@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2545: (2016-04-04 )
MRIRVPATTANLGPGFDSCGLALTLYLTLDIGAEADSWYIEHNIGGGIPHDETNVIIETALNLAPNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCALIAFIPKAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHLAQIRDVAKNQGAYAACLSGAGPTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR

Atome Classification :

(20 SA) --.........10----.-----------..-----...---.-.20--....-.-....30.-------.-..-.-...40...--.--------.-----.-----.----------.--50-........60......-----.---..70----.........80........90.......-----------------.100.......110......------.------120-----.--------..-......130--..---......140........--150---...--.--....160.----.-....-.-170....---------------------..------------------------------.---180.....-..190.......200.......210--......------.---220.........230..---....--.240....--...250.-----...-...260..-...-.----.270.......280......--------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --MRIRVPATTAN----L-----------GP-----GFD---S-CG---LALT-L-YLTLDIG-------A-EA-D-SWYIEHNI--G--------G-----G-----I----------P--HD-ETNVIIETA-LNLAPN-----L---TPH-----HLVMTCDIPPARGLGSSSAAVVAGIELA-----------------NTLAELNLSKEEKVRIAAEI------E------G-------H--------PD-NVAPAVLG---NW---VVGAKLDG-EDFYVRHL--F-P---DCA--L--IAFIPKAE----L-LTSE-S-RGVLPDT---------------------LP------------------------------F---KEAVQASS-IANVMIAAILRNDMTLAGEMMERDL--WHEKYR------S---Q--LVPHLAQIRDVAKN---QGAY--AACLSGAG--PTVLVFA-----PRN-LANKLQTS-LQT-L----EIDADVLLLDVEGSGAEVFR--------------
1 PsiBlast_PDB 98.6399%-133 - C1 -3HUL KHSE_LISMO A:[3-290] --LRIRVPATTAN----L-----------GP-----GFD---S-CG---LALT-L-YLTLDIG-------A-EA-D-SWYIEHNI--G--------G-----G-----I----------P--HD-ETNVIIETA-LNLAPN-----L---TPH-----HLVMTCDIPPARGLGSSSAAVVAGIELA-----------------NTLAELNLSKEEKVRIAAEI------E------G-------H--------PD-NVAPAVLG---NW---VVGAKLDG-EDFYVRHL--F-P----CA--L--IAFIPKAE----L-L----------PDT---------------------LP------------------------------F---KEAVQASS-IANVMIAAILRNDMTLAGEMMERDL--W-----------S---Q--LVPHLAQIRDVAKN---QGAY--AACLSGAG--PTVLVFA-----PRN-LANKLQTS-LQT-L----EIDADVLLLDVEGSGAEVFR--------------
18 HHSearch 98.1197%-133 - C1 -3HUL KHSE_LISMO A:[3-290] --LRIRVPATTAN----L-----------GP-----GFD---S-CG---LALT-L-YLTLDIG-------AEAD---SWYIEHNI--G--------G-----G-----I----------P--HD-ETNVIIETA-LNLAPN-----L---TPH-----HLVMTCDIPPARGLGSSSAAVVAGIELA-----------------NTLAELNLSKEEKVRIAAEI------E------G-------H--------PD-NVAPAVLG---NW---VVGAKLDG-ED-FYVRHL-F-P----CA--L--IAFIPKAE----L-L----------PDT---------------------LP------------------------------F---KEAVQASS-IANVMIAAILRNDMTLAGEMMERDL--W-----------S---Q--LVPHLAQIRDVAKN---QGAY--AACLSGAG--PTVLVFA-----PRN-LANKLQTS-LQT-L----EIDADVLLLDVEGSGAEVFR--------------
17 PsiBlast_CBE 94.7599%-131 - C1 -3HUL KHSE_LISMO B:[3-290] --LRIRVPATTAN----L-----------GP-----GFD---S-CG---LALT-L-YLTLDIG-------A-EA-D-SWYIEHNI----------------------------------P--HD-ETNVIIETA-LNLAPN-----L---TPH-----HLVMTCDIPPARGLGSSSAAVVAGIELA-----------------NTLAELNLSKEEKVRIAAEI------E------G-------H--------PD-NVAPAVLG---NW---VVGAKLDG-EDFYVRHL--F-P---DCA--L--IAFIPKAE----L-L----------PDT---------------------LP------------------------------F---KEAVQASS-IANVMIAAILRNDMTLAGEMMERDL--W--------------------PHLAQIRDVAKN---QGAY--AACLSGAG--PTVLVFA-----PRN-LANKLQTS-LQT-L----EIDADVLLLDVEGSGAEVFR--------------
