@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2500: (2016-04-04 )
MKKLWLKIGLSFFILFFVVMVIVGIFSGELMKSTYLNMKENQLEDDAKILLQTTNMENLDLDKDAATIQKSLDPLGEDIDARITVIDSKGDVVADTKKDPEKLDNHMNRPEVTDILKKGESVGISIRESDSLGYSMLYVAVPVKHQSKTDGVLRISISLESVDAAVAKLWGNLALIFGIALVIIAAISVFIARKITRPVREIIEVSTDLANHKYDSRIHGKISGELQDLSISVNTLAESLETQMFEIKQNEQRLNAIVQNLVSGVMLINVDKQVIMTNRTMYQILGETEITGKPFYEVIKSFALSQLIEATFETKTIQQKEIILYFPREMILDASVSPILGENGEITGIILLLHDITQIRHLENVRSEFVTNVSHELKTPVTALKGFAETLLDGAMYDEMLLKKFLTIIKEESDRLHRLIMDILALSRIEQNPVPENVELVEVDEVIEQSARTIFEMATEKNIQVIIPEKTIPSVTIETDRDKLQQILINLLSNAINYTPVDGKVEVKLIEQEAEVIIEVTDNGIGIPAKDIDRVFERFYRVDKARSRHSGGTGLGLSIVKHLVENCGGRIEVESQEEVGSTFRVTLPKKA

Atome Classification :

(22 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280....--..--.--290.-----......--300.........310.......320......--.330.......340...-.-...350.......360.---------..---------....370.......380.......390..-...-..400.......410.......420.......430.--......440----.-......450.......460.-----....--...470.......480.......490.......500.---.---.--....510-........520.......530.......540.......550.......560...-.-...570.......580.......590
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKKLWLKIGLSFFILFFVVMVIVGIFSGELMKSTYLNMKENQLEDDAKILLQTTNMENLDLDKDAATIQKSLDPLGEDIDARITVIDSKGDVVADTKKDPEKLDNHMNRPEVTDILKKGESVGISIRESDSLGYSMLYVAVPVKHQSKTDGVLRISISLESVDAAVAKLWGNLALIFGIALVIIAAISVFIARKITRPVREIIEVSTDLANHKYDSRIHGKISGELQDLSISVNTLAESLETQMFEIKQNEQRLNAIVQNLVSGVMLINVDKQVIMTNRTMYQILG--ET--E--ITGK-----PFYEVI--K--SFALSQLIEATFETKTIQQKEIILYFPR--EMILDASVSPILGENGE-I-TGIILLLHDITQIRHLE---------NV---------RSEFVTNVSHELKTPVTALKGFAETLLDG-AMY-DEMLLKKFLTIIKEESDRLHRLIMDILALSRIEQNP--VPENVELVE----V-DEVIEQSARTIFEMATE-KN-----IQVI--IPEKTIPSVTIETDRDKLQQILINLLSNAINYTPVDG---K---V--EVKLIE--QEAEVIIEVTDNGIGIPAKDIDRVFERFYRVDKARSRHSGGTGLGLSIVKHLVE-N-CGGRIEVESQEEVGSTFRVTLPKKA
2 PsiBlast_PDB 83.7943% -82 - C4 -4U7O ? A:[25-261] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTEQQKID---------ND---------RKQFVSNVSHELRTPLTSLRSYIEALSDG-AWK-DPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGT--TRVDMELVN----I-NEMF-NYVLDRFDMILK-KDDNPAKYYTI--KREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGG---V---V--TCRLLE--THNQVIISISDQGLGIPRADLGHVFDRFFRVDK-----QGGTGLGLAISKEVVQ-M-LGGRIWVDSVEGKGSTFYISLP---
6 PsiBlast_PDB 83.2938% -87 - C4 -4JAV ? A:[9-247] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELERLKRID---------RM---------KTEFIANISHELRTPLTAIKAYAETIYNSLGEL-DLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
65 Fugue 82.2531% -66 * C6 *4I5S - ? A:[37-432] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNNQVKQLNAKVRSLITGHYTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLNVTRE--Q--ALEC-----NILDILDDD--SYTYNDLITKTPEIVLTRRDE----YDE--FITLRIRFALNRRESGF-I-SGLIAVLHDATEQEKEE---------RE---------RRLFVSNVSHELRTPLTSVKSYLEALDDG-ALT-ES-VAPSFIKVSLDETNRMMRMITDLLSLSRSHLDV-------ELTN----F-TAFMNYILDRFDQIQSQ-QS-----TE-I--IRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGG---K---V--TITMQT--TDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVK-Q-HKGFIWANSEEGEGSTFTIVLP---
1 PsiBlast_PDB 81.9243% -83 - C4 -4U7N - ? A:[39-261] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSNVSHELRTPLTSLRSYIEALSDG-AWK-DPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGT--TRVDMELVN----I-NEMF-NYVLDRFDMILK-KDDN---YYTI--KREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGG---V---V--TCRLLE--THNQVIISISDQGLGIPRADLGHVFDRFFR-----------TGLGLAISKEVVQ-M-LGGRIWVDSVEGKGSTFYISLP---
