@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2591: (2016-04-05 )
LDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQAFIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSKNLFGIKGTYKGKSVSMGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVDETDYRKALQAIKDGGYATDPDYVSKLVAIIERYNLDKYDVIYDKIESNQSLAAIGTVAENKKQEVIWSAPYNTENANKIGTLENYSGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDENVHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALQVDKKITRGGYAWFRISEGEKVIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYNNEKLEIVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTTAKEEPVKQVAYVKDPTAKLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDSQNSLGWIKAIDINS

Atome Classification :

(20 SA) --------.........10........20........30.-.......40........50-........60.......--------.70.....-...80...----.----.-.-..90...--.--....100.......----..110----.----.......120.....------..130--.----.-....-----.140..--.---------------....150.....------..160-...---....170.......180.......190.......200.......210..---.....220.......230-........----------------------240.......250..--..--...260.......270.......280...--.--...290.......300.......310.......320..-.....330.......340...----....350.---......360.......370.......380.......390.......400.......410.......420.......430....-...440....--...450.........460.......470....-...480....-------...490...-....500......-------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------LDRKFIKPGIILLIVAFLVVSINVGAETGGSR-TAQVNLTTSQQAFIDEILP-AAQDGYRDGKLLTSVTL--------AQAILESN-WGESGLSQ----N----S-K-NLFGIKG--T--YKGKS--VSMGTME----ASGS-----T----TANFRVYPSWKESIE------DHTAL--I----T-ENAR-----YQDAVD--E---------------TDYRKALQAIKD------GGYAT-DPD---YVSKLVAIIERYNLDKYDVIYDKIESNQSLAAIGTVAENKKQEVIWSAP---YNTENANKIGTLENYSG--RNLEISWE----------------------AKTEKGLWYFIRENN--KD--IGWINSNALKISYHQKEDENVHLTKYVDD--L--SAHVYRLPSPEKQFDNGTIAKYDRKALQVDKKITRGGY-AWFRISEGEKVIGWVRADKLN----DRLYDRIT---EQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPLADYNNEKLEIVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTTAKE-EPVKQVAYVK--DPTA--KLYNKPVESTSTNPKAVGFYYGKLLA-VDKTATILGE-------DWLHLKDSQ-NSLGWIKAIDINS-------------------------------------------------------------------------------------------
44 Fugue 78.1522% -31 - C5 -1M9S INLB_LISMO A:[3-596] ------ETITVSTPIKQIFPDDAFAETIKDNLKKKSVTDA-VTQNELNSIDQIIANNSDI-KSVQGIQYLPNVTKLFLNGNKLTDIKPLTNLKN-LGWLFLDE----N----KIK-DLSSLKD--L--KKLKS--LSLEHNGISDINGLV-----H----LPQLESLYLGNNKIT------DITVLSRL----T-KLDT-----LSLEDN--Q---------------ISDIVPLAGLTK------LQNLYLSKN---HISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNT----VKNTD---GSLVTPEIISDDGDYEK--PNVKWHLP----------------------EFTNEVSFIFYQPVT--IGKAKARFHGRVTQPLETTEKTVNLTRYVKYIR--G--NAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGGK-LWYRL----KNIGWTKAENLS----LDRYDKME---YDKGVTAYARVRNASGNSVWTKPYNTAGAKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNTFYKQSME-KPTRLTRYVSANKAGE--SYYKVPVADNPVKRGTLAKYKNQKLI-VDCQATIEGQ-------LWYRIRTSS-TFIGWTKAANLRAQ------------------------------------------------------------------------------------------
22 HHSearch 71.2347% -47 * C4 *3FI7 ? A:[24-183] --------------------------------------------ASTPTFQQTFINSIST-QAMDLCKKYNLYPSVMI--------AQAALESN-WGRSELGK----A----P-NYNLFGIKG--S--YNGKS--VTMKTWE----YSDSKGWYQI----NANFAKYPSHKESLE------DNAKK--L----R-NGPSWDSSYYKGAWRENA---------------KTYKD-ATAWLQ------GRYAT-DNT---YASKLNTLISSYNLTQYD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 70.2533% -62 - C5 -1M9S INLB_LISMO A:[361-595] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKTVNLTRYVKY--IRGNAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGGK-LWYRL----KNIGWTKAENLS----LDRYDKME---YDKGVTAYARVRNASGNSVWTKPYNTAGAKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNTFYKQSME-KPTRLTRYVS--ANKAGESYYKVPVADNPVKRGTLAKYKNQKLI-VDCQATIEGQ-------LWYRIRTSS-TFIGWTKAANLRA-------------------------------------------------------------------------------------------