19 HHSearch 69.8529% -96 - C1 -1H72 KHSE_METJA C:[3-295] --VRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLKEP-YDVIEVE-------AIDD-K-EIIIEVD---D--------K-----N-----I----------PT-DP-DKNVAGIVA-KKMIDDFNI--G---KGV-----KITIKKGVKAGSGLGSSAASSAGTAYAI-----------------NELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNYEP--LEVLHIP--I-DF--KLD--I--LIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD----KVY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LRD-Y------YENTIRTEV-GKGVEV----------------
43 Fugue 66.2728% -93 - C1 -1H74 KHSE_METJA A:[1-296] MKVRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLKEP-YDVIEVE-------A-ID-D-KEIIIEVD--D--------K-----N-----I----------P--TDPDKNVAGIVA-KKMIDD-----F---NIGKGV--KITIKKGVKAGSGLGSSAASSAGTAYAI-----------------NELFKLNLDKLKLVDYASYG------E------LASSGAK-H--------AD-NVAPAIFG---GF---TMVTNYEP-LEVLHIPI--D-F---KLD--I--LIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LRD-Y-------YENTIRTEVGKGVEVV---------------
42 Fugue 65.5928% -91 - C1 -1FWK KHSE_METJA A:[1-296] MKVRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLKEP-YDVIEVE-------A-ID-D-KEIIIEVD--D--------K-----N-----I----------P--TDPDKNVAGIVA-KKMIDD-----F---NIGKGV--KITIKKGVKAGSGLGSSAASSAGTAYAI-----------------NELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNYEP-LEVLHIPI--D-F---KLD--I--LIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD----KVY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LRD-Y-------YENTIRTEVGKGVEVV---------------
41 Fugue 64.8028% -91 * C1 *1H72 KHSE_METJA C:[1-296] MKVRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLKEP-YDVIEVE-------A-ID-D-KEIIIEVD--D--------K-----N-----I----------P--TDPDKNVAGIVA-KKMIDD-----F---NIGKGV--KITIKKGVKAGSGLGSSAASSAGTAYAI-----------------NELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNYEP-LEVLHIPI--D-F---KLD--I--LIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LRD-Y----YENTIRTEV---GKGVEVV---------------
44 Fugue 63.4526%-101 - C1 -1H72 KHSE_METJA C:[1-296] MKVRVKAPCTSAN----L-----------GV-----GFD----VFG---LCLKEP-YDVIEVE-------A-ID-D-KEIIIEVD--D--------K-----N-----I----------P--TD-PDKNVAGIV-AKKMID-----D---FN-IGKGVKITIKKGVKAGSGLGSSAASSAGTAYAI-----------------NELFKLNLDKLKLVDYASYGELASSGA------K-------H--------AD-NVAPAIFG---GF---TMVTNY----EPLEVLH--I-PIDFKLD--I--LIAIPN--ISINT-KEAR-E-I--LPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K---VYGITISGSG--PSIIAFP-----KEE-FIDEVENI-LRD-YYE----------------------NTIRTEVGKGVEVV
2 PsiBlast_PDB 61.2328% -94 - C1 -4RPF KHSE_YERPN A:[3-306] --VKIYAPASIGN----V-----------SV-----GFD---V-LG---AAVS-P-IDGTLLGDCVSVTAA-ER-F-SLHNEGRF--V--------S-----K-----L----------P--DDPKQNIVYQCW-ERFCQE-----MGKEIPV-----AMVLEKNMPIGSGLGSSACSVVAGLMAM-----------------NEFCGQPLDKVTLLGMMGEL------E------GRVSGSI-H--------FD-NVAPCYLG---GM---QL--ILEQ-EGYISQDVPGF-S---DWL--W--VMAYPGIK----V-STAE-A-RAILPAQ---------------------YR------------------------------R---QDCITHGR-NLAGFIHACHTQQPDLAAKMM-KDV--IAEPYR------T---Q--LLPGFAAARQAAQD---IGAL--ACGISGSG--PTLFAVCNDQATAQR-MAGWLQNHYLQN-D----EGFVHICRLDTAGA--------------------