23 PsiBlast_CBE 81.5238% -79 - C4 -3DGE ? B:[14-247] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRID---------RM---------KTEFIANISHELRTPLTAIKAYAETIYNSLGEL-DLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
22 PsiBlast_CBE 81.0538% -87 - C4 -4JAV ? B:[9-247] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELERLKRID---------RM---------KTEFIANISHELRTPLTAIKAYAETIYNSLGEL-DLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
8 PsiBlast_PDB 80.8338% -93 - C4 -4JAU ? A:[9-247] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELERLKRID---------RM---------KTEFIANISHELRTPLTVIKGYAEMIYNSLGEL-DLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDS---------GLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
5 PsiBlast_PDB 79.5738% -82 - C4 -3DGE ? A:[14-247] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRID---------RM---------KTEFIANISHELRTPLTAIKAYAETIYNSLGEL-DLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
21 PsiBlast_CBE 78.6343% -73 - C4 -4U7O ? B:[37-261] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFVSNVSHELRTPLTSLRSYIEALSDG-AWK-DPEVAPGFLKVTQEETDRMIRMINELLSLS--------TRVDMELVN----I-NEMF-NYVLDRFDMILK-KDDNPAKYYTI--KREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGG---V---V--TCRLLE--THNQVIISISDQGLGIPRADLGHVFDRFFRVDKAR---QGGTGLGLAISKEVVQ-M-LGGRIWVDSVEGKGSTFYISLP---
7 PsiBlast_PDB 77.9538% -78 - C4 -4JAS ? A:[13-247] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKRID---------RM---------KTEFIANISHELRTPLTVIKGYAEMIYNSLGEL-DLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
45 HHSearch 77.9241% -83 - C4 -2C2A ? A:[18-248] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RM---------KTEFIANISHELRTPLTAIKAYAETIYNS-LGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKY---V--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPKD-
4 PsiBlast_PDB 77.1538% -89 - C4 -2C2A ? A:[9-247] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELERLKRID---------RM---------KTEFIANISHELRTPLTAIKAYAETIYNSLGEL-DLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKS--LQINREKVD----L-CDLVESAVNAIKEFASS-HN-----VNVL--FESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDA---PDKYV--KVILDE--KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD---------TGLGLAITKEIVE-L-HGGRIWVESEVGKGSRFFVWIPK--
3 PsiBlast_PDB 75.5133% -64 - C6 -4I5S - ? A:[56-432] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLN--VTREQ--ALEC-----NILDIL--DDDSYTYNDLITKTPEIVLTRRDE----YDE--FITLRIRFALNRRESGF-I-SGLIAVLHDATEQEKEE---------RE---------RRLFVSNVSHELRTPLTSVKSYLEALDDG-AL--TESVAPSFIKVSLDETNRMMRMITDLLSLSR-------SHLDVELTNFTAFM-NYILDRFDQIQSQQST----------EIIRDYPDK---SVWIEIDTDKMTQVIDNILNNAIKYSPDGG---K---V--TITMQT--TDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVK-Q-HKGFIWANSEEGEGSTFTIVLP---
10 PsiBlast_PDB 68.0730% -71 - C4 -4Q20 - DIVL_CAUCR A:[37-255] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E---------RL---------KRDFVGNVSYELRTPLTTIIGYSE-LLER-AD---SERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGE--MALEIEDIR----V-SDLLLNAQERALKDAQL-GG-----VTLA--V-ECEEDVGLIRGDGKRLAQTLDHLVENALRQTPPGG---R---V--TLSARR--ALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRDR------GGPGLGLALVKALVE-L-HGGWVALESEPGNGSTFTCHLPE--
