@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2501: (2016-04-04 )
LVKILVVDDEASIVTLLQFNIEKAGFEVVTAEDGRTGYELALSEKPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLTAKDEELDKIIGLELGADDYMTKPFSPREVVARIKAILRRTEGKAEIIEELTEDVEATILIGDLKILPDSYEVYLQDDLLDLTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQPKYIKTIRGFGYKMENVK

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100...-....110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) LVKILVVDDEASIVTLLQFNIEKAGFEVVTAEDGRTGYELALSEKPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLTAKDEELDKIIGLELGADDYMTKPFS-PREVVARIKAILRRTEGKAEIIEELTEDVEATILIGDLKILPDSYEVYLQDDLLDLTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQPKYIKTIRGFGYKMENVK
113 HHSearch 86.7340%-106 - C5 -1YS7 PRRA_MYCTU A:[8-232] -PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFV-LAELVARVKALLRRRGSTATS-------SSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFA-DTNVVDVFIGYLRRKLEAG---PRLLHTVRGVGFVLRM--
112 HHSearch 84.9244%-110 - C4 -2GWR MTRA_MYCTU A:[7-228] --RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD-SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFK-PKELVARVRARLRRNDDEPAE----------MLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP-
23 PsiBlast_CBE 82.1036%-109 - C4 -4KNY KDPE_ECOLI B:[3-225] MANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSA-VPVIVLSARSEESDKIAALDAGADDYLSKPFG-IGELQARLRVALRRHSA--------TTAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRF----
18 PsiBlast_PDB 81.4942%-106 - C4 -2GWR MTRA_MYCTU A:[7-224] --RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADS-GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFK-PKELVARVRARLRRNDD--EPAEMLS--------IADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYK-----
118 HHSearch 80.6136%-113 - C4 -1KGS ? A:[3-224] -VRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFD-LRELIARVRALIRRKSESKST----------KLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW-----VFSDVLRSHIKNLRKKVDKGFK-KKIIHTVRGIGYVARD--
4 PsiBlast_PDB 79.2240%-104 - C5 -1YS7 PRRA_MYCTU A:[23-228] ----------------LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFV-LAELVARVKALLRRRGSTATSSSE-------TITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFA-DTNVVDVFIGYLRRKLEAG---PRLLHTVRGVGF------
6 PsiBlast_PDB 79.1136%-110 - C4 -4KNY KDPE_ECOLI A:[3-225] MANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSA-VPVIVLSARSEESDKIAALDAGADDYLSKPFG-IGELQARLRVALRRH------------APDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRF----
5 PsiBlast_PDB 78.8136%-110 - C4 -4KFC - KDPE_ECOLI A:[3-225] MANVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSA-VPVIVLSARSEESDKIAALDAGADDYLSKPFG-IGELQARLRVALRRHS-----------APDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITATGIGYRF----
3 PsiBlast_PDB 78.4040% -99 - C5 -1YS6 PRRA_MYCTU A:[23-228] ----------------LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR--VDDRVAGLEAGADDYLVKPFV-LAELVARVKALLRRRGSTATSSSE-------TITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAG-GGPRLLHTVRGVGF------
116 HHSearch 78.3344% -90 - C5 -2OQR REGX3_MYCTU A:[6-229] --SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRAR-SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYS-ARELIARIRAVLRRGGDDDSEM---S---DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE---
21 PsiBlast_CBE 77.6840% -90 - C5 -1YS7 PRRA_MYCTU B:[23-228] ----------------LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFV-LAELVARVKALLRRRGSTATSSSE-------TITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAG-G-PRLLHTVRGVGF------
22 PsiBlast_CBE 77.1340% -85 - C5 -1YS6 PRRA_MYCTU B:[23-228] ----------------LERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFV-LAELVARVKALLRRRGSTATSSSE-------TITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAG-GGPRLLHTVRGVGF------
20 PsiBlast_PDB 76.9333%-115 - C4 -1KGS ? A:[3-220] -VRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFD-LRELIARVRALIRRK----------SESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW-----VFSDVLRSHIKNLR-KKVDKGFKKKIIHTVRGIGY------
1 PsiBlast_PDB 76.7442% -87 - C5 -2OQR REGX3_MYCTU A:[6-229] --SVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRA-RSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYS-ARELIARIRAVLRRGG------DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE---
2 PsiBlast_PDB 74.7872%-117 - C4 -1MVO PHOP_BACSU A:[5-122] --KILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFS-PREVNARVKAILRRS--------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 66.2058%-110 - C4 -2ZWM YYCF_BACSU B:[4-119] --KILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRK-KYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFS-TRELLARVKANLRR---------------------------------------------------------------------------------------------------------------------
114 HHSearch 65.9925% -98 - C3 -2HQR - ? A:[1-217] -MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVMVS----DKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRFWGSN-------------VIEIGDLTISPDEEKIIYKGREVEVKGKPFEVLTHLARHRDQIVSKEQLLDAIWEEPEMVTPNVIEVAINQIRQKMDKPLG-ISTVETVRRRGYRFCYP-
12 PsiBlast_PDB 65.2261%-112 - C4 -1NXX - ? A:[3-119] --KILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDL----IDGLEVAKTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFS-NRELQARVKALLRRS--------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 65.0958%-110 - C4 -2ZWM YYCF_BACSU A:[4-119] --KILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRK-KYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFS-TRELLARVKANLRR---------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 64.9561%-102 - C4 -2A9P ? A:[3-118] --KILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTS-SVPILMLSAKDSEFDKVIGLELGADDYVTKPFS-NRELQARVKALLRR---------------------------------------------------------------------------------------------------------------------