29 HHSearch 59.6617%-107 - C1 -2CZ9 GAL1_PYRHO A:[2-350] --IKVKSPGRVNL----I-----------GEHTDYTYGY---V-MP---MAIN-L-YTKIEAE-------KHG----EVILYSEH--F--------GEERKFSLNDLRK----------E--NS-WIDYVKGIF-WVLKESDYE--V---GGI-----KGRVSGNLPLGAGLSSSASFEVGILETL-----------------DKLYNLKLDSLSKVLLAKKA------E------N-------EFVGVPCGILD-QF-AVVFGREGNV---IFLDTHTL---DYEYIP--FPK---DVS--I--LVFYTGVR---------SSE-YAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKF----------------------F---GYIVRENA-RVLEVRDALKEGNVEEVGKIL-TTA---HWDLA------KNYEV--SCKELDFFVERALK---LGAY--GARLTGAGFGGSAIALV-----DKE-DAETIGEE-ILREYLKRFPWKARHFIVEP-SDGVGI----------------
26 HHSearch 58.7020%-112 - C1 -2V8P ISPE_AQUAE A:[5-269] --IKVLSPAKINL----GLWVL-------GRLPS--GYHEILT-LY---QEIP-F-YDEIYIR-------EGV-----LRVETN---I--------------G-----I----------P---Q-EENLVYKGL-REFERITGI--E---INY-----SIFIQKNIPPGAGLGGGSSNLAVVLKKV-----------------NELLGSPLSEEELRELVGSI------S------A-------------------DAPFFLLG---KS---AIGRGKGE-V--LEPVE--TEI---SGK--I--TLVIPQVS----S-STGR-V-YSSLREE---------------------HF------------------------------V--------TPE-YAEEKIQRIISGEVEEIENVL-GDI--A-----------R---E--LYPEINEVYRFVEY---LG-F--KPFVSGSG--STVYFFG-----GAS-EE--LKKA-AKM-R------GWKVVEL-------------------------
36 HHSearch 57.5619% -93 - C1 -1KKH MVK_METJA A:[6-315] --MIIETPSKVIL----F-----------GEHAVVYGYR---A-IS---MAID-L-TSTIEIK-------ETQE-D-EIILNLND--LNKSLGLNLN-----E-----IKNIN------PNNFG-DFKYCLCAI-KNTLDYLNIEPK---TGF-----KINISSKIPISCGLGSSASITIGTIKAV-----------------SGFYNKELKDDEIAKLGYMV------E------KEIQGKASI--------TD--TSTITYK---GI---LEIKNNKFRKIKGEFEE--FLK---NCK--F--LIVYAEKRK---K-KTAE-L-VNEVAKI---------------------EN------------------------------K---DEIFKEI---DKVIDEALKIKNKEDFGKLM-TKN---HELLK------K---LNISTPKLDRIVDIGNR---FG-F--GAKLTGAGGGGCVIILV-----NEE-KEKELLKE-LNK-E------DVRIFNCRM-----------------------
6 PsiBlast_PDB 56.8726% -99 - C1 -1H72 KHSE_METJA C:[3-278] --VRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLK-EPYDVIEVE-------A-ID-D-KEII---------------------------I----------E--VD-DKNIPTDPD-KNVAGI-----V---AKK--------MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNY---EPLEVLHI--P-I---DFK--LDILIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LR-----------------------------------------
30 HHSearch 55.9818%-100 - C1 -2GS8 ? A:[9-316] --ITVTSYANIAI----IKYWGKENQAKMIP-----STS---S-IS---LTLENM-FTTTSVS-------FLPDTATSDQFYING--I--------------L-----Q----------N---D-EEHTKISAIIDQFRQPG----Q---AFV-----KMETQNNMPTAAGLSSSSSGLSALVKAC-----------------DQLFDTQLDQKALAQKAKFA------S------G-------S------------SSRSFFG---PV---AAWDKDSG-A--IYKVET-D-L---KMAMIM--LVLNAAKKP---ISSREG-M-KLCRDTS---------------------TT------------------------------F---DQWVEQSAIDYQHMLTYLKTNNFEKVGQLTEANALAMHATTKTANPPFS---Y--LTKESYQAMEAVKELRQEGFA--CYFTMDAG--PNVKVLC-----LEK-DLAQLAER-LGK-N-------YRIIVSKT-KDLPD-----------------