11 PsiBlast_PDB 68.0526% -82 - C4 -3A0R ? A:[12-344] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SILESLETAIITLSKDGRITEWNKKAEQLFGLKKE--N--VLGRRLKDLPDFEEI--G--SVA-----ESVFENK----EPVFLNFYKFGERYFNIRFSPFRNAKTQ-LLEGVIITIDDVTELYKYEEERKRRERLSI---------LGEMTARVAHEIRNPITIIGGFI-MRMKK-HLD-DPETLKKYINIITNELSRLETIVKEILEYSKER-----VLEFTEF-N----L-NELIREVYVLFEEKIRK-MN-----IDFC--F-ETDNEDLRVEADRTRIKQVLINLVQNAIEATGENG---K---I--KITSED--MYTKVRVSVWNSGPPIPEELKEKIFSPFF------TT------LGLSICRKIIE-DEHGGKIWTENREN-GVVFIFEIPK--
43 HHSearch 67.3926% -79 - C4 -3A0R ? A:[9-345] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSESILESLETAIITLSKDGRITEWNKKAEQLFG--LK--KENVLGR-----RLKDLP--D--FEEIGSVAESVFENKEP--VFLNFYKFG--ERYFNIRFSPFRNAKTQLL-EGVIITIDDVTELYKYE---------EERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKH-LD--DPETLKKYINIITNELSRLETIVKEILEYSKER------VLEFTEFN----L-NELIREVYVLFEEKIRK-MN-----IDFC--FETDN-EDLRVEADRTRIKQVLINLVQNAIEATGENG---K---I--KITSED--MYTKVRVSVWNSGPPIPEELKEKIFSPFFTT------------LGLSICRKIIEDE-HGGKIWTENR-ENGVVFIFEIPKT-
18 PsiBlast_PDB 63.8229% -60 - C4 -4BIV CPXA_ECOLI A:[70-293] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTALERMM---------TS---------QQRLLSDISHELRTPLTRLQ-LGTALLRR-RSG-ESKELER----IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQ----LWSEVLDNAA---FEAEQMGKS-----LTVN--FPPGPWP---LYGNPNALESALENIVRNALRYSHT-----K---I--EVGFAV--DKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQ-Q-HRGWVKAEDSPLGGLRLVIWLP---
14 PsiBlast_PDB 63.6029% -54 - C4 -4BIW CPXA_ECOLI A:[70-293] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTALERMM---------TS---------QQRLLSDISHELRTPLTRLQ-LGTALLRR-RSG-ESKELER----IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQ----LWSEVLDNAAFEAEQMG---KS-----LTVN--FPPGPWP---LYGNPNALESALENIVRNALRYSHT-----K---I--EVGFAV--DKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQ-Q-HRGWVKAEDSPLGGLRLVIWLP---
19 PsiBlast_PDB 63.4229% -49 - C4 -4CB0 CPXA_ECOLI A:[70-293] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTALERMM---------TS---------QQRLLSDISHELRTPLTRLQ-LGTALLRR-RSG-ESKELER----IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQ----LWSEVLDNAA---FEAEQMGKS-----LTVN--FPPGPWP---LYGNPNALESALENIVRNALRYSHT-----K---I--EVGFAV--DKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQ-Q-HRGWVKAEDSPLGGLRLVIWLP---
12 PsiBlast_PDB 63.1126% -70 - C4 -3D36 ? A:[3-223] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMVIR----------------------------LAASISHEIRNPLTAARGFIQLIEEQ-PLA-ADKR-RQYARIAIEELDRAEAIITDYLTFAK----P--APETPEKLN----V-KLEIERVIDILRPLA----N-----MSCV--DIQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGG---T---L--QVYVSI--DNGRVLIRIADTGVGMTKEQLERLGEPYFTTKGVK-----GTGLGMMVVYRIIE-S-MNGTIRIESEIHKGTTVSIYLP---
52 HHSearch 58.3141% -66 - C4 -3SL2 A:[3-152] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQ----I-VRFMSLIIDRFEMT-KE-Q-------EFI--RNLPD-RDLYVEIDQDKITQVLDNIISNALKYSPEGG---H---V--TFSIDVNEEEELLYISVKDEGIGIPKKDVEKVFDRFYRVD------LGGTGLGLAIAKEMVQ-A-HGGDIWADSIEGKGTTITFTLPYK-
9 PsiBlast_PDB 53.8246% -52 - C4 -3SL2 A:[16-152] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEMTKE-Q-------EFIRNLPDR---DLYVEIDQDKITQVLDNIISNALKYSPEGG---H---VTFSIDVNE--EEELLYISVKDEGIGIPKKDVEKVFDRFYRVD------LGGTGLGLAIAKEMVQ-A-HGGDIWADSIEGKGTTITFTLPYK-