@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2446: (2016-04-03 )
MKRRTRKCSLVFILGILIFSCLSGFGTNVFAMDGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNITTWPIENGQDVWVEWTKNGVAQENVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKETGHAGKSGYTVEDTAEKVTVTTEDLSIEIQKSPYRMEVHQADGTLLTSEYTTANSLGWLTDGKNVINQYQNNFMTPSDEAFYGFGERYDTINQRGKDVETYVYNEYQDQAQTERTYLAVPFFVSANKYGMYVNSDFHSQFQMASKVEDKYSFVLDNDGDMTNMLDYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSANEWDRESDVSSALSNAKANDIPATGFVLEQWSDEETYYIWNNATYTAKKNGEAFSYDDFTFNGKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTVYEQRDNDEEYMISQGYSADDGTGAPYRVPASQWFGNGILLDFTNKDAVDWWTSQREYLLTEVGIDGFKTDGGEMVWGRDTTFSNGEKGQEMRNRYPTDYVSSYFDFAKSINPEAVSFSRSGTSGAQKSGIYWSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGFTGDYPTAELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDETILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMDYPEDVNARDLDEQYMFGDDLLVAPIVQEGQTEKEVYLPEGEWVDIWNGGVHPGGETISYYADVDTLPVFAKAGAIIPMNMTDGYQLGQNVGNDLKSYDNLTFRVYPSGDSEYSFYDDVNGGEMRDISVSEDFANEKVSVDLPAMADETTMQVFSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAEFGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK

Atome Classification :

(20 SA) ----.........10....---....20........30........40........50........60........-----70........80........90----........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.....------.-----.-200-.-----........210.......220.......230.......-.-240.........--250.....-..260.......270.......280...-....290-.........--300.....-....310.......320----..----.-----.....330.......340.-..-------------------------------------------------------------.----------------------------------------------------------------------------------------...350..------------.....360-----........370.......380.......390.......400-...--.--.....410.......420......-------.430.......440.......450.......460-........470.......480.......490...--....500.......510.....-.-.520.......530-------------------.---....----....540.......550...-------....560.---..---------------------------....-570..--------------------------------..-----------------------------------.-------.--..580.---------.---------..--------------------------------.....590.......600...--...--.--610--.......620-..-..-...630.......640.......650.......660.----------------------.-------------..-----.----------------------..670-------.........680.......690.......700.......710.--......720.......730.......740.......750..-.....760....-----...770.......780.......790..-.-....800-....-...810.......820.......830--.......840...------------....850.......860--.---.--......870-----........880..---------.....890.-----......900....-...910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070......1080......1090
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MKRRTRKCSLVFILG---ILIFSCLSGFGTNVFAMDGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNIT-----TWPIENGQDVWVEWTKNGVAQE----NVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKE------T-----G-H---A-----GKSGYTVEDTAEKVTVTTEDLSIEIQKSPY-RMEVHQA-D-G--TLLTSEYTT--ANSLGWLT-DGKNVINQYQNNFMTPSDEAFYGFGERY-DTINQ---RGKDVETYV--Y--NEYQD-QAQTERTYLAVPFFVS-----AN----K-----YGMYVNSDFHSQFQMASKV-ED-------------------------------------------------------------K----------------------------------------------------------------------------------------YSFVLDND------------GDMTNML------DYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSAN---EWD--R--ESDVSSALSNAKANDIPATGFVLE-------QWSDEETYYIWNNATYTAKKNGEAFSYDDFTF-N-GKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTV--YEQRDNDEEYMISQGYSADDGT-G-APYRVPASQWFG---------------------N---GILL----DFTNKDAVDWWTSQREYLLT-------EVGIDGFK---TD---------------------------GGEM-VW-GR--------------------------------DT-----------------------------------T-------F--SNG--E---------K---------GQ--------------------------------EMRNRYPTDYVSSYFDFAKSI--NPE--A--VSF--SRSGTSGAQK-SG-IY-WSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGF----------------------T-------------GD-----Y----------------------PTA---------ELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDE--TILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMD-YPEDVNARDLDE-----QYMFGDDLLVAPIVQEGQTEKEVYLPEG-E-WVDIWNG-GVHP-GGETISYYADVDTLPVFAKAGAIIPM--NMTDGYQLGQNVG------------NDLKSYDNLTFRVYPS---G---D--SEYSFYDD------VNGGEMRDISVSE---------DFANEKVSV-----DLPAMADETTMQV-FSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAEFGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK
2 PsiBlast_PDB 85.6197% -57 - C1 -4KWU ? A:[26-1084] ---------------------------------------DGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNIT-----TWPIENGQDVWVEWTKNGVAQE----NVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKE------T-----G-H---A-----GKSGYTVEDTAEKVTVTTEDLSIEIQKSPY-RMEVHQA-D-G--TLLTSEYTT--ANSLGWLT-DGKNVINQYQNNFMTPSDEAFYGFGERY-DTINQ---RGKDVETYV--Y--NEYQD-QAQTERTYLAVPFFVS-----AN----K-----YGMYVNSDFHSQFQMASKV-ED-------------------------------------------------------------K----------------------------------------------------------------------------------------YSFVLDND------------GDMTNML------DYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSAN---EWD--R--ESDVSSALSNAKANDIPATGFVLE-------QWSDEETYYIWNNATYTAKKNGEAFSYDDFTF-N-GKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTV--YEQRDNDEEYMISQGYSADDGT-G-APYRVPASQWFG---------------------N---GILL----DFTNKDAVDWWTSQREYLLT-------EVGIDGFK---TD---------------------------GGEM-VW-GR--------------------------------DT-----------------------------------T-------F--SNG--E---------K---------GQ--------------------------------EMRNRYPTDYVSSYFDFAKSI--NPE--A--VSF--SRSGTSGAQK-SG-IY-WSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGF----------------------T-------------GD-----Y----------------------PTA---------ELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDE--TILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMD-YPEDVNARDLDE-----QYMFGDDLLVAPIVQEGQTEKEVYLPEG-E-WVDIWNG-GVHP-GGETISYYADVDTLPVFAKAGAIIPM--NMTDGYQLGQNVG------------NDLKSYDNLTFRVYPS---G---D--SEYSFYDD------VNGGEMRDISVSE---------DFANEKVSV-----DLPAMADETTMQV-FSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAEFGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK
1 PsiBlast_PDB 85.2197% -57 * C1 *4KMQ ? A:[26-1084] ---------------------------------------DGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNIT-----TWPIENGQDVWVEWTKNGVAQE----NVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKE------T-----G-H---A-----GKSGYTVEDTAEKVTVTTEDLSIEIQKSPY-RMEVHQA-D-G--TLLTSEYTT--ANSLGWLT-DGKNVINQYQNNFMTPSDEAFYGFGERY-DTINQ---RGKDVETYV--Y--NEYQD-QAQTERTYLAVPFFVS-----AN----K-----YGMYVNSDFHSQFQMASKV-ED-------------------------------------------------------------K----------------------------------------------------------------------------------------YSFVLDND------------GDMTNML------DYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSAN---EWD--R--ESDVSSALSNAKANDIPATGFVLE-------QWSDEETYYIWNNATYTAKKNGEAFSYDDFTF-N-GKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTV--YEQRDNDEEYMISQGYSADDGT-G-APYRVPASQWFG---------------------N---GILL----DFTNKDAVDWWTSQREYLLT-------EVGIDGFK---TD---------------------------GGEM-VW-GR--------------------------------DT-----------------------------------T-------F--SNG--E---------K---------GQ--------------------------------EMRNRYPTDYVSSYFDFAKSI--NPE--A--VSF--SRSGTSGAQK-SG-IY-WSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGF----------------------T-------------GD-----Y----------------------PTA---------ELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDE--TILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMD-YPEDVNARDLDE-----QYMFGDDLLVAPIVQEGQTEKEVYLPEG-E-WVDIWNG-GVHP-GGETISYYADVDTLPVFAKAGAIIPM--NMTDGYQLGQNVG------------NDLKSYDNLTFRVYPS---G---D--SEYSFYDD------VNGGEMRDISVSE---------DFANEKVSV-----DLPAMADETTMQV-FSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAEFGHLTNVTTAS-HAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK
43 HHSearch 60.6026% -43 - C1 -2F2H XYLS_ECOLI A:[51-711] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLFTLRFFSPQEGIVGVRIEHFQGA------LNNGPHY-P---LNIL--QDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFL-R-N-G--ERITGSQV----KNNGYVQ-DTNNQRNYMFERLDLGVGETVYGLGERF-TALVR---NGQTVETWN--R--DGG----TSTEQAYKNIPFYMT-----NR----G-----YGVLVNHPQCVSFEVGSEK-VS-------------------------------------------------------------K----------------------------------------------------------------------------------------VQFSVE-----------------SEYL------EYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTS---FTTNYD--EATVNSFIDGMAERNLPLHVFH--------------------FDCFWMKA-----FQWCDFEWDP-LTFPDPEGMIRRLKAKGLKICVWINPYIGQKS-----P----VFKELQEKGYLLKRPD-G-SLWQWD--KWQP---------------------G---LAIY----DFTNPDACKWYADKLKGLVA--------MGVDCFK---TD---------------------------FGER-IP--T--------------------------------DV-----------------------------------Q-------W--FDG--S---------D---------PQ--------------------------------KMHNHYAYIYNELVWNVLKDTVGEEE--A--VLF--ARSASVGAQK-FP-VH-WGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGF----------------------E-------------NT----------------------------APA---------HVYKRWCAFGLLSSHSRLHGSKS------YRVPWAYDDE-------SCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMME-FPDDPACDYLDR-----QYMLGDNVMVAPVFTEA-GDVQFYLPEG-R-WTHLWHN-DELD-GSRWHKQQHGFLSLPVYVRDNTLLAL--GNNDQR-------------------PDYVWHEGTAFHLFNL---QDGHE--AVCEVPAA------DG--SVI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 HHSearch 59.8924% -36 - C1 -2XVL ? A:[45-945] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------ALAQVERTAEGVVLTLPEG---TVKKLRLQVMGERIIRVTALPGTDF------GI----VPESIQVVAKPATNVPFSVDQAGEKLVLKTSQVSAEVSLLDG-TVSFRDA-K-G--NVLLQEENRGTFSPVIHDPDPVDADSYALRQEFNRGSDEGFFGLGQHQNGQVNY---AGENVELTT--Y-------------NLVISIPFLVS-----SR----N-----YGLLWDNNSITRFGDPREA-QPLNQSLKLYDAEGKEGGLTVRYFVGDELKLTRVEADFNHQFYKQGNELENPFPEEVAGAYKNNTLRIELEGSIEAQATGKHQFKMYNSGYAQLSLDGEVVLDRWRMNWNPWYHNFYRELNAGDKHKLKVSWKPDGGFFHLRHLDPLPANEQHELSL--A------------SETGKAI------DYYFVAGDTKDDIISGYRQLTGKSVMLPKWAYGFWQSRE---RYK--S--SDEIIQNLKEYRDRKIPIDNIV--------------------LDWSYWPED-----AWGSHDFDK-QFFPDPKALVDKVHAMNAQIMISVWPKFYPTTD---------NYKELNAKGFMFNRNL-D-EK----NLDWIG---------------------KGYLNAFY----DPFSPEATAIFWKQIRDKIN-------VHGFDAWW---LD---------------------------AVEP-DI-HS--------------------------------NL-----------------------------------TFEKRKWLMTPNAR--G---------N---------GA--------------------------------EIFNAYAVPHAEGVYQGELATDGDKR--S--FIL--TRSGFGGIQR-TGSAI-WSGDIVSRWSDMKDQIAAGIGTNLAGVTNWTFDIGGF----------------------T-------------PE-----DRFRHGKKGFVGSWTALDAEQVDEWQ---------ELNTRWYQFGAFVPLYRSHGQN------PYREIFNIADEG--T--EVYNAMVWYTKLRYYLMPYIYTLGGDTYHKDGTIMRGLVMD-FPNDRKAWDINT-----QYMFGPAFLVNPVYEYKARSRDVYLPAGSD-WYNFYTG-EKLA-GGQTITADAPLARVPLFVKAGAIVPT--GPLIQH-------------------VDEGLNSPLLITVYTG---A---N--GSFDIYED------DG--RSLKYQQGEWSRIPLSY-DDVTGTLII-----GDRVGSFTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
67 Fugue 59.8421% -38 - C1 -4BA0 OL4AG_CELJU A:[35-817] --------------------------------------------------------------------------------------------------------------------------------------------------------------------AVFYKEHKLRNDGLVITTN------QGNIRLQFKSEAAIEVLYRADSKQLPSFALA-----Q-P---E-----SAIKAQLTETENHLQFSGGTLTARIQKRPF-AISYYRD-S-E--LLLAEESGF--QV-------------NKINFRFYLSPGEKILGGGQRI-LGMDR---RGQRFPLYN--R--AHYGY-SDHSGQMYFGLPAIMS-----SK----Q-----YILVFDNSASGAMDIGKTE-SD-------------------------------------------------------------I----------------------------------------------------------------------------------------LQLEAKSG------------R-----S------AYILVAGNSYPSLIENFTQVTGRQPLPPRWALGSFASRF---GYR--S--EAETRATVQKYKTEDFPLDTIVL--------------------DLYWFGKDIKG--HMGNLDW-DKENFPTPLDMMADFKQQGVKTVLITEPFVLTSSKR--WDDAVKA-------KALAKDPQ-G-QPKAFEL--YFG---------------------N---GGII----DVFSKEGSRWFSSIYKDLSK-------Q-GVAGWW---GD---------------------------LGEP-EM-HP--------------------------------ED-----------------------------------T-------Q--HAI--G---------D---------AD--------------------------------TVHNAYGHRWAEMLYQQQLDQ--FPELRP--FIM--MRAGFVGSQR-YG-MIPWTGDVSRTWGGLASQVELALQMSLLGFGYIHSDLGGF----------------------A-------------DG-----ET---------------------LDK---------EMYIRWLQYGVFQPVYRPHG--QDHIPSE---PVFQ-----DE--ETKAILRPLVKLRYRMLPYIYTAAYQNTLTGMPLMRPLFFS-DEKNPALIDNKT-----SYFWGDSLLVTPITQAGVESVSIPAPKG-V-WFDFWKD-TRYQTDGAPLTLPTDLHTIPVLVKAGAFMPY--VPAVST-------------------TEDYRSDSLEIHYYADASVP---L--AQGEIFED------------------------------------------------------------------DGKD---------PNSIKRNQFDLLTLQATHTD-------------------------NQLHFQLARTGKGYRGM----------------------PERRATTLVIH-NASDQYQHLDINGKTIAIAQADCAS------TPALACYDQERRQLQLVFTWGREA----LNLRLHK