8 PsiBlast_PDB 55.8826% -98 - C1 -1H73 KHSE_METJA A:[3-278] --VRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLK-EPYDVIEVE-------A-ID-D-KEII---------------------------I----------E--VD-DKNIPTDPD-KNVAGI-----V---AKK--------MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNY---EPLEVLHI--P-I---DFK--LDILIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LR-----------------------------------------
7 PsiBlast_PDB 55.5326% -99 - C1 -1H74 KHSE_METJA A:[3-278] --VRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLK-EPYDVIEVE-------A-ID-D-KEII---------------------------I----------E--VD-DKNIPTDPD-KNVAGI-----V---AKK--------MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNY---EPLEVLHI--P-I---DFK--LDILIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LR-----------------------------------------
24 HHSearch 55.0318% -95 - C1 -1WUU GALK1_HUMAN A:[37-397] --LAVSAPGRVNL----I-----------GEHTDYNQGL---V-LP---MALE-L-MTVLVGS-------PRKD-G-LVSLLTTSEGADEP-----QRL---QFP---LPTAQRSLEPGT--PR-WANYVKGVI-QYYPAAP----L---PGF-----SAVVVSSVPLGGGLSSSASLEVATYTFL-----------------QQLCPDSGTIAARAQVCQQA------E------HSFAGMP-C--------GIMDQFISLMG---QKGHALLIDCRSL-ETSLVPLS--D-P---KLA--V--LITNSNVR----H---AS-SEYPVRRRQ---------------------CEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGEIR-RTAQAAAALRRGDYRAFGRLM-VES---HRSLRDDY---E---V--SCPELDQLVEAALAV--PGVY--GSRMTGGGFGGCTVTLL-----EAS-AAPHAMRH-IQEHY----GGTATFYLSQ-AADGAKVL---------------
20 HHSearch 54.9221% -94 - C1 -3PYF ISPE_MYCTU A:[6-300] --VTVRVPGKVNLYLAVG-----------DRRED--GYH---E-LTTVFHAVS-L-VDEVTVR-------NADV-L-SLELVGEG--A--------D-----Q-----L----------P--TD-ERNLAWQAA-ELMAEHVGR--A---PDV-----SIMIDKSIPVAGGMAGGSADAAAVLVAM-----------------NSLWELNVPRRDLRMLAARL------G------S-------------------DVPFALHG---GT---ALGTGRGE-E--LATVL--SRN---TFH--W--VLAFADSG----L-LTSA-V-YNELDRL---------------------RE------------------------------V---GD-PPRLG-EPGPVLAALAAGDPDQLAPLL-GNE--M-QAAA------V---S--LDPALARALRAGVE---AGAL--AGIVSGSG--PTCAFLC-----TSASSAIDVGAQ-LSG-A----GVCRTVRVATGPVPGARVV---------------
5 PsiBlast_PDB 54.8126% -99 - C1 -1FWL - KHSE_METJA A:[7-282] --VRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLK-EPYDVIEVE-------A-ID-D-KEII---------------------------I----------E--VD-DKNIPTDPD-KNVAGI-----V---AKK--------MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNY---EPLEVLHI--P-I---DFK--LDILIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LR-----------------------------------------
4 PsiBlast_PDB 54.6226% -96 - C1 -1FWK KHSE_METJA A:[3-278] --VRVKAPCTSAN----L-----------GV-----GFD---V-FG---LCLK-EPYDVIEVE-------A-ID-D-KEII---------------------------I----------E--VD-DKNIPTDPD-KNVAGI-----V---AKK--------MIDDFNIGKGV---KITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYG------ELASSGAK-------H--------AD-NVAPAIFG---GF---TMVTNY---EPLEVLHI--P-I---DFK--LDILIAIPNIS----I-NTKE-A-REILPKA---------------------VG------------------------------L---KDLVNNVG-KACGMVYALYNKDKSLFGRYMMSDK--VIEPVR------G---K--LIPNYFKIKEEVKD---K-VY--GITISGSG--PSIIAFP-----KEE-FIDEVENI-LR-----------------------------------------