@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2462: (2016-04-03 )
MRVIDTHCDALYKLQAGKGKYTFQDAEELDVNFERLIEAKMLLQGFAIFLDEDIPVEHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLPEDKIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEFVIASHSSAKAICAHPRNLDDEQIKAMIEHDAMIHVIFHPLFTTNDGVADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAGKYQNFLETLGKHYTKEEVEGFASRNFLNHLPK

Atome Classification :

(20 SA) -------------.........10......------..-20---.------..---.--.--....30........40........50...-..-----------------------...60---.........70........80........90...-.-..-...100.......110.......120.......130-----........140.------.--------...-.------.150.......160.......170.......180.....-.-.190.......200.......210.......220.......230---------------------------------------.--------------------------------------------------------......240.......250.......260.......270.......280-....-..-.290.......300......---------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------MRVIDTHCDALYKLQAG------KG-K----Y------TF---Q--D--AEELDVNFERLIEAKMLLQGFAIFLDEDI-PV-----------------------EHKW----KKAVEQVNIFKQHVLHKGGIIHHVKKWCDL-ENL-P-ED-KIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLT------WNNANLAADGIM------E--------ERG-A------GLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEF-V-IASHSSAKAICAHPRNLDDEQIKAMIEHDAMIHVIFHPLFTTND---------------------------------------G--------------------------------------------------------VADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAGKYQNFL-ETLG-KH-YTKEEVEGFASRNFLNHLPK---------------------------------
2 PsiBlast_PDB 99.0198%-115 - C4 -3LU2 ? A:[5-311] --------------RVIDTHCDALYKLQAG------KG-K----Y------TF---Q--D--AEELDVNFERLIEAKMLLQGFAIFLDEDI-PV-----------------------EHKW----KKAVEQVNIFKQHVLHKGGIIHHVKKWCDL-ENL-P-ED-KIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLT------WNNANLAADGIM------E--------ERG-A------GLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEF-V-IASHSSAKAICAHPRNLDDEQIKAMIEHDAMIHVIFHPLFTTND---------------------------------------G--------------------------------------------------------VADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAGKYQNFL-ETLG-KH-YTKEEVEGFASRNFLNHLPK---------------------------------
21 PsiBlast_CBE 98.5096%-117 - C4 -3NEH ? B:[3-310] -------------LRVIDTHCDALYKLQAG------KG-K----Y------TF---Q--D--AEELDVNFERLIEAKMLLQGFAIFLDEDI-PV-----------------------EHKW----KKAVEQVNIFKQHVLHKGGIIHHVKKWCDL-ENL-P-ED-KIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLT------WNNANLAADGIM------E--------ERG-A------GLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEF-V-IASHSNAKAICSHPRNLDDEQIKAMIEHDAMIHVVFYPLFTTNN---------------------------------------G--------------------------------------------------------VADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGKYQSFL-ETLE-KH-YTKEEIEGFASRNFLNHLPK---------------------------------
1 PsiBlast_PDB 98.0096%-115 - C4 -3NEH ? A:[3-310] -------------LRVIDTHCDALYKLQAG------KG-K----Y------TF---Q--D--AEELDVNFERLIEAKMLLQGFAIFLDEDI-PV-----------------------EHKW----KKAVEQVNIFKQHVLHKGGIIHHVKKWCDL-ENL-P-ED-KIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLT------WNNANLAADGIM------E--------ERG-A------GLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEF-V-IASHSNAKAICSHPRNLDDEQIKAMIEHDAMIHVVFYPLFTTNN---------------------------------------G--------------------------------------------------------VADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGKYQSFL-ETLE-KH-YTKEEIEGFASRNFLNHLPK---------------------------------
22 HHSearch 97.5296%-113 - C4 -3NEH ? A:[3-310] -------------LRVIDTHCDALYKLQAG------KG-K----Y------TF---Q--D--AEELDVNFERLIEAKMLLQGFAIFLDEDI-PV-----------------------EHKW----KKAVEQVNIFKQHVLHKGGIIHHVKKWCDL-ENL-P-ED-KIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLT------WNNANLAADGIM------E--------ERG-A------GLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAE--FVIASHSNAKAICSHPRNLDDEQIKAMIEHDAMIHVVFYPLFTTNN---------------------------------------G--------------------------------------------------------VADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVGKYQSFL-ETLE-KH-YTKEEIEGFASRNFLNHLPK---------------------------------
42 Fugue 72.5126% -89 - C4 -1ITU DPEP1_HUMAN A:[1-369] DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDE-R----A------NL---T--T--LAGTHTNIPKLRAGFVGGQFWSVYTPCDT-QN-----------------------KDAV----RRTLEQMDVVHRMCRMYPETFLYVTSSAGI-RQA-F-REGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLT------HSCNTPWADNWL------V--------DTG-DSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPV-IFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCT---------------------------------------N--------------------------------------------------------KANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLI-AELL-RRNWTEAEVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSS
28 HHSearch 71.4527% -83 - C4 -1ITU DPEP1_HUMAN A:[14-336] -------------SPVIDGHNDLPWQLLDM------FN-N----RLQDERANL---T--T--LAGTHTNIPKLRAGFVGGQFWSVYTPCDT-QN-----------------------KDAV----RRTLEQMDVVHRMCRMYPETFLYVTSSAGI-RQA-FREG-KVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLT------HSCNTPWADNWLVDTGDSE--------PQS-Q------GLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRA-PVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCT---------------------------------------N--------------------------------------------------------KANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLI-AELLRRN-WTEAEVKGALADNLLRVFEA---------------------------------
