ISGTGLGLAIVQRIVDNHNGMLELG-T-S-E-R---------------