2 PsiBlast_PDB 68.9642% -48 - C4 -3FI7 ? A:[22-183] ------------------------------------------ALASTPTFQQTFINSIST-QAMDLCKKYNLYPSVMI--------AQAALESN-WGRSELGK----A----P-NYNLFGIKG--S--YNGKS--VTMKTWE----YSDSKGWYQI----NANFAKYPSHKESLE------DNAKK--L----R-NGPS-----WDSSYY--K---------------GAWRENAKTYKDATAWLQGRYAT-DNT---YASKLNTLISSYNLTQYD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 63.9633% -43 - C4 -3VWO ? A:[2-143] ---------------------------------------------------QAFVDATWP-QAAKAAQSLGVPAHFLV--------AQAALETG-WGKSQIRN----KDGTPS-Y-NLFNIKAGSN--WTGKV--VEARTVE----YENG-----QRKVRVERFRAYDSYEQAFQ------DYADL--V----G-NSPR-----YAKVAG--K---------------TDGHAFARALQE------GGYAT-DPS---YADKLARVI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 Fugue 62.8831% -40 - C4 -2ZYC ? A:[2-164] --------------------------------------------------AQAFVDATWP-QAAKAAQSLGVPAHFLV--------AQAALETG-WGKSQIRNKDGTP----S-Y-NLFNIKA--GSNWTGKV--VEARTVK-------V-----R----VERFRAYDSYEQAFQ------DYADL--V----G-NSPR-----YAKVAG--K---------------TDGHAFARALQE------GGYAT-DPS---YADKLARVINGNALRQRLMASAASARGLE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 59.3634% -46 - C5 -1M9S INLB_LISMO A:[435-596] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKMEYDKGVTAYARVRNASG-NSVWTKP---YNTAGAKHVNKLSVYQG--KNMRILRE----------------------AKTPITTWYQFSIGG--KV--IGWVDTRALNTFYKQSMEKPTRLTRYVSANKA--GESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEGQ-LWYRIRTSSTFIGWTKAANLR----AQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50 Fugue 52.1519% -25 - C3 -4RNZ ? A:[1-369] --------MERLVWDK---LTLLGFLEKN-------HIPQ-KLYYNLSSQDKELSAEIQSNVTYYTLRDANN----TL--------IQALIP--------ISQ----D----------LQIHI--Y--KKGED--YFLDFIP----I-----------------------IFTRK------EKTLL--L----SLQTSP-----YQDIIK--A---------------TNDPLLANQLMN------AYKKS-VPFKRLVKNDKIAIVYTRDYRVGQAF------GQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVA------G--FLLETPVK----------------------YTRISSPFSYGRFHR--PH--YG--------VDYAAKHGSLIH------------SA------------SDGRVGFMGVKA----------GYGKVVEIHLNELRLVYAHMSAFA----NGL------------------------------------------------KKGSFVKK--------------GQIIGRVGSTGPHLHFGVYKNSRPINPLGYIR--TAKS--KLHG---KQREVFLEKAQRSKQKLEE-LLKTHSFEKN-------SFYLLE-------GFLEHHHH---------------------------------------------------------------------------------------------
20 PsiBlast_PDB 50.7525% -20 - C4 -4U1Y - GRIA2_RAT A:[106-305] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INV----------------------KERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 50.4525% -7 - C4 -4U2Q - GRIA2_RAT A:[106-312] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVG--------------------KKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49 Fugue 50.4216% 1 - C2 -4XVK DPOLN_HUMAN A:[1-666] KKHFCDIRHLDDWAKSQLIEMLKQAAALVITVMYTDGSTQLGADQTPVSSVRGIVVLVKR-QACGPVLEGFVSDDPCI--------YIQIEHSAIWDQEQEAH----Q----Q-F-ARNVLFQ--T--MKCKCPVICFNAKD----FVRI-----V----LQFFGNDGSWKHVADFIGLDPRIAAW--LIDPSD-ATPS-----FEDLVE--KYCEKSITVKVNSTYGNSSRNIVNQNVR------ENLKT-LYR---LTMDLCSKLKDYGL---WQLFRTLEL--PLIPILAVMESHAIQV---------NKEEMEKTSAL--LGA--RLKELEQE----------------------AHFVAGERFLITSNNQLRE--ILFGKLKLHLLSYPSTSEAVLNALRDLH-------------PLPKIILEYRQVHKIKSTFVDGLLACMKKGS-ISSTWNQTGTVTGRLSAKHPNIQGISKHPIQITTPKKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLS--GDPELLKLDDVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYG-AGKERLAACL--GVPI--QEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ
6 PsiBlast_PDB 49.6925% -12 - C4 -4U5E - ? A:[106-311] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKGERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 49.3925% -16 - C4 -4UQK - ? A:[109-387] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 49.3525% -16 - C4 -4UQ6 - ? A:[109-387] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 49.3525% -11 - C4 -4U5B - GRIA2_RAT A:[106-311] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKGERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 49.2825% -15 - C4 -4UQJ - GRIA2_RAT A:[109-316] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 49.2325% -8 - C4 -4U5C - ? A:[106-300] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNI-----DETYRSLFQDLELKGERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 49.0525% -7 - C4 -4U4G - ? A:[106-285] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 48.9525% -15 - C4 -3KG2 - A:[106-274] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 48.5525% -7 - C4 -4U1X - ? A:[106-307] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PD---LKGALLSLIEYYQWDKFAYLYDSDRGLSTLQAVLDSAAEKKWQV---TA---INVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYII------AN--LGFTDGDLLKIQFGGAEVSGFQIVDYDDS--L-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------