9 PsiBlast_PDB 69.8324% -90 - C4 -3S2J ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
7 PsiBlast_PDB 69.7624% -92 - C4 -3ITC ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
11 PsiBlast_PDB 69.6524% -91 - C4 -3S2M ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
26 HHSearch 69.3926% -89 - C4 -3ID7 ? A:[14-368] -------------FPVVDGHNDLPWALREQ------VR-YDLDAR------DI---A--ADQSAHLHTDLARLRSGGVGAQYWSVYVRSDL--------------------------PGAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAA-RAEG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSATD-----E--------PGV-G------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTA-PVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQAAVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP--------------------------------------------------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLI-AELLDRG-WSQSDLAKLTWKNAVRVLDA---------------------------------
8 PsiBlast_PDB 69.3224% -91 - C4 -3ISI ? X:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
12 PsiBlast_PDB 69.1924% -91 - C4 -3S2N ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
10 PsiBlast_PDB 68.9924% -91 - C4 -3S2L ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
6 PsiBlast_PDB 68.6524% -92 - C4 -3K5X ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
5 PsiBlast_PDB 68.4824% -90 - C4 -3ID7 ? A:[48-366] -----------------------------------------------------------------LHTDLARLRSGGVGAQYWSVYVRSDL-P-------------------------GAV----TATLEQIDCVRRLIDRHPGELRAALTAADM-EAARA-EG-RIASLMGAEGGHSIDNSLATLRALYALGVRYMTLT------HNDNNAWADSAT------D--------EPGVG------GLSAFGREVVREMNREGMLVDLSHVAATTMRDALDTSTAPV-IFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKFVLQA---------------------------------------AVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRP-----------------VATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDGLGDVSGYPNLIAELLD-RG-WSQSDLAKLTWKNAVRVL-----------------------------------
23 HHSearch 67.3520% -90 - C4 -2RAG ? A:[47-407] -------------FLTLDTHLDTPAHFGRP---------G----W------DIADHHEVE--HDFSQVDLPRMNQGGLDGGFFVVYIGQGELTEKGY--------------------TYAR----DYALHRTIEIREMLAANPDTFEMALTSDDA-RRI-AKAG-KKFAFVSMENSWPVGEDLSLVETFYKEGLRMAGPV------HFRNNQLADSST------DPKG-----KIW-N------GYSPLGLRWLAEANRLGIVIDVSHASDDVVDQSVALSKA-PIIASHSGPKAVYDHPRNLDDARLKKIADAGGAICINSI--YLTDT---------------------------------------TPSPEAPDMKTATPEAVKAYADKRAAIDKAHPAA-----------------------RGDFDLYMKSMLHVLKVAGPKGVCVGADWDGGGG-MDGFEDITDLPKIT-ARLKAEG-YSDADIEAIWSGNVLRIVDA---------------------------------
27 HHSearch 65.9725% -83 - C4 -3LY0 ? A:[7-353] -------------IPVFDGHNDFLLRLLRN------PANR----E------TI---WLKG--DGTGHLDLPRMKEGGFAGGFFAIYVPSPQAHDAAHFEAMMDAPPFELPLPPMIRAEQAQ----PVALAMAGHLLWMERAARGRFKVCRTAAEV-RSC-HADG-IVSGIMHMEGAEAIGADLDALHLFHSLGLRSLGPV------WSRPTVFGHGVP------FRFPGSP--DTG-E------GLTEAGRRLVAECNRLKIMLDLSHLNEKGFDDVARLSDA-PLVATHSNAHAVTPSTRNLTDRQLAMIRESRGMVGLNFATSFLRED---------------------------------------GRRSA----------------------------------------------------EMGWEPVLRHLDHLIDRLGEDHVGMGSDFDGATI-PQGIADVTGLPALQ-AAMRAHG-YDEPLMRKLCHENWYGLLER---------------------------------
3 PsiBlast_PDB 64.8428% -80 - C4 -1ITQ DPEP1_HUMAN A:[63-331] --------------------------------------------------------------------------------QFWSVYTPCDT-QN-----------------------KDAV----RRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAF-R-EG-KVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDS------E--------PQS-Q------GLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPV-IFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCT---------------------------------------N--------------------------------------------------------KANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLR-RN-WTEAEVKGALADNLL--------------------------------------
24 HHSearch 64.8320% -90 * C4 *3B40 ? A:[22-406] -------------ILSFDSRITVPLDFGTT---------G----N------EV---D--K--DGPGQLDLVKAGRGRLSGAALAIFGWPEMW--PHKPT------------------PGFVDEARHQQEIRYKILTGMVRDFPNQVGIAYSPEDF-RRL-AMEG-KFAIVMSMLNAYPLGDDLSQLDKWAARGVRMFGFS------YVGNNDWADSSR------PLPFFNDSPDAL-G------GLSPLGKQAVERLNDLGVIIDVSQMSTKALEQVAALSRA-PIVASHSAPRALVDIKRNLSDHEMQLIKDSGGVIQVVGFPAYLRPL---------------------------------------SKPTLDKLDALRARFDLPPLEGLDYALMPGDPIITIWPEQRFGEYASALYGILEEEPKAGLKELVDAIDYTVKKVGIDHVGISSDFNDGGG-VDGWKDVSEIRNVT-AELITRG-YSDADIAKLWGGNFLRAWGE---------------------------------
4 PsiBlast_PDB 63.8228% -81 - C4 -1ITU DPEP1_HUMAN A:[63-331] --------------------------------------------------------------------------------QFWSVYTPCDT-QN-----------------------KDAV----RRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAF-R-EG-KVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDS------E--------PQS-Q------GLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPV-IFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCT---------------------------------------N--------------------------------------------------------KANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLR-RN-WTEAEVKGALADNLL--------------